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Abberton, M and Batley, J and Bentley, A and Bryant, J and Cai, H and Cockram, J and Oliveira, A C D and Cseke, L J and Dempewolf, H and Pace, C D and Edwards, D and Gepts, P and Greenland, A and Hall, A E and Henry, R and Hori, K and Howe, G T and Hughes, S and Humphreys, M and Lightfoot, D and Marshall, A and Mayes, S and Nguyen, H T and Ogbonnaya, F C and Ortiz, R and Paterson, A H and Tuberosa, R and Valliyodan, B and Varshney, R K and Yano, M (2016) Global agricultural intensification during climate change: a role for genomics. Plant Biotechnology Journal, 14 (04). 01-04. ISSN 1467-7644
Abebe, F and Zuo, A and Ann Wheeler, S and Bjornlund, H and van Rooyen, A and Pittock, J and Mdemu, M and Chilundo, M (2020) Irrigators’ willingness to pay for the adoption of soil moisture monitoring tools in South-Eastern Africa. International Journal of Water Resources Development (TSI). pp. 1-22. ISSN 0790-0627
Achari, S R and Mann, R C and Sharma, M and Edwards, J (2023) Diagnosis of Fusarium oxysporum f. sp. ciceris causing Fusarium wilt of chickpea using loop‑mediated isothermal amplification (LAMP) and conventional end‑point PCR. Scientific Reports (TSI), 13. pp. 1-10. ISSN 2045-2322
Agarwal, G and Garg, V and Kudapa, H and Doddamani, D and Pazhamala, L T and Khan, A W and Thudi, M and Lee, S H and Varshney, R K (2016) Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea. Plant Biotechnology Journal, 14 (07). pp. 1563-1577. ISSN 1467-7652
Agarwal, G and Sabbavarapu, M M and Singh, V K and Thudi, M and Sheelamary, S and Gaur, P M and Varshney, R K (2015) Identification of a non-redundant set of 202 in silico SSR markers and applicability of a select set in chickpea (Cicer arietinum L.). Euphytica. pp. 1-14. ISSN 1573-5060
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Akinlade, O J and Voss-Fels, K and Costilla, R and Kholova, J and Choudhary, S and Varshney, R K and Hickey, L T and Smith, M R (2022) Designing chickpea for a hotter drier world. Euphytica, 218. pp. 1-16. ISSN 1573-5060
Akuraju, V R and Ryu, D and Western, A W and Ian Young, R (2019) Towards estimating root‐zone soil moisture using surface multispectral and thermal sensing: A spectral and hydrometeorological dataset from the Dookie experiment site, Victoria, Australia. Hydrological Processes (TSI), 33 (14). pp. 2037-2043. ISSN 0885-6087
Amede, T and Auricht, C and Boffa, J M and Dixon, J and Mallawaarachchi, T and Rukuni, M and Teklewold-Deneke, T (2017) A farming system framework for investment planning and priority setting in Ethiopia. Technical Report. Australian Centre for International Agricultural Research (ACIAR), Canberra, Australia.
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Anitha, S and Tsusaka, T W and Kane-Potaka, J (2023) Do Millets Contribute to Food Safety Better than Maize and Other Staple Crops and Commodities? In: Pandemics and Innovative Food Systems. Food Biology Series, 1 . CRC Press, USA. ISBN 978-1-003-19122-3
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Anitha, V and Wightman, J and Rogers, D J (2005) Management of white grubs (Coleoptera: Scarabaeidae) on groundnut in southern India. International Journal of Pest Management, 51 (4). pp. 313-320. ISSN 0967-0874
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Arbelaez, J D and Tandayu, E and Reveche, M Y and Jarana, A and van Rogen, P and Sandager, L and Stolt, P and Ng, E and Varshney, R K and Kretzschmar, T and Cobb, J (2019) Methodology: ssb-MASS: a single seed-based sampling strategy for marker-assisted selection in rice. Plant Methods (TSI), 15(1) (78). pp. 1-11. ISSN 1746-4811
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Atieno, J and Li, Y and Langridge, P and Dowling, K and Brien, C and Berger, B and Varshney, R K and Sutton, T (2017) Exploring genetic variation for salinity tolerance in chickpea using image-based phenotyping. Scientific Reports, 7 (1300). pp. 1-11. ISSN 2045-2322
Avuthu, T and Sanivarapu, H and Prasad, K and Sharma, N and Sudini, H K and Yogendra, K (2024) Comparative metabolomics analysis reveals secondary cell wall thickening as a barrier to resist Aspergillus flavus infection in groundnut. Physiologia Plantarum (TSI), 176 (1). pp. 1-14. ISSN 0031-9317
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Garg, V and Chitikineni, A and Sharma, M and Ghosh, R and Samineni, S and Varshney, R K and Kudapa, H (2023) Transcriptome profiling reveals the expression and regulation of genes associated with Fusarium wilt resistance in chickpea (Cicer arietinum L.). The Plant Genome (TSI). 01-16. ISSN 1940-3372
Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224
Gartley, M L and George, B and Davidson, B and Malano, H M and Garg, K K (2009) Hydro-economic modelling of the Upper Bhima Catchment, India. In: 18th World IMACS / MODSIM Congress, 13-17 July 2009, Cairns, Australia.
Gaur, P M and Jukanti, A K and Samineni, S and Chaturvedi, S K and Basu, P S and Babbar, A and Jayalakshmi, V and Nayyar, H and Devasirvatham, V and Mallikarjuna, N and Krishnamurthy, L and Gowda, C L L (2013) Climate Change and Heat Stress Tolerance in Chickpea. In: Climate Change and Plant Abiotic Stress Tolerance. Wiley-VCH Verlag GmbH & Co, Weinheim, Germany, pp. 839-855. ISBN 9783527675265
Gaur, P M and Samineni, S and Thudi, M and Tripathi, S and Sajja, S and Jayalakshmi, V and Mannur, D M and Vijayakumar, A G and Ganga Rao, N V P R and Ojiewo, C O and Fikre, A and Kimurto, P and Kileo, R O and Girma, N and Chaturvedi, S K and Varshney, R K and Dixit, G P and Link, W (2019) Integrated breeding approaches for improving drought and heat adaptation in chickpea (Cicer arietinum L.). Plant Breeding (TSI). pp. 1-12. ISSN 01799541
Gaur, P M and Singh, M K and Samineni, S and Sajja, S and Jukanti, A K and Kamatam, S and Varshney, R K (2016) Inheritance of protein content and its relationships with seed size, grain yield and other traits in chickpea. Euphytica, 209. pp. 253-260. ISSN 1573-5060
Gaur, P M and et al, . (2009) Gene introgression in grain legumes. In: International Conference on Grain Legumes: Quality Improvement , Value Addition and Trade, 14-16 Feb 2009, Kanpur, India.
Getahun, T and Tesfaye, K and Fikre, A and Haileslassie, T and Chitikineni, A and Thudi, M and Varshney, R K (2021) Molecular Genetic Diversity and Population Structure in Ethiopian Chickpea Germplasm Accessions. Diversity (TSI), 13 (6). pp. 1-15. ISSN 1424-2818
Gezahegn, A and Selassie, Y G and Agegnehu, G and Addisu, S and Mihretie, F A and Kohira, Y and Lewoyehu, M and Sato, S (2024) Sustainable weed management and soil enrichment with water hyacinth composting and mineral fertilizer integration. Environmental Challenges, 16. pp. 1-13. ISSN 2667-0100
Gezahegn, A and Selassie, Y G and Agegnehu, G and Addisu, S and Mihretie, F A and Kohira, Y and Lewoyehu, M and Sato, S (2024) The impact of water hyacinth biochar on maize growth and soil properties: The influence of pyrolysis temperature. Journal of Sustainable Agriculture and Environment, 3 (3). pp. 1-15. ISSN 2767-035X
Gezahegn, A and Selassie, Y G and Agegnehu, G and Addisu, S and Mihretie, F A and Kohira, Y and Sato, S (2024) Pyrolysis temperature changes the physicochemical characteristics of water hyacinth-based biochar as a potential soil amendment. Biomass Conversion and Biorefinery. ISSN 2190-6815
Ghosh, S and Mahadevaiah, S S and Gowda, S A and Gangurde, S S and Jadhav, M P and Hake, A A and Latha, P and Anitha, T and Chimmad, V P and Mirajkar, K K and Sharma, V and Pandey, M K and Shirasawa, K and Nayak, S N and Varshney, R K and Bhat, R S (2022) Genetic mapping of drought tolerance traits phenotyped under varying drought stress environments in peanut (Arachis hypogaea L.). Euphytica, 218. 01-15. ISSN 1573-5060
Ghosh, S and Palika, R and Dasi, T and Varshney, R K and Parasannanavar, D J and Gupta, S S and Chitikineni, A and Banjara, S K and Pullakhandam, R and Thomas, T and Sachdev, H S and Kurpad, A V and Kulkarni, B (2023) Haemoglobin diagnostic cut-offs for anaemia in Indian women of reproductive age. European Journal of Clinical Nutrition, 77. pp. 966-971. ISSN 1476-5640
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Gleason, S M and Barnard, D M and Green, T R and Mackay, S and Wang, D R and Ainsworth, E A and Altenhofen, J and Brodribb, T J and Cochard, H and Comas, L H and Cooper, M and Creek, D and DeJonge, K C and Delzon, S and Fritschi, F B and Hammer, G and Hunter, C and Lombardozzi, D and Messina, C D and Ocheltree, T and Stevens, B M and Stewart, J J and Vadez, V and Wenz, J and Wright, I J and Yemoto, K and Zhang, H (2022) Physiological trait networks enhance understanding of crop growth and water use in contrasting environments. Plant, Cell & Environment, 45. pp. 2554-2572. ISSN 1365-3040
Godwin, I D and Rutkoski, J and Varshney, R K and Hickey, L T (2019) Technological perspectives for plant breeding. Theoretical and Applied Genetics (TSI), 132 (3). pp. 555-557. ISSN 0040-5752
Gopalakrishnan, S and Watanabe, T and Pearse, S J and Ito, O and Hossain, Z A K M and Subbarao, G V (2009) Biological nitrification inhibition by Brachiaria humidicola roots varies with soil type and inhibits nitrifying bacteria, but not other major soil microorganisms. Soil Science and Plant Nutrition, 55 (5). pp. 725-733.
Gowda, C L L and Gaur, P M and Saxena, K B and Ali, M and Bashir, M and Rahman, A and Neupane, R K and Xuxiao, Z and Than, Aung May and Samartunga, H and Daba, K and Knights, E J (2004) Future research priorities for chickpea and pigeonpea improvement. International Chickpea and Pigeonpea Newsletter, 11. pp. 3-5. ISSN 1023-861
Gowda, C L L and Gaur, P M and Saxena, K B and Ali, M and Bashir, M and Rahman, A and Neupane, R K and Xuxiao, Z and Than, Aung May and Samartunga, H and Daba, K and Knights, E J and Warkentin, T (2004) Chickpea and Pigeonpea Meetings. International Chickpea and Pigeonpea Newsletter, 11. pp. 1-5.
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Graham, R D and Welch, R M and Saunders, D A and Ortiz-Monasterio, I and Bouis, H E and Bonierbale, M and Haan, S de and Burgos, G and Thiele, G and Liria, R and Meisner, C A and Beebe, S E and Potts, M J and Kadian, M and Hobbs, P R and Gupta, R K and Twomlow, S J (2007) Nutritious subsistence food systems. Advances in Agronomy , 92. pp. 1-74. ISSN 0065-2113
Grotelüschen, K and Gaydon, D S and Langensiepen, M and Ziegler, S and Kwesiga, J and Senthilkumar, K and Whitbread, A M and Becker, M (2021) Assessing the effects of management and hydro-edaphic conditions on rice in contrasting East African wetlands using experimental and modelling approaches. Agricultural Water Management (TSI), 258. pp. 1-14. ISSN 0378-3774
Grzywacz, D and Richards, A and Rabindra, R J and Saxena, H and Rupela, O P (2005) Efficacy of biopesticides and natural plant products for Heliothis/Helicoverpa control. In: Heliothis/Helicoverpa management: emerging trends and strategies for future research. Oxford & IBH Publishing Co. Pvt. Ltd., New Delhi, pp. 371-389. ISBN 81-204-1650-3
Guerra-García, A and Trněný, O and Brus, J and Renzi, J P and Kumar, S and Bariotakis, M and Coyne, C J and Chitikineni, A and Bett, K E and Varshney, R K and Pirintsos, S and Berger, J and Wettberg, E J B V and Smýkal, P (2024) Genetic structure and ecological niche space of lentil’s closest wild relative, Lens orientalis (Boiss.) Schmalh. Plant Biology (TSI), 26 (2). pp. 232-244. ISSN 1435-8603
Halder, U and Biswas, R and Kabiraj, A and Deora, R and Let, M and Roy, R Kr and Chitikineni, A and Majhi, K and Sarkar, S and Dutta, B and Laha, A and Datta, A and Khan, D and Varshney, R K and Saha, D and Chattopadhyay, S and Bandopadhyay, R (2022) Genomic, morphological, and biochemical analyses of a multi‑metal resistant but multi‑drug susceptible strain of Bordetella petrii from hospital soil. Scientific Reports (TSI), 12. 01-13. ISSN 2045-2322
Halder, U and Biswas, R and Shaw, R and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Genome-based characterization of the deep-sea psychrotolerant bacterium Bacillus altitudinis SORB11 isolated from the Indian Sector of the Southern Ocean. Polar Biology. ISSN 1432-2056
Hammer, G L and McLean, G and Kholova, J and Oosterom, E van (2023) Modelling the dynamics and phenotypic consequences of tiller outgrowth and cessation in sorghum. in silico Plants, 5 (2). pp. 1-14. ISSN 2517-5025
Hash, C T and Sharma, A and Kolesnikova-Allen, M A and Singh, S D and Thakur, R P and Raj, A G B and Rao, M N V R and Nijhawan, D C and Beniwal, C R and Sagar, P and Yadav, H P and Yadav, Y P and Srikant, - and Bhatnagar, S K and Khairwal, I S and Howarth, C J and Cavan, G P and Gale, M D and Leu, C and Devos, K M and Breese, W A and Witcombe, J R (2006) Teamwork delivers biotechnology products to Indian small-holder crop-livestock producers: Pearl millet hybrid “HHB 67 Improved” enters seed delivery pipeline. Journal of SAT Agricultural Research, 2 (1). pp. 1-3. ISSN 0973-3094
Herrero, M and Thornton, P K and Notenbaert, A M and Wood, S and Msangi, S and Freeman, H A and Bossio, D and Dixon, J and Peters, M and Steeg, J V D and Lynam, J and Rao, P P and Macmillan, S and Gerard, B and McDermott, J and Seré, C and Rosegrant, M (2010) Smart Investments in Sustainable Food Production: Revisiting Mixed Crop-Livestock Systems. Science, 327 (5967). pp. 822-825. ISSN 1095-9203
Hill, D and McWhinnie, S F and Kumar, S and Gregg, D (2022) Technology Heterogeneity and Poverty Traps: A Latent Class Approach to Technology Gap Drivers of Chronic Poverty. The Journal of Development Studies, 59 (2). pp. 224-241. ISSN 0022-0388
Homann-Kee Tui, S and Masikati, P and Dube, T and Voil, P D and Rodriguez, D and Van Rooyen, A F (2015) Co‐designing the transitions towards integrated market oriented mixed farming systems in semi‐arid Zimbabwe. In: Tropical Agriculture Conference 2015: Meeting the Productivity Challenge in the Tropics, November 16 - 18, 2015, Brisbane Convention & Exhibition Centre, Australia.
Hong, Y and Pandey, M K and Liu, Y and Chen, X and Liu, H and Varshney, R K and Liang, X and Huang, S (2015) Identification and Evaluation of Single-Nucleotide Polymorphisms in Allotetraploid Peanut (Arachis hypogaea L.) Based on Amplicon Sequencing Combined with High Resolution Melting (HRM) Analysis. Frontiers in Plant Science, 06 (1068). 01-10. ISSN 1664-462X
Hossain, Z A K M and et al, . (2008) Detection, isolation and characterization of a root-exuded compound, methyl 3-(4-hydroxyphenyl) propionate, responsible for biological nitrification inhibition by sorghum (Sorghum bicolor). New Phytologist, 180 (2). pp. 442-451. ISSN 1469-8137
Huai, D and Wu, J and Xue, X and Hu, M and Zhi, C and Pandey, M K and Liu, N and Huang, L and Bai, D and Yan, L and Chen, Y and Wang, X and Kang, Y and Wang, Z and Jiang, H and Lei, Y and Varshney, R K and Liao, B (2023) Red fluorescence protein (DsRed2) promotes the screening efficiency in peanut genetic transformation. Frontiers in Plant Science (TSI), 14. 01-11. ISSN 1664-462X
Huai, D and Xue, X and Wu, J and Pandey, M K and Liu, N and Huang, L and Yan, L and Chen, Y and Wang, X and Wang, Q and Kang, Y and Wang, Z and Jiang, H and Varshney, R K and Liao, B and Lei, Y (2024) Enhancing peanut nutritional quality by editing AhKCS genes lacking natural variation. Plant Biotechnology Journal. pp. 1-3. ISSN 1467-7644
Huang, B E and Verbyla, K L and Verbyla, A P and Raghavan, C and Singh, V K and Gaur, P M and Leung, H and Varshney, R K and Cavanagh, C R (2015) MAGIC populations in crops: current status and future prospects. Theoretical and Applied Genetics, 128 (6). pp. 999-1017. ISSN 0040-5752
Huda, S and Sadras, V and Wani, S P and Mei, X (2011) Food Security and Climate Change in the Asia-Pacific Region: Evaluating Mismatch between Crop Development and Water Availability. International Journal of Bio-resource and Stress Management, 2 (2). pp. 137-144.
Hussain, B and Mohiddin, M A and Wani, S H and Murtaza, I and Ahmad, S and Mohammed, R and Rehman, M and Rana, A and Al-ashkar, I and Rahman, M A and Ditta, A and Sabagh, A E (2023) Characterization of Barley Genotypes and Their Biochemical Responses against Leaf Rust (Puccinia hordei) Disease under Cold Arid Environment. Polish Journal of Environmental Studies, 33 (1). pp. 185-195. ISSN 2083-5906
Hyman, G and Barona, E and Biradar, C and Guevara, E and Dixon, J and Beebe, S and Castano, S E and Alabi, T and Gumma, M K and Sivasankar, S and Rivera, O and Espinosa, H and Cardona, J (2016) Priority regions for research on dryland cereals and legumes. F1000 Research, 05 (885). 01-18. ISSN 2046-1402
Isha, I and Singh, S and Jha, U and Laxuman, C and Kudapa, H and Varshney, R K and Thudi, M (2024) Meta-QTL analysis enabled identification of candidate genes and haplotypes for enhancing biotic stress resistance in chickpea. Journal of Plant Biochemistry and Biotechnology. ISSN 0971-7811
Ishtiaque, A and Krupnik, T J and Krishna, V and Uddin, M N and Aryal, J P and Srivastava, A K and Kumar, S and Shahzad, M F and Bhatt, R and Gardezi, M and Bahinipati, C S and Nazu, S B and Ghimire, R and Anik, A R and Sapkota, T B and Ghosh, M and Subedi, R and Sardar, A and Uddin, K M Z and Khatri-Chhetri, A and Rahman, M S and Singh, B and Jain, M (2024) Overcoming barriers to climate-smart agriculture in South Asia. Nature Climate Change. pp. 1-3. ISSN 1758-6798
Jagadabhi, P S and Kaparaju, P and Väisänen, A and Rintala, J (2019) Effect of macro- and micro-nutrients addition during anaerobic mono-digestion of grass silage in leach-bed reactors. Environmental Technology (TSI), 40 (4). pp. 418-429. ISSN 0959-3330
Jaganathan, D and Thudi, M and Kale, S M and Azam, S and Roorkiwal, M and Gaur, P M and Kavi Kishor, P B and Nguyen, H and Sutton, T and Varshney, R K (2015) Genotyping-by-sequencing based intra-specific genetic map refines a ‘‘QTL -hotspot” region for drought tolerance in chickpea. Molecular Genetics and Genomics, 290 (2). pp. 559-571. ISSN 1617-4623
Jagustović, R and Papachristos, G and Zougmoré, R B and Kotir, J H and Kessler, A and Ouédraogo, M and Ritsema, C J and Dittmer, K M (2021) Better before worse trajectories in food systems? An investigation of synergies and trade-offs through climate-smart agriculture and system dynamics. Agricultural Systems (TSI), 190 (103131). pp. 1-15. ISSN 0308-521X
Jamedar, H V R and Gandham, P and Bajaj, P and Thati, S and Rao, V S and Varshney, R K and Saxena, R K (2024) Identification of superior haplotypes for seed protein content in pigeonpea (Cajanus cajan L.). Journal of Plant Biochemistry and Biotechnology, 33. pp. 178-188. ISSN 0971-7811
Jan, S and Kumar, S and Yousuf, M and Shafi, S and Majid, R and Khan, M A and Jeelani, F and Shikari, A B and Kaur, S and Kumar, S and Kalia, S and Singh, K and Prasad, M and Varshney, R K and Mir, R R (2023) Do diverse wheat genotypes unleash their biochemical arsenal differentially to conquer cold stress? A comprehensive study in the Western Himalayas. Physiologia Plantarum, 176 (1). ISSN 1399-3054
Jan, S and Rustgi, S and Barmukh, R and Shikari, A B and Leske, B and Bekuma, A and Sharma, D and Ma, W and Kumar, U and Kumar, U and Bohra, A and Varshney, R K and Mir, R R (2023) Advances and opportunities in unraveling cold-tolerance mechanisms in the world’s primary staple food crops. The Plant Genome. pp. 1-23. ISSN 1940-3372
Johansen, C and Bakr, M A and Islam, M S and Mondal, N A and Afzal, A and MacLeod, W J and Pande, S and Siddique, K H M (2008) Integrated crop management of chickpea in environments of Bangladesh prone to Botrytis grey mould. Field Crops Research, 108 (3). pp. 238-249. ISSN 0378-4290
Jones, E S and Breese, W A and Liu, C J and Singh, S D and Shaw, D S and Witcombe, J R (2002) Mapping quantitative trait Loci for resistance to downy mildew in pearl millet: field and glasshouse screens detect the same QTL. Crop Science, 42 (4). pp. 1316-1323.
Jose, A M and Tejaswi, A and Kokiladevi, E and Sharma, N and Yogendra, K (2024) Genome-Wide Identification of the Glycine-Rich RNA-Binding Protein Genes and Their Expression Analysis upon Aspergillus flavus Infection in Groundnut (Arachis hypogaea). Agronomy (TSI), 14. pp. 1-15. ISSN 2073-4395
Joshi, Pushpesh and Soni, P and Sharma, V and Manohar, S S and Kumar, Sampath and Sharma, Shailendra and Pasupuleti, J and Vadez, V and Varshney, R K and Pandey, M K and Puppala, N (2024) Genome-Wide Mapping of Quantitative Trait Loci for Yield-Attributing Traits of Peanut. Genes (TSI), 15. pp. 1-21. ISSN 2073-4425
Kaashyap, M and Ford, R and Kudapa, H and Jain, M and Edwards, D and Varshney, R K and Mantri, N (2018) Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea. Scientific Reports (TSI), 8 (1) (4855). pp. 1-19. ISSN 2045-2322
Kaashyap, M and Ford, R and Mann, A and Varshney, R K and Siddique, K H M and Mantri, N (2022) Comparative Flower Transcriptome Network Analysis Reveals DEGs Involved in Chickpea Reproductive Success during Salinity. Plants (TSI), 11 (3). pp. 1-20. ISSN 2223-7747
Kaashyap, M and Kaur, S and Ford, R and Edwards, D and Siddique, K H M and Varshney, R K and Mantri, N (2022) Comprehensive transcriptomic analysis of two RIL parents with contrasting salt responsiveness identifies polyadenylated and non-polyadenylated flower lncRNAs in chickpea. Plant Biotechnology Journal (TSI), 20 (7). pp. 1402-1416. ISSN 1467-7644
Kabiraj, A and Halder, U and Panja, A S and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Detailed genomic and biochemical characterization and plant growth promoting properties of an arsenic-tolerant isolate of Bacillus pacificus from contaminated groundwater of West Bengal, India. Biocatalysis and Agricultural Biotechnology (TSI), 52. ISSN 1878-8181
Kale, S M and Jaganathan, D and Roorkiwal, M and Thudi, M and Purushothaman, R and Praveenkumar, M and Krishnamurthy, L and Kavi Kishor, P B and Gaur, P M and Varshney, R K (2017) Fine mapping studies identified a 113 kb region within “QTL-hotspot_a” for seed weight and drought related traits in chickpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Kale, S M and Jaganathan, D and Ruperao, P and Chen, C and Punna, R and Kudapa, H and Thudi, M and Roorkiwal, M and Katta, M A V S K and Doddamani, D and Garg, V and Kavi Kishor, P B and Gaur, P M and Nguyen, H T and Batley, J and Edwards, D and Sutton, T and Varshney, R K (2015) Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.). Scientific Reports (15296). 01-14. ISSN 2045-2322
Kalema, E P and Akpo, E and Muricho, G and Ringo, J and Ojiewo, C O and Varshney, R K (2022) Mapping out market drivers of improved variety seed use: the case of sorghum in Tanzania. Heliyon (TSI), 8 (1). pp. 1-9. ISSN 2405-8440
Kamdar, J H and Jasani, M D and Chandrashekar, A B and Janila, P and Pandey, M K and Georrge, J J and Varshney, R K and Bera, S K (2022) Does improved oleic acid content due to marker-assisted introgression of ahFAD2 mutant alleles in peanuts alter its mineral and vitamin composition? Frontiers in Plant Science (TSI), 13. 01-14. ISSN 1664-462X
Kaoneka, S R and Saxena, R K and Singh, V K and Sameer Kumar, C V and Shimelis, H A and Varshney, R K (2017) Identification of genomic regions associated with the yield and related traits in pigeonpea (Cajanus cajan L. Millsp.). In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Karadi, A and Samineni, S and Sajja, S and Sharma, M and Thudi, M and Mallikarjuna, B P and Viswanatha, K P and Varshney, R K and Gaur, P M (2021) Molecular mapping of dry root rot resistance genes in chickpea (Cicer arietinum L.). Euphytica (TSI), 217 (6). pp. 1-13. ISSN 0014-2336
Katta, M A V S K and Khan, A W and Doddamani, D and Thudi, M and Varshney, R K (2015) NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data. PLOS One, 10 (10). pp. 1-9. ISSN 1932-6203
Keating, B A and Carberry, P S and Hammer, G L and Probert, M E and Robertson, M J and Holzworth, D and Huth, N I and Hargreaves, J N G and Meinke, H and Hochman, Z and McLean, G and Verburg, K and Snow, V and Dimes, J P and Silburn, M and Wang, E and Brown, S and Bristowc, K L and Asseng, S and Chapman, J and McCown, R L and Freebairn, D.M. and Smith, C.J. (2003) An overview of APSIM, a model designed for farming systems simulation. European Journal of Agronomy, 18 (3-4). pp. 267-288. ISSN 1161-0301
Kenis, M and Benelli, G and Biondi, A and Calatayud, P A and Day, R and Desneux, N and Harrison, R D and Kriticos, D and Rwomushana, I and Berg, J V D and Verheggen, F and Zhang, Y and Agboyi, L K and Ahissou, R B and Ba, M N and Bernal, J and Bueno, A F and Carrière, Y and Carvalho, G A and Chen, X X and Cicero, L and du Plessis, H and Early, R and Fallet, P and Fiaboe, K K M and Firake, D M and Goergen, G and Groot, A T and Guedes, R N C and Gupta, A and Hu, G and Huang, F N and Jaber, L R and Malo, E A and McCarthy, C B and Meagher, R L Jr and Mohamed, S and Sanchez, D M and Nagoshi, R N and Nègre, N and Niassy, S and Ota, N and Nyamukondiwa, C and Omoto, C and Palli, S R and Pavela, R and Ramirez-Romero, R and Rojas, J C and Subramanian, S and Tabashnik, B E and Tay, W T and Virla, E G and Wang, S and Williams, T and Zang, L and Zhang, L and Wu, K (2022) Invasiveness, biology, ecology, and management of the fall armyworm, Spodoptera frugiperda. Entomologia Generalis. pp. 1-55. ISSN 2363-7102
Khan, A W and Garg, V and Roorkiwal, M and Golicz, A A and Edwards, D and Varshney, R K (2020) Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement. Trends in Plant Science (TSI), 25 (2). pp. 148-158. ISSN 1360-1385
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
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Roorkiwal, M and Pandey, S and Thavarajah, D and Hemalatha, R and Varshney, R K (2021) Molecular Mechanisms and Biochemical Pathways for Micronutrient Acquisition and Storage in Legumes to Support Biofortification for Nutritional Security. Frontiers in Plant Science (TSI), 12 (682842). pp. 1-20. ISSN 1664-462X
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Ruperao, P and Bayer, P and Kenneth Chan, C K and Hayashi, S and Roorkiwal, M and Chitikineni, A and Sutton, T and Batley, J and Varshney, R K and Edwards, D (2017) Constructing improved chickpea genome assemblies using skimGBS. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
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Thudi, M and Palakurthi, R and Schnable, J C and Chitikineni, A and Dreisigacker, S and Mace, E and Srivastava, R K and Satyavathi, C T and Odeny, D and Tiwari, V K and Lam, H M and Hong, Y B and Singh, V K and Li, G and Xu, Y and Chen, X and Kaila, S and Nguyen, H and Sivasankar, S and Jackson, Scott A. and Close, T J and Shubo, W and Varshney, R K (2021) Genomic resources in plant breeding for sustainable agriculture. Journal of Plant Physiology (TSI), 257. pp. 1-18. ISSN 0176-1617
Thudi, M and Samineni, S and Li, W and Boer, M P and Roorkiwal, M and Yang, Z and Ladejobi, F and Zheng, C and Chitikineni, A and Nayak, S and He, Z and Valluri, V K and Bajaj, P and Khan, A W and Gaur, P M and Eeuwijk, F v and Mott, R and Xin, L and Varshney, R K (2023) Whole genome resequencing and phenotyping of MAGIC population for high resolution mapping of drought tolerance in chickpea. The Plant Genome (TSI). pp. 1-16. ISSN 1940-3372
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Tonapi, V A and Ryley, M J and Galea, V and Bhuiyan, S and Wearing, A (2003) Simple techniques for production of secondary conidia and ergot inoculation in sorghum. International Sorghum and Millets Newsletter, 44. pp. 97-99.
Torhan, S and Grady, C A and Ajibade, I and Galappaththi, E K and Hernandez, R R and Musah-Surugu, J I and Nunbogu, A M and Segnon, A C and Shang, Y and Ulibarri, N and Campbell, D and Joe, E T and Penuelas, J and Sardans, J and Shah, M A R and Team, G A M (2022) Tradeoffs and Synergies Across Global Climate Change Adaptations in the Food-Energy-Water Nexus. Earth's Future, 10. pp. 1-15. ISSN 2328-4277
Totin, E and Butler, J R and Sidibé, A and Partey, S T and Thornton, P K and Tabo, R (2018) Can scenario planning catalyse transformational change? Evaluating a climate change policy case study in Mali. Futures (TSI), 96. pp. 44-56. ISSN 00163287
Turner, N C and Colmer, T D and Quealy, J and Pushpavalli, R and Krishnamurthy, L and Kaur, J and Singh, G and Siddique, K H M and Vadez, V (2013) Salinity tolerance and ion accumulation in chickpea (Cicer arietinum L.) subjected to salt stress. Plant and Soil, 365 (1-2). pp. 347-361. ISSN 1573-5036
Twomlow, S J and Mugabe, F T and Mwale, M and Delve, R and Nanja, D and Carberry, P S and Howden, M (2008) Building adaptive capacity to cope with increasing vulnerability due to climatic change in Africa – A new approach. Physics and Chemistry of the Earth, Parts A/B/C, 33 (8-13). pp. 780-787. ISSN 1474-7065
Ulibarri, N and Ajibade, I and Galappaththi, E K and Joe, E T and Lesnikowski, A and Mach, K J and Musah-Surugu, J I and Alverio, G N and Segnon, A C and Siders, A R and Sotnik, G and Campbell, D and Chalastani, V I and Jagannathan, K and Khavhagali, V and Reckien, D and Shang, Y and Singh, C and Zommers, Z (2021) A global assessment of policy tools to support climate adaptation. Climate Policy, 22 (1). pp. 77-96. ISSN 1752-7457
Upadhyaya, H D (2015) Establishing core collections for enhanced use of germplasm in crop improvement. EKIN, Journal of Crop Breeding and Genetics, 1 (1). pp. 1-12.
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Gumma, M K and Irshad Ahmed, M and Manyasa, E O and Thimma Reddy, M and Singh, S K (2017) Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Australian Journal of Crop Science, 11 (4). pp. 424-437. ISSN 1835-2707
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Irshad Ahmed, M and Gumma, M K and Thimma Reddy, M and Singh, S K (2017) Sorghum germplasm from West and Central Africa maintained in the ICRISAT genebank: Status, gaps, and diversity. The Crop Journal, 5 (6). pp. 518-532. ISSN 22145141
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Gowda, C L L and Reddy, T M and Ramachandran, S (2015) Identification of Gaps in Pigeonpea Germplasm from East and Southern Africa Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 28 (2). pp. 180-188. ISSN 0971-8184
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Kumar, V and Gumma, M K and Ramachandran, S (2017) Geographical distribution of traits and diversity in the world collection of pearl millet [Pennisetum glaucum (L.) R. Br., synonym: Cenchrus americanus (L.) Morrone] landraces conserved at the ICRISAT genebank. Genetic Resources and Crop Evolution, 64 (6). pp. 1365-1381. ISSN 0925-9864
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Ramachandran, S and Kumar, V and Singh, S (2017) Characterization and genetic potential of African pearl millet named landraces conserved at the ICRISAT genebank. Plant Genetic Resources, 15 (5). pp. 438-452. ISSN 1479-2621
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Ahmed, M I (2016) Adaptation Pattern and Genetic Potential of Indian Pearl Millet Named Landraces Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 29 (2). pp. 97-113. ISSN 0971-8184
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Singh, S and Reddy, T M and Ahmed, M I (2015) Status and genetic diversity in pigeonpea germplasm from Caribbean and Central American regions at ICRISAT genebank. Plant Genetic Resources, 13 (03). 01-09. ISSN 1479-263X
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Ahmed, M I and Reddy, M T (2018) Latitudinal Adaptation of Flowering Response to Photoperiod and Temperature in the World Collection of Sorghum Landraces. Crop Science (TSI). ISSN 0011-183X
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Gumma, M K and Ahmed, M I and Thimma Reddy, M and Singh, S K (2016) Status, genetic diversity and gaps in sorghum germplasm from South Asia conserved at ICRISAT genebank. Plant Genetic Resources. pp. 1-12. ISSN 1479-2621
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Upadhyaya, N M and Rao, J V D K K and Dart, P J and Letham, D S (1991) Leaf curl syndrome of pigeonpea (Cajanus cajan (L.) Millsp.) is a systemic response to effective nodulation by the Rhizobium strain IC3342. Physiological and Molecular Plant Pathology, 38 (5). pp. 357-373. ISSN 0885-5765
Urfels, A and Mausch, K and Harris, D and McDonald, A J and Kishore, A and Singh, B and Halsema, G van and Struik, P C and Craufurd, P and Foster, T and Singh, V and Krupnik, T J (2023) Farm size limits agriculture’s poverty reduction potential in Eastern India even with irrigation-led intensification. Agricultural Systems (TSI), 207. pp. 1-12. ISSN 0308-521X
Vadez, V and Deshpande, S P and Kholova, J and Hammer, G L and Borrell, A K and Talwar, H S and Hash, C T (2011) Stay-green QTLs effects on water extraction, transpiration efficiency and seed yield depend on recipient parent background. Functional Plant Biology, 38 (7). pp. 553-566. ISSN 1445-4408
Vadez, V and Grondin, A and Chenu, K and Henry, A and Laplaze, L and Millet, E J and Carminati, A (2024) Crop traits and production under drought. Nature Reviews Earth & Environment, 5. pp. 211-225. ISSN 2662-138X
Vadez, V and Krishnamurthy, L and Hash, C T and Upadhyaya, H D and Borrell, A K (2011) Yield, transpiration efficiency, and water-use variations and their interrelationships in the sorghum reference collection. Crop and Pasture Science, 62 (8). pp. 645-655. ISSN 1836-5795
Vadez, V and Krishnamurthy, L and Serraj, R and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K and Turner, N C and Siddique, K H M (2007) Large variation in salinity tolerance in chickpea is explained by differences in sensitivity at the reproductive stage. Field Crops Research, 104 (1-3). pp. 123-129. ISSN 0378-4290
Vadez, V and Krishnamurthy, L and Thudi, M and Anuradha, C and Colmer, T D and Turner, N C and Siddique, K H M and Gaur, P M and Varshney, R K (2012) Assessment of ICCV 2 × JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTLs for seed yield and yield components. Molecular Breeding, 30 (1). pp. 9-21. ISSN 1572-9788
Vadez, V and Palta, J and Berger, J (2014) Developing drought tolerant crops: hopes and challenges in an exciting journey. Functional Plant Biology, 41 (11). ISSN 1445-4408
Vadez, V and Rashmi, M and Sindhu, K and Muralidharan, M and Pushpavalli, R and Turner, N C and Krishnamurthy, L and Gaur, P M and Colmer, T D (2012) Large number of flowers and tertiary branches, and higher reproductive success increase yields under salt stress in chickpea. European Journal of Agronomy, 41. pp. 42-51. ISSN 1161-0301
Valliyodan, B and Brown, A V and Wang, J and Patil, G and Liu, Y and Otyama, P I and Nelson, R T and Vuong, T and Song, Q and Musket, T A and Wagner, R and Marri, P and Reddy, S and Sessions, A and Wu, X and Grant, D and Bayer, P E and Roorkiwal, M and Varshney, R K and Liu, X and Edwards, D and Xu, D and Joshi, T and Cannon, S B and Nguyen, H T (2021) Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing. Scientific Data (TSI), 8 (1). pp. 1-9. ISSN 2052-4463
Valliyodan, B and Cannon, S B and Bayer, P E and Shu, S and Brown, A V and Ren, L and Jenkins, J and Chung, C Y L and Chan, T F and Daum, C G and Plott, C and Hastie, A and Baruch, K and Barry, K W and Huang, W and Patil, G and Varshney, R K and Hu, H and Batley, J and Yuan, Y and Song, Q and Stupar, R M and Goodstein, D M and Stacey, G and Lam, H M and Jackson, S A and Schmutz, J and Grimwood, J and Edwards, D and Nguyen, H T (2019) Construction and comparison of three reference‐quality genome assemblies for soybean. The Plant Journal (TSI), 100 (5). pp. 1066-1082. ISSN 0960-7412
Van Rooyen, A F and Moyo, M and Bjornlund, H and Dube, T and Parry, K and Stirzaker, R (2020) Identifying leverage points to transition dysfunctional irrigation schemes towards complex adaptive systems. International Journal of Water Resources Development (TSI). pp. 1-28. ISSN 0790-0627
Van Rooyen, A F and Ramshaw, P and Moyo, M and Stirzaker, R and Bjornlund, H (2017) Theory and application of Agricultural Innovation Platforms for improved irrigation scheme management in Southern Africa. International Journal of Water Resources Development, 33 (5). pp. 804-823. ISSN 0790-0627
Varshney, R K (2021) The Plant Genome special issue: Advances in genomic selection and application of machine learning in genomic prediction for crop improvement. The Plant Genome (TSI), 14 (3). pp. 1-4. ISSN 1940-3372
Varshney, R K and Balyan, H S and Langridge, P (2006) Wheat. In: Cereals and Millets. Genome Mapping and Molecular Breeding in Plants, 1 . Springer-Verlag , Berlin, Heidelberg, Germany, pp. 79-134. ISBN 978-3-540-34031-7
Varshney, R K and Bohra, A and Yu, J and Graner, A and Zhang, Q and Sorrells, M E (2021) Designing Future Crops: Genomics-Assisted Breeding Comes of Age. Trends in Plant Science (TSI), 26 (6). pp. 631-649. ISSN 1360-1385
Varshney, R K and Glaszmann, Jean-Christophe and Leung, H and Ribaut, J M (2010) More genomic resources for less-studied crops. Trends in Biotechnology, 28 (9). pp. 452-460. ISSN 0167-7799
Varshney, R K and Godwin, I D and Mohapatra, T and Jones, J D G and McCouch, S R (2019) A SWEET solution to rice blight. Nature Biotechnology (TSI), 37 (11). pp. 1280-1282. ISSN 1087-0156
Varshney, R K and Grosse, I and Hahnel, U and Siefken, R and Prasad, M and Stein, N and Langridge, P and Altschmied, L and Graner, A (2006) Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome. TAG Theoretical and Applied Genetics, 113 (2). pp. 239-250. ISSN 1432-2242
Varshney, R K and Hiremath, P J and Pazhamala, L T and Kashiwagi, J and Jayashree, B and Deokar, A A and Vadez, V and Xiao, Y and Srinivasan, R and Gaur, P M and Siddique, K H M and Town, C D and Hoisington, D A (2009) A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics, 10 (523). 18p. ISSN 1471-2164
Varshney, R K and Kudapa, H and Pazhamala, L T and Chitikineni, A and Thudi, M and Bohra, A and Gaur, P M and Janila, P and Fikre, A and Kimurto, P and Ellis, N (2015) Translational Genomics in Agriculture: Some Examples in Grain Legumes. Critical Reviews in Plant Sciences, 34 (1-3). pp. 169-194. ISSN 0735-2689
Varshney, R K and Langridge, P and Graner, A (2007) Application of Genomics to Molecular Breeding of Wheat and Barley. In: Advances in Genetics. Elsevier, Amsterdam, UK, pp. 121-155. ISBN 978-0-12-374621-4
Varshney, R K and Marcel, T C and Ramsay, L and Russell, J and Roder, M S and Stein, N and Waugh, R and Langridge, P and Niks, R E and Graner, A (2007) A high density barley microsatellite consensus map with 775 SSR loci. TAG Theoretical and Applied Genetics, 114 (6). pp. 1091-1103. ISSN 1432-2242
Varshney, R K and Murali Mohan, S and Gaur, P M and Ganga Rao, N V P R and Pandey, M K and Bohra, A and Sawargaonkar, S L and Gorantla, A and Kimurto, P.K. and Janila, P and Saxena, K B and Fikre, A and Sharma, M and Rathore, A and Pratap, A and Tripathi, S and Datta, S and Chaturvedi, S K and Mallikarjuna, N and Anuradha, G and Babber, A and Choudhary, A K and Mhase, M B and Bharadwaj, C and Mannur, D M and Harer, P N and Guo, B and Liang, X and Nadarajan, N and Gowda, C L L (2013) Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics. Biotechnology Advances, 31 (8). pp. 1120-1134. ISSN 0734-9750
Varshney, R K and Pandey, M K and Puppala, N (2017) Future Prospects for Peanut Improvement. In: The Peanut Genome. Compendium of Plant Genomes book series (CPG) . Springer, pp. 165-169. ISBN 978-3-319-63933-8
Varshney, R K and Paulo, M J and Grando, S and Eeuwijk, F A van and Keizer, L C P and Ceccarelli, S and Kilian, A and Baum, M and Graner, A (2012) Genome wide association analyses for drought tolerance related traits in barley (Hordeum vulgare L.). Field Crops Research, 126 (1). 171-180 . ISSN 0378-4290
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Varshney, R K and Singh, V K and Hickey, J M and Xun, X and Marshall, D F and Wang, J and Edwards, D and Ribaut, J M (2015) Analytical and Decision Support Tools for Genomics-Assisted Breeding. Trends in Plant Science. 01-10. ISSN 1360-1385 (In Press)
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Varshney, R K and Terauchi, R and McCouch, S R (2014) Harvesting the Promising Fruits of Genomics: Applying Genome Sequencing Technologies to Crop Breeding. PLoS Biology, 12 (6). pp. 1-8. ISSN 1544-9173
Varshney, R K and Thudi, M and Pandey, M K and Tardieu, F and Ojiewo, C O and Vadez, V and Whitbread, A M and Siddique, K H M and Nguyen, H T and Carberry, P S and Bergvinson, D (2018) Accelerating Genetic Gains in Legumes for the Development of Prosperous Smallholder Agriculture: Integrating Genomics, Phenotyping, Systems Modelling and Agronomy. Journal of Experimental Botany (TSI), 69 (13). pp. 3293-3312. ISSN 0022-0957
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Vishwakarma, H and Sharma, S and Panzade, K P and Kharate, P S and Kumar, A and Singh, N and Avashthi, H and Rangan, P and Singh, A K and Singh, A and Angadi, U B and Siddique, K H M and Singh, K and Singh, G P and Pandey, R and Yadav, R (2024) Genome-wide analysis of the class III peroxidase gene family in sesame and SiPRXs gene validation by expression analysis under drought stress. Plant Stress, 11. pp. 1-13. ISSN 2667-064X
Vishwakarma, M K and Kale, S M and Sriswathi, M and Naresh, T and Shasidhar, Y and Garg, V and Pandey, M K and Varshney, R K (2017) Genome-Wide Discovery and Deployment of Insertions and Deletions Markers Provided Greater Insights on Species, Genomes, and Sections Relationships in the Genus Arachis. Frontiers in Plant Science, 8 (2064). pp. 1-13. ISSN 1664-462X
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Wan, L and Lei, Y and Yan, L and Liu, Y and Pandey, M K and Wan, X and Varshney, R K and Fang, J and Liao, B (2020) Transcriptome and metabolome reveal redirection of flavonoids in a white testa peanut mutant. BMC Plant Biology (TSI), 20 (1). pp. 2-19. ISSN 1471-2229
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