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Kashiwagi, J and Krishnamurthy, L and Upadhyaya, H D and Krishna, H and Chndra, S and Vadez, V and Serraj, R (2005) Genetic variability of drought-avoidance root traits in the mini-core germplasm collection of chickpea (Cicer arietinum L.). Euphytica, 146 (3). pp. 213-222. ISSN 1573-5060
Babu, T K and Sharma, R and Thakur, R P and Upadhyaya, H D and Reddy, P N and Girish, A G (2015) Selection of Host Differentials for Elucidating Pathogenic Variation in Magnaporthe grisea Populations Adapted to Finger Millet (Eleusine coracana). Plant Disease, 99 (12). pp. 1784-1789. ISSN 0191-2917
Waliyar, F and et al, . (2006) Evaluation of new Aspergillus flavus resistant groundnut varieties for agronomic performance in multi-location on-farm trials in Andhra Pradesh, India. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Pande, S and Upadhyaya, H D and Rao, J N and Reddy, P L and Rao, P P (2005) Promotion of Integrated Disease Management of ICGV 91114, a dual-purpose, early maturing groundnut variety for rainfed areas. Information Bulletin No.68. Technical Report. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Kiran Babu, T and Sharma, R and Upadhyaya, H D and Reddy, P N and Deshpande, S P and Senthilvel, S and Sarma, N D R K and Thakur, R P (2013) Evaluation of genetic diversity in Magnaporthe grisea populations adapted to finger millet using simple sequence repeats (SSRs) markers. Physiological and Molecular Plant Pathology, 84. pp. 10-18. ISSN 0885-5765
Sharma, R and Girish, A G and Upadhyaya, H D and Humayun, P and Kiran Babu, T and Rao, V P and Thakur, R P (2013) Identification of blast resistance in a core collection of foxtail millet germplasm. Plant Disease. ISSN 0191-2917
Kiran Babu, T and Thakur, R P and Upadhyaya, H D and Reddy, P N and Sharma, R and Girish, A G and Sarma, N D R K (2013) Resistance to blast (Magnaporthe grisea) in a mini-core collection of finger millet germplasm. European Journal of Plant Pathology, 135 (2). pp. 299-311. ISSN 1573-8469
Kiran Babu, T (2011) Epidemiology, Virulence Diversity and Host-Plant Resistance in Blast [Magnaporthe grisea (Hebert) Barr.] of Finger Millet [Eleusine coracana (L.) Gaertn.]. PHD thesis, Acharya N G Ranga Agricultural University.
Aruna, R and Rao, D M and Sivaramakrishnan, S and Reddy, L J and Bramel, P and Upadhyaya, H D (2009) Efficiency of three DNA markers in revealing genetic variation among wild Cajanus species. Plant Genetic Resources, 7 (2). pp. 113-121.
Aruna, R and Rao, D M and Reddy, L J and Ramakrishnan, S S and Upadhyaya, H D (2007) Influence of pod maturity and level of domestication on biochemical components in wild and cultivated pigeonpea (Cajanus cajan). Annals of Applied Biology, 151 (1). pp. 25-32.
Waliyar, F and et al, . (2005) Management of Aflatoxins in groundnut in Southern India. In: Summary proceedings of the International peanut conference 2005 “Prospects and emerging opportunities for peanut quality and utilization technology”, 9-12 Jan 2005, Bangkok, Thailand..
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Kiran Babu, T and Thakur, R P and Reddy, R P and Upadhyaya, H D and Girish, A G and Sarma, N D R K (2012) Development of a Field Screening Technique and Identification of Blast Resistance in Finger Millet Core Collection. Indian Journal of Plant Protection, 40 (1). pp. 45-51. ISSN 0253-4355
Babu, T K and Sharma, R and Thakur, R P and Upadhyaya, H D and Reddy, P N and Girish, A G (2015) Selection of Host Differentials for Elucidating Pathogenic Variation in Magnaporthe grisea Populations Adapted to Finger Millet (Eleusine coracana). Plant Disease, 99 (12). pp. 1784-1789. ISSN 0191-2917
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Gopal, K and Jagadeswar, R and Prasad Babu, G and Upadhyaya, H D (2004) Sources of resistance to bud necrosis disease in groundnut. International Arachis Newsletter, 24. pp. 36-38. ISSN 1010-5824
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Dwivedi, S L and Puppala, N and Upadhyaya, H D and Manivannan, N and Singh, Sube (2008) Developing a core collection of peanut specific to Valencia market type. Crop Science, 48 (2). pp. 625-632.
Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Khedikar, Y and Pandey, M K and Sujay, V and Singh, S and Nayak, S N and Klein-Gebbinck, H W and Sarvamangala, C and Mukri, G and Garg, V and Upadhyaya, H D and Nadaf, H L and Gowda, M V C and Varshney, R K and Bhat, R S (2018) Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.). Molecular Breeding (TSI), 38(1) (7). pp. 1-12. ISSN 1380-3743
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Eker, T and Erler, F and Adak, A and Imrek, B and Guven, H and Tosun, H S and Sari, D and Sari, H and Upadhyaya, H D and Toker, C and Ikten, C (2018) Screening of chickpea accessions for resistance against the pulse beetle, Callosobruchus chinensis L. (Coleoptera: Bruchidae). Journal of Stored Products Research (TSI), 76. pp. 51-57. ISSN 0022474X
Eker, T and Erler, F and Adak, A and Imrek, B and Guven, H and Tosun, H S and Sari, D and Sari, H and Upadhyaya, H D and Toker, C and Ikten, C (2018) Screening of chickpea accessions for resistance against the pulse beetle, Callosobruchus chinensis L. (Coleoptera: Bruchidae). Journal of Stored Products Research (TSI), 76. pp. 51-57. ISSN 0022474X
Saha, D and Rana, R S and Arya, L and Verma, M and Gowda, M V C and Upadhyaya, H D (2017) Genetic polymorphisms among and between blast disease resistant and susceptible finger millet, Eleusine coracana (L.) Gaertn. Plant Genetic Resources, 15 (04). pp. 355-365. ISSN 1479-2621
Khairwal, I S and Yadav, S K and Rai, K N and Upadhyaya, H D and Kachhawa, D and Nirwan, B and Bhattacharjee, R and Rajpurohit, B S and Dangaria, C J and Srikant, - (2007) Evaluation and identification of promising pearl millet germplasm for grain and fodder traits. Journal of SAT Agricultural Research, 5 (1). pp. 1-6. ISSN 0973-3094
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Jarvis, A and Upadhyaya, H D and Gowda, C L L and Agrawal, P K and Fujisaka, S and Anderson, B (2008) Climate change and its effect on conservation and use of plant genetic resources for food and agriculture and associated biodiversity for food security. Monograph. Food and Agriculture Organization of the United Nations , UK.
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Upadhyaya, H D and Wang, L and Prakash, C S and Liu, Y and Gao, L and Meng, R and Seetharam, K and Gowda, C L L and Ganesamurthy, K and Singh, S K and Kumar, R and Li, J and Wang, Y (2022) Genome-wide association mapping identifies an SNF4 ortholog that impacts biomass and sugar yield in sorghum and sugarcane. Journal of Experimental Botany, 73 (11). pp. 3584-3596. ISSN 1460-2431
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Dwivedi, S L and Perotti, E and Upadhyaya, H D and Ortiz, R (2010) Sexual and apomictic plant reproduction in the genomics era: exploring the mechanisms potentially useful in crop plants. Sexual Plant Reproduction, 23 (4). pp. 265-279. ISSN 1432-2145
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Singh, Reema and Kumari, N and Upadhyaya, H D and Yadav, R and Vaishali, . and Choi, I and Kumar, R (2013) Molecular analysis for genetic structure of biotic and abiotic stress resistant genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology, 12 (4). pp. 537-540. ISSN 0975-0967
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
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Singh, Reema and Kumari, N and Upadhyaya, H D and Yadav, R and Vaishali, . and Choi, I and Kumar, R (2013) Molecular analysis for genetic structure of biotic and abiotic stress resistant genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology, 12 (4). pp. 537-540. ISSN 0975-0967
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Subbarao, G V and Hossain, Z A K M and Nakahara, K and Ishikawa, T and Yanbuaban, M and Yoshihashi, T and Ono, H and Mitsuru, Y and Hash, C T and Upadhyaya, H D and Srinivasa, P and Reddy, B V S and Ito, O and Sahrawat, K L (2009) Biological Nitrification Inhibition (BNI) Potential in Sorghum. In: The Proceedings of the International Plant Nutrition Colloquium XVI, Department of Plant Sciences, UC Davis, 2009, UC Davis,California,United States.
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
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Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
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Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141
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Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
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Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Dwivedi, S L and Upadhyaya, H D and Balaji, J and Buhariwalla, H K and Blair, M W and Ortiz, R and Crouch, J H and Serraj, R (2006) Using Genomics to Exploit Grain Legume Biodiversity in Crop Improvement. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 171-358. ISBN 978-0-471-73215-0
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Upadhyaya, H D and Thudi, M and Dronavalli, N and Gujaria, N and Singh, Sube and Sharma, S and Varshney, R K (2011) Genomic tools and germplasm diversity for chickpea improvement. Plant Genetic Resources : Characterization and Utilization, 9 (1). pp. 45-58.
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Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2011) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 121 (5). pp. 971-984.
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Bohra, A and Mallikarjuna, N and Saxena, K B and Upadhyaya, H D and Vales, I and Varshney, R K (2010) Harnessing the Potential of Crop Wild Relatives through Genomics Tools for Pigeonpea Improvement. Journal of Plant Biology, 37 (1). pp. 83-98.
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Glaszmann, J C and Billot, C and Arnaud, E and et al, . (2011) Core Reference Sets Of Sorghum And Musa : From A Whole Collection To A Mini Core Collection And Back. In: Plant & Animal Genomes XIX Conference, 15-19 January 2011, San Diego, CA .
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Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Kumar, S and Malik, J and Thakur, P and Kaistha, S and Sharma, K D and Upadhyaya, H D (2011) Growth and metabolic responses of contrasting chickpea (Cicer arietinum L.) genotypes to chilling stress at reproductive phase. Acta Physiologiae Plantarum, 33 (3). pp. 779-787.
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Pattanashetti, S K and Upadhyaya, H D and Motagi, B N and Kanatti, A and Boodi, I and Biradar, B D and Naidu, G K and Chimmad, V P (2015) Genetic Differences for Iron Absorption Efficiency Related Traits in Groundnut. In: 47th Annual Meeting of the American Peanut Research and Education Society (APRES), July 14-16, 2015, Francis Marion Hotel, Charleston, SC, USA.
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Kajjidoni, S T and Patil, S S (2013) Validation of Biometrical Principles for Genetic Enhancement of Chickpea (Cicer arietinum L.). Indian Journal of Plant Genetic Resources, 26 (3). pp. 207-214. ISSN 0976-1926
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Upadhyaya, H D and Sharma, S and Singh, Sube and Singh, Murari (2011) Inheritance of drought resistance related traits in two crosses of groundnut (Arachis hypogaea L.). Euphytica, 177 (1). pp. 55-66.
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Kashiwagi, J and Krishnamurthy, L and Purushothaman, R and Upadhyaya, H D and Gaur, P M and Gowda, C L L and Ito, O and Varshney, R K (2015) Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.). Field Crops Research, 170 (-). pp. 47-54. ISSN 1872-6852
Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Purushothaman, R and Dwivedi, S L and Vadez, V (2016) Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm. Crop and Pasture Science, 67 (8). pp. 834-846. ISSN 1836-0947
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Toker, C and Adak, A and Sari, D and Sari, H and Ceylan, F O and Canci, H and Ikten, C and Erler, F and Upadhyaya, H D (2019) Registration of AWC 612M Chickpea Mutant Germplasm Line Resistant to Leaf Miner (Liriomyza cicerina). Journal of Plant Registrations (TSI), 13 (1). pp. 87-90. ISSN 1936-5209
Toker, C and Adak, A and Sari, D and Sari, H and Ceylan, F O and Canci, H and Ikten, C and Erler, F and Upadhyaya, H D (2019) Registration of AWC 612M Chickpea Mutant Germplasm Line Resistant to Leaf Miner (Liriomyza cicerina). Journal of Plant Registrations (TSI), 13 (1). pp. 87-90. ISSN 1936-5209
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Dwivedi, S L and Ceccarelli, S and Blair, M W and Upadhyaya, H D and Ashok Kumar, A and Ortiz, R (2016) Landrace Germplasm for Improving Yield and Abiotic Stress Adaptation. Trends in Plant Science, 21 (01). pp. 31-42. ISSN 1360-1385
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea. Functional Plant Biology, 44. pp. 235-252. ISSN 1445-4408
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Irshad Ahmed, M and Gumma, M K and Thimma Reddy, M and Singh, S K (2017) Sorghum germplasm from West and Central Africa maintained in the ICRISAT genebank: Status, gaps, and diversity. The Crop Journal, 5 (6). pp. 518-532. ISSN 22145141
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Ramachandran, S and Kumar, V and Singh, S (2017) Characterization and genetic potential of African pearl millet named landraces conserved at the ICRISAT genebank. Plant Genetic Resources, 15 (5). pp. 438-452. ISSN 1479-2621
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Kumar, V and Gumma, M K and Ramachandran, S (2017) Geographical distribution of traits and diversity in the world collection of pearl millet [Pennisetum glaucum (L.) R. Br., synonym: Cenchrus americanus (L.) Morrone] landraces conserved at the ICRISAT genebank. Genetic Resources and Crop Evolution, 64 (6). pp. 1365-1381. ISSN 0925-9864
Upadhyaya, H D and Reddy, K N and Pattanashetti, S K and Kumar, V and Ramachandran, S (2017) Identification of promising sources for fodder traits in the world collection of pearl millet at the ICRISAT genebank. Plant Genetic Resources (TSI). pp. 1-10. ISSN 1479-2621
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Gumma, M K and Irshad Ahmed, M and Manyasa, E O and Thimma Reddy, M and Singh, S K (2017) Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Australian Journal of Crop Science, 11 (4). pp. 424-437. ISSN 1835-2707
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.). Field Crops Research, 201. pp. 146-161. ISSN 03784290
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2016) Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.). Field Crops Research, 197 (-). pp. 10-27. ISSN 03784290
Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Purushothaman, R and Dwivedi, S L and Vadez, V (2016) Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm. Crop and Pasture Science, 67 (8). pp. 834-846. ISSN 1836-0947
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Gumma, M K and Ahmed, M I and Thimma Reddy, M and Singh, S K (2016) Status, genetic diversity and gaps in sorghum germplasm from South Asia conserved at ICRISAT genebank. Plant Genetic Resources. pp. 1-12. ISSN 1479-2621
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Ahmed, M I (2016) Adaptation Pattern and Genetic Potential of Indian Pearl Millet Named Landraces Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 29 (2). pp. 97-113. ISSN 0971-8184
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Singh, S and Reddy, T M and Ahmed, M I (2015) Status and genetic diversity in pigeonpea germplasm from Caribbean and Central American regions at ICRISAT genebank. Plant Genetic Resources, 13 (03). 01-09. ISSN 1479-263X
Sudini, H and Upadhyaya, H D and Reddy, S V and Naga Mangala, U and Rathore, A and Vijay Krishna Kumar, K (2015) Resistance to late leaf spot and rust diseases in ICRISAT’s mini core collection of peanut (Arachis hypogaea L.). Australasian Plant Pathology, 44 (5). pp. 557-566. ISSN 0815-3191
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Lalitha, N and Upadhyaya, H D and Krishnamurthy, L and Kashiwagi, J and Kavi Kishor, P B and Singh, S (2015) Assessing Genetic Variability for Root Traits and Identification of Trait-Specific Germplasm in Chickpea Reference Set. Crop Science, 55 (-). 01-12. ISSN 1435-0653
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Gowda, C L L and Reddy, T M and Ramachandran, S (2015) Identification of Gaps in Pigeonpea Germplasm from East and Southern Africa Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 28 (2). pp. 180-188. ISSN 0971-8184
Babu, T K and Sharma, R and Thakur, R P and Upadhyaya, H D and Reddy, P N and Girish, A G (2015) Selection of Host Differentials for Elucidating Pathogenic Variation in Magnaporthe grisea Populations Adapted to Finger Millet (Eleusine coracana). Plant Disease, 99 (12). pp. 1784-1789. ISSN 0191-2917
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Upadhyaya, H D (2015) Establishing core collections for enhanced use of germplasm in crop improvement. EKIN, Journal of Crop Breeding and Genetics, 1 (1). pp. 1-12.
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Opole, R A and Prasad, P V V and Djanaguiraman, M and Vimala, K and Kirkham, M B and Upadhyaya, H D (2018) Thresholds, sensitive stages and genetic variability of finger millet to high temperature stress. Journal of Agronomy and Crop Science (TSI), 204 (5). pp. 477-492. ISSN 09312250
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Falalou, H and Sani, M A and Hassane, Y B and Falke, B A and Upadhyaya, H D (2017) Abiotic Stresses Tolerance and Nutrients Contents in Groundnut, Pearl Millet and Sorghum Mini Core Germplasm for Food and Nutrition Security. Indian Journal of Plant Genetic Resources, 30 (3). pp. 201-209. ISSN 0971-8184
Hamidou, F and Heynikoye, M and Halilou, O and Upadhyaya, H D and Vadez, V (2017) Drought (WS) and low phosphorus (LP) stress in groundnut: Water extraction pattern and tolerance related traits for breeding program. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Wang, Y H and Upadhyaya, H D and Dweikat, I (2016) Sorghum. In: Genetic and Genomic Resources for Grain Cereals Improvement (eds. Singh, M. and Upadhyaya H.D.). Academic Press, Elsevier, USA, 227 -251. ISBN 978-0-12-802000-5
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Bhagyawant, S S and Gautam, A K and Narvekar, D T and Gupta, N and Bhadkaria, A and Srivastava, N and Upadhyaya, H D (2018) Biochemical diversity evaluation in chickpea accessions employing mini-core collection. Physiology and Molecular Biology of Plants (TSI). pp. 1-19. ISSN 0971-5894
Khedikar, Y and Pandey, M K and Sujay, V and Singh, S and Nayak, S N and Klein-Gebbinck, H W and Sarvamangala, C and Mukri, G and Garg, V and Upadhyaya, H D and Nadaf, H L and Gowda, M V C and Varshney, R K and Bhat, R S (2018) Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.). Molecular Breeding (TSI), 38(1) (7). pp. 1-12. ISSN 1380-3743
Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Opole, R A and Prasad, P V V and Djanaguiraman, M and Vimala, K and Kirkham, M B and Upadhyaya, H D (2018) Thresholds, sensitive stages and genetic variability of finger millet to high temperature stress. Journal of Agronomy and Crop Science (TSI), 204 (5). pp. 477-492. ISSN 09312250
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Yol, E and Furat, S and Upadhyaya, H D and Uzun, B (2017) Characterization of groundnut (Arachis hypogaea L.) collection using quantitative and qualitative traits in the Mediterranean Basin. Journal of Integrative Agriculture, 16. pp. 1-12. ISSN 2095-3119
Yol, E and Upadhyaya, H D and Uzun, B (2016) Identification of rust resistance in groundnut using a validated SSR marker. Euphytica, 210. pp. 405-410. ISSN 0014-2336
Yol, E and Upadhyaya, H D and Uzun, B (2015) Validation of field resistance to late leaf spot by using a molecular marker in groundnut. In: International Plant Breeding Congress (IPBC) and Eucarpia – Oil And Protein Crops Section Conference, November 01 - 05, 2015, WOW Kremlin Palace Hotel, Antalya, Turkey.
Yol, E and Upadhyaya, H D and Uzun, B (2015) Molecular diagnosis to identify new sources of resistance to sclerotinia blight in groundnut (Arachis hypogaea L.). Euphytica, 203 (2). pp. 367-374. ISSN 1573-5060
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T and Patil, B C (2010) Characterization of drought tolerant accessions identified from the minicore of chickpea (Cicer arietinum L.). The Indian Journal of Genetics and Plant Breeding, 70 (2). pp. 125-131. ISSN 0019-5200
Khedikar, Y and Pandey, M K and Sujay, V and Singh, S and Nayak, S N and Klein-Gebbinck, H W and Sarvamangala, C and Mukri, G and Garg, V and Upadhyaya, H D and Nadaf, H L and Gowda, M V C and Varshney, R K and Bhat, R S (2018) Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.). Molecular Breeding (TSI), 38(1) (7). pp. 1-12. ISSN 1380-3743
Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic diversity analysis based on nutritional, oil quality and yield component traits in mini core collection of groundnut (Arachis hypogaea L.). Karnataka Journal of Agricultural Sciences, 27 (02). pp. 219-221. ISSN 0972-1061
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Mukri, G and Nadaf, H L and Bhat, R S and Gowda, M V C and Upadhyaya, H D and Sujay, V (2012) Phenotypic and molecular dissection of ICRISAT mini core collection of peanut (Arachis hypogaea L.) for high oleic acid. Plant Breeding. 5 pp.. ISSN 1439-0523
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Basu, U and Narnoliya, L and Srivastava, R and Sharma, A and Bajaj, D and Daware, A and Thakro, V and Malik, N and Upadhyaya, H D and Tripathi, S and Hegde, V S and Tyagi, A K and Parida, S K (2019) CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics (TSI), 132 (7). pp. 2017-2038. ISSN 0040-5752
Basu, U and Upadhyaya, H D and Srivastava, R and Daware, A and Malik, N and Sharma, A and Bajaj, D and Narnoliya, L and Thakro, V and Kujur, A and Tripathi, S and Bharadwaj, C and Hegde, V S and Pandey, A K and Singh, A K and Tyagi, A K and Parida, S K (2019) ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea. Plant Physiology (TSI), 180 (1). pp. 253-275. ISSN 0032-0889
Narnoliya, L and Basu, U and Bajaj, D and Malik, N and Thakro, V and Daware, A and Sharma, A and Tripathi, S and Hegde, V S and Upadhyaya, H D and Singh, A K and Tyagi, A K and Parida, S K (2019) Transcriptional signatures modulating shoot apical meristem morphometric and plant architectural traits enhance yield and productivity in chickpea. The Plant Journal (TSI), 98 (5). pp. 864-883. ISSN 0960-7412
Upadhyaya, H D and Bajaj, D and Srivastava, R and Daware, A and Basu, U and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics. pp. 1-13. ISSN 1438-793X
Shimray, P W and Bajaj, D and Srivastava, R and Daware, A and Upadhyaya, H D and Kumar, R and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter. pp. 1-13. ISSN 0735-9640
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic analysis for yield, nutritional and oil quality traits in RIL population of groundnut (Arachis hypogaea L.). Indian Journal of Genetics and Plant Breeding, 74 (4). pp. 450-455. ISSN 0019-5200
Dwivedi, S L and Gurtu, S and Chndra, S and Upadhyaya, H D and Nigam, S N (2003) AFLP diversity among selected rosette resistant groundnut germplasm. International Arachis Newsletter (23). pp. 21-23. ISSN 1010-5824
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Varshney, R K and Parzies, H K (2014) Population structure and linkage disequilibrium of ICRISAT foxtail millet (Setaria italica (L.) P. Beauv.) core collection. Euphytica, 196 (3). pp. 423-435. ISSN 1573-5060
Dwivedi, S L and Upadhyaya, H D and Hegde, D M (2005) Development of Core Collection using Geographic Information and Morphological Descriptors in Safflower (Carthamus tinctorius L.) Germplasm. Genetic Resources and Crop Evolution, 52 (7). pp. 821-830. ISSN 0925-9864
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Basu, U and Narnoliya, L and Srivastava, R and Sharma, A and Bajaj, D and Daware, A and Thakro, V and Malik, N and Upadhyaya, H D and Tripathi, S and Hegde, V S and Tyagi, A K and Parida, S K (2019) CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics (TSI), 132 (7). pp. 2017-2038. ISSN 0040-5752
Narnoliya, L and Basu, U and Bajaj, D and Malik, N and Thakro, V and Daware, A and Sharma, A and Tripathi, S and Hegde, V S and Upadhyaya, H D and Singh, A K and Tyagi, A K and Parida, S K (2019) Transcriptional signatures modulating shoot apical meristem morphometric and plant architectural traits enhance yield and productivity in chickpea. The Plant Journal (TSI), 98 (5). pp. 864-883. ISSN 0960-7412
Basu, U and Bajaj, D and Sharma, A and Malik, N and Daware, A and Narnoliya, L and Thakro, V and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2018) Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant, Cell & Environment (TSI). pp. 1-16. ISSN 0140-7791
Shimray, P W and Bajaj, D and Srivastava, R and Daware, A and Upadhyaya, H D and Kumar, R and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter. pp. 1-13. ISSN 0735-9640
Upadhyaya, H D and Bajaj, D and Srivastava, R and Daware, A and Basu, U and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics. pp. 1-13. ISSN 1438-793X
Parida, S K and Kujur, A and Bajaj, D and Das, S and Srivastava, R. and Badoni, S and Laxmi, - and Thakro, V and Basu, U and Daware, A and Upadhyaya, H D and Tripathi, S and Bharadwaj, C (2017) Integrative genome-wide association studies (GWAS) to understand complex genetic architecture of quantitative traits in chickpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Bajaj, D and Upadhyaya, H D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes for dissecting complex branch number trait in chickpea. Plant Science, 245. pp. 61-70. ISSN 0168-9452
Upadhyaya, H D and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2015) A genome-scale integrated approach aids in genetic dissection of complex flowering time trait in chickpea. Plant Molecular Biology. 01-18. ISSN 0167-4412
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. Frontiers in Plant Science, 06 (162). 01-19. ISSN 1664-462X
Bajaj, D and Upadhyaya, H D and Khan, Y and Das, S and Badoni, S and Shree, T and Kumar, V and Tripathi, S and Gowda, C L L and Singh, S and Sharma, S and Tyagi, A K and Chattopdhyay, D and Parida, S K (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea. Scientific Reports, 5 (9264). pp. 1-14. ISSN 2045-2322
Bajaj, D and Saxena, M S and Kujur, A and Das, S and Badoni, S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea. Journal of Experimental Botany, 66 (5). pp. 1271-1290. ISSN 0022-0957
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea. Nature Scientific Reports, 5 (11166). pp. 1-20. ISSN 2045-2322
Kujur, A and Upadhyaya, H D and Shree, T and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2014) Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea. Scientific Reports, 5 (9468). pp. 1-13. ISSN 2045-2322
Basu, U and Upadhyaya, H D and Srivastava, R and Daware, A and Malik, N and Sharma, A and Bajaj, D and Narnoliya, L and Thakro, V and Kujur, A and Tripathi, S and Bharadwaj, C and Hegde, V S and Pandey, A K and Singh, A K and Tyagi, A K and Parida, S K (2019) ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea. Plant Physiology (TSI), 180 (1). pp. 253-275. ISSN 0032-0889
Bajaj, D and Srivastava, R and Nath, M and Tripathi, S and Bharadwaj, C and Upadhyaya, H D and Tyagi, A K and Parida, S K (2016) EcoTILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea. Frontiers in Plant Science, 07 (450). 01-09. ISSN 1664-462X
Bajaj, D and Das, S and Upadhyaya, H D and Ranjan, R and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea. Frontiers in Plant Science, 6 (979). 01-18. ISSN 1664-462X
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Saha, D and Rana, R S and Arya, L and Verma, M and Gowda, M V C and Upadhyaya, H D (2017) Genetic polymorphisms among and between blast disease resistant and susceptible finger millet, Eleusine coracana (L.) Gaertn. Plant Genetic Resources, 15 (04). pp. 355-365. ISSN 1479-2621
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Upadhyaya, H D and Valls, J F M and Bertolli, D and et al, . (2006) Molecular characterization of groundnut (Arachis hypogaea L.) composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Upadhyaya, H D and Bhattacharjee, R and Bertioli, D and et al, . (2005) Genotyping Groundnut (Arachis hypogaea) Composite Collection Using SSR Markers. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Saxena, R K and von Wettberg, E and Upadhyaya, H D and Sanchez, V and Songok, S and Saxena, K B and Kimurto, P.K. and Varshney, R K (2014) Genetic Diversity and Demographic History of Cajanus spp. Illustrated from Genome-Wide SNPs. PLoS ONE, 9 (2). pp. 1-9. ISSN 1932-6203
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Nigam, S N and Upadhyaya, H D and Chandra, S and Rao, R C N and Wright, G C and Reddy, A G S (2001) Gene effects for specific leaf area and harvest index in three crosses of groundnut (Arachis hypogaea). Annals of Applied Biology, 139 (3). pp. 301-306. ISSN 1744-7348
Roorkiwal, M and von Wettberg, E J and Upadhyaya, H D and Warschefsky, E and Rathore, A and Varshney, R K (2014) Exploring Germplasm Diversity to Understand the Domestication Process in Cicer spp. Using SNP and DArT Markers. PLoS ONE, 9 (7). pp. 1-10. ISSN 1932-6203
Saxena, R K and von Wettberg, E and Upadhyaya, H D and Sanchez, V and Songok, S and Saxena, K B and Kimurto, P.K. and Varshney, R K (2014) Genetic Diversity and Demographic History of Cajanus spp. Illustrated from Genome-Wide SNPs. PLoS ONE, 9 (2). pp. 1-9. ISSN 1932-6203
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Upadhyaya, H D and Singh, B B and Chauhan, K P S (1987) Induced polygenic variability in soybean. Journal of Nuclear Agriculture and Biology, 16 (3). pp. 120-126. ISSN 0379-5489
Upadhyaya, H D and Singh, B B (1979) Induced Variability in Soybean. Indian Journal of Genetics and Plant Breeding , 39 (2). pp. 207-209. ISSN 0975-6906
Upadhyaya, H D and Singh, B B and Chauhan, K P S (1984) Induced sterile mutants in soybeans. Current Science, 53 (8). pp. 433-435. ISSN 0011-3891
Nirgude, M and Kalyana Babu, B and Shambhavi, Y and Singh, U M and Upadhyaya, H D and Anil Kumar, . (2014) Development and molecular characterization of genic molecular markers for grain protein and calcium content in finger millet (Eleusine coracana (L.) Gaertn.). Molecular Biology Reports, 41 (3). pp. 1189-1200. ISSN 1573-4978
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2010) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 121 (05). pp. 971-984. ISSN 1432-2242
Narnoliya, L and Basu, U and Bajaj, D and Malik, N and Thakro, V and Daware, A and Sharma, A and Tripathi, S and Hegde, V S and Upadhyaya, H D and Singh, A K and Tyagi, A K and Parida, S K (2019) Transcriptional signatures modulating shoot apical meristem morphometric and plant architectural traits enhance yield and productivity in chickpea. The Plant Journal (TSI), 98 (5). pp. 864-883. ISSN 0960-7412
Basu, U and Upadhyaya, H D and Srivastava, R and Daware, A and Malik, N and Sharma, A and Bajaj, D and Narnoliya, L and Thakro, V and Kujur, A and Tripathi, S and Bharadwaj, C and Hegde, V S and Pandey, A K and Singh, A K and Tyagi, A K and Parida, S K (2019) ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea. Plant Physiology (TSI), 180 (1). pp. 253-275. ISSN 0032-0889
Upadhyaya, H D and Singh, M (2015) Genetic and Genomic Resources for Grain Cereals Improvement. Academic Press, Elsevier, USA. ISBN 978-0-12-802000-5
Sinha, P and Singh, V K and Saxena, R K and Khan, A W and Abbai, R and Chitikineni, A and Desai, A and Molla, J and Upadhyaya, H D and Kumar, A and Varshney, R K (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.). Plant Biotechnology Journal (TSI). pp. 1-9. ISSN 1467-7644
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Bajaj, D and Srivastava, R and Nath, M and Tripathi, S and Bharadwaj, C and Upadhyaya, H D and Tyagi, A K and Parida, S K (2016) EcoTILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea. Frontiers in Plant Science, 07 (450). 01-09. ISSN 1664-462X
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Roorkiwal, M and Nayak, S N and Thudi, M and Upadhyaya, H D and Brunel, D and Mournet, P and This, D and Sharma, P C and Varshney, R K (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers. Frontiers in Plant Science, 5 (248). pp. 1-11. ISSN 1664-462X
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Kumar, S and Malik, J and Thakur, P and Kaistha, S and Sharma, K D and Upadhyaya, H D (2011) Growth and metabolic responses of contrasting chickpea (Cicer arietinum L.) genotypes to chilling stress at reproductive phase. Acta Physiologiae Plantarum, 33 (3). pp. 779-787.
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Purushothaman, R and Thudi, M and Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Gowda, C L L and Varshney, R K (2015) Association of mid-reproductive stage canopy temperature depression with the molecular markers and grain yields of chickpea (Cicer arietinum L.) germplasm under terminal drought. Field Crops Research, 174. pp. 1-11. ISSN 0378-4290
Krishnamurthy, L and Upadhyaya, H D and Purushothaman, R and Gowda, C L L and Kashiwagi, J and Dwivedi, S L and Singh, Sube and Vadez, V (2014) The extent of variation in salinity tolerance of the minicore collection of finger millet (Eleusine coracana L. Gaertn.) germplasm. Plant Science, 227. pp. 51-59. ISSN 0168-9452
Krishnamurthy, L and Kashiwagi, J and Gaur, P M and Upadhyaya, H D and Vadez, V (2010) Sources of tolerance to terminal drought in the chickpea (Cicer arietinum L.) minicore germplasm. Field Crops Research, 119. pp. 322-330.
Kashiwagi, J and Krishnamurthy, L and Gaur, P M and Upadhyaya, H D and Varshney, R K and Tobita, S (2013) Traits of relevance to improve yield under terminal drought stress in chickpea (C. arietinum L.). Field Crops Research, 145 (1). pp. 88-95. ISSN 0378-4290
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Krishnamurthy, L and Kashiwagi, J and Tobita, S and Ito, O and Upadhyaya, H D and Gowda, C L L and Gaur, P M and Sheshshayee, M S and Singh, Sube and Vadez, V and Varshney, R K (2013) Variation in carbon isotope discrimination and its relationship with harvest index in the reference collection of chickpea germplasm. Functional Plant Biology, 14 (12). pp. 1350-1361. ISSN 1445-4408
Upadhyaya, H D and Kashiwagi, J and Varshney, R K and Gaur, P M and Saxena, K B and Krishnamurthy, L and Gowda, C L L and Pundir, R P S and et al, . (2012) Phenotyping chickpeas and pigeonpeas for adaptation to drought. Frontiers in Plant Physiology, 3 (179). pp. 1-10.
Kashiwagi, J and Upadhyaya, H D and Krishnamurthy, L (2010) Significance and genetic diversity of SPAD chlorophyll meter reading in chickpea germplasm in the semi-arid environments. Journal of Food Legumes, 23 (2). pp. 99-105. ISSN 0970-6380
Vetriventhan, M and Upadhyaya, H D and Deshpande, S P and Johnson, M S and Wallace, J G and Victor, A and Naresh, D and Rayaprolu, L and Singh, K and Mayes, S (2024) Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.). Scientific Reports (TSI), 14. pp. 1-17. ISSN 2045-2322
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Tyagi, A K and Jain, M and Parida, S K (2014) An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genes for seed weight in chickpea. Molecular Breeding, 34 (1). pp. 241-265. ISSN 1572-9788
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Jain, M and Tyagi, A K and Parida, S K (2013) Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping. DNA Research, 20 (4). pp. 355-374. ISSN 1756-1663
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Imtiaz, M and kharkwal, M C and Upadhyaya, H D (2010) Key access and utilization descriptors for chickpea genetic resources. Web Article. pp. 1-6.
Jarvis, A and Upadhyaya, H D and Gowda, C L L and Agrawal, P K and Fujisaka, S and Anderson, B (2008) Climate change and its effect on conservation and use of plant genetic resources for food and agriculture and associated biodiversity for food security. Monograph. Food and Agriculture Organization of the United Nations , UK.
Gadag, R N and Upadhyaya, H D and Gaud, G V (1999) Genetic analysis of yield, protein, oil and other related traits in soybean. Indian Journal of Genetics and Plant Breeding, 59 (4). pp. 487-492. ISSN 0019-5200
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Yadav, O P and Upadhyaya, H D and Reddy, K N and Jukanti, A K and Pandey, S and Tyagi, R K (2017) Genetic Resources of Pearl Millet: Status and Utilization. Indian Journal of Plant Genetic Resources, 30 (1). pp. 31-47. ISSN 0976-1926
Kalyana Babu, B and Sood, S and Kumar, D and Joshi, A and Pattanayak, A and Kant, L and Upadhyaya, H D (2018) Cross-genera transferability of rice and finger millet genomic SSRs to barnyard millet (Echinochloa spp.). 3 Biotech (TSI), 8 (2). pp. 1-10. ISSN 2190-572X
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Kalyana Babu, B and Sood, S and Kumar, D and Joshi, A and Pattanayak, A and Kant, L and Upadhyaya, H D (2018) Cross-genera transferability of rice and finger millet genomic SSRs to barnyard millet (Echinochloa spp.). 3 Biotech (TSI), 8 (2). pp. 1-10. ISSN 2190-572X
Yadav, O P and Upadhyaya, H D and Reddy, K N and Jukanti, A K and Pandey, S and Tyagi, R K (2017) Genetic Resources of Pearl Millet: Status and Utilization. Indian Journal of Plant Genetic Resources, 30 (1). pp. 31-47. ISSN 0976-1926
Kalyana Babu, B and Sood, S and Kumar, D and Joshi, A and Pattanayak, A and Kant, L and Upadhyaya, H D (2018) Cross-genera transferability of rice and finger millet genomic SSRs to barnyard millet (Echinochloa spp.). 3 Biotech (TSI), 8 (2). pp. 1-10. ISSN 2190-572X
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Imtiaz, M and kharkwal, M C and Upadhyaya, H D (2010) Key access and utilization descriptors for chickpea genetic resources. Web Article. pp. 1-6.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Dwivedi, S L and Baum, M and Varshney, R K and Udupa, S M and Gowda, C L L and Hoisington, D A and Singh, Sube (2008) Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.). BMC Plant Biology, 8 (106). pp. 1-12.
This, D and Courtois, B and Philippe, R and et al, . (2008) Some Data On Allele Diversity At Orthologous Candidate Genes In GCP Crops. In: Plant & Animal Genomes XVIII Conference, 9-13 January 2010, San Diego, CA.
Redden, R J and Furman, B J and Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Coyne, C J and Enneking, D (2007) Biodiversity Management in Chickpea. In: Chickpea Breeding and Management. CAB International Publishing, Wallingford Oxfordshire, UK, pp. 355-358. ISBN 978-1-84593-213-8
Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.
Upadhyaya, H D and Furman, B J and Dwivedi, S L and Upuda, S M and Gowda, C L L and Baum, M and Crouch, J H and Buhariwalla, H K and Singh, Sube (2006) Development of a composite collection for mining germplasm possessing allelic variation for beneficial traits in chickpea. Plant Genetic Resources, 4 (1). pp. 13-19. ISSN 1479-2621
Hoisington, D A and Upadhyaya, H D and Dwivedi, S L and Baum, M and Udupa, S M and Furman, B J and Chandra, S and Eshwar, K and Gowda, C L L and Singh, S and Prasanth, V P (2006) Genotypic and Phenotypic Variation in the Global Collection of Chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Upadhyaya, H D and Baum, M and Buhariwala, H K and Udupa, S M and Furman, B J and Dwivedi, S L and Hoisington, D A and Gaur, P M and Chandra, S and Gowda, C L L and Valkoun, J (2006) Mining the chickpea composite collection for allelic variation. In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Upadhyaya, H D and Baum, M and Dwivedi, S L and et al, . (2005) Mining allelic variation associated with beneficial traits in composite collection of chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Upadhyaya, H D and Nigam, S N and Rao, M J V (1992) Breeding early-maturing groundnuts at ICRISAT. In: Groundnut- A global Perspective: Proceeding of an International Workshop., 25-29 Nov 1991, ICRISAT Asia Centre, Patancheru, Andhra Pradesh.
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Waliyar, F and Kumar, K V K and Diallo, M and Traore, A and Mangala, U N and Upadhyaya, H D and Sudini, H (2016) Resistance to pre-harvest aflatoxin contamination in ICRISAT’s groundnut mini core collection. European Journal of Plant Pathology, 145 (4). pp. 901-913. ISSN 1573-8469
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Gumma, M K and Irshad Ahmed, M and Manyasa, E O and Thimma Reddy, M and Singh, S K (2017) Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Australian Journal of Crop Science, 11 (4). pp. 424-437. ISSN 1835-2707
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Ganga Rao, N V P R and Manyasa, E O and Henry, O and Siambi, M and Upadhyaya, H D (2016) Effective Utilization of Local Genetic Diversity of Pigeonpea, Sorghum and Finger Millet in Eastern and Southern Africa: Impacts and Prospects. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Hamidou, F and Heynikoye, M and Halilou, O and Upadhyaya, H D and Vadez, V (2017) Drought (WS) and low phosphorus (LP) stress in groundnut: Water extraction pattern and tolerance related traits for breeding program. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Falalou, H and Sani, M A and Hassane, Y B and Falke, B A and Upadhyaya, H D (2017) Abiotic Stresses Tolerance and Nutrients Contents in Groundnut, Pearl Millet and Sorghum Mini Core Germplasm for Food and Nutrition Security. Indian Journal of Plant Genetic Resources, 30 (3). pp. 201-209. ISSN 0971-8184
Hamidou, F and Bissala, H Y and Awel, M S and Upadhyaya, H D (2016) Abiotic Stresses Tolerance and Nutrients Contents in Groundnut, Pearl Millet and Sorghum Mini Core Collections for Food and Nutrition Security. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Waliyar, F and Kumar, K V K and Diallo, M and Traore, A and Mangala, U N and Upadhyaya, H D and Sudini, H (2016) Resistance to pre-harvest aflatoxin contamination in ICRISAT’s groundnut mini core collection. European Journal of Plant Pathology, 145 (4). pp. 901-913. ISSN 1573-8469
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Wallace, J G and Upadhyaya, H D and Vetriventhan, M and Buckler, E S and Hash, C T and Ramu, P (2015) The Genetic Makeup of a Global Barnyard Millet Germplasm Collection. Plant Genome, 08 (01). 01-07. ISSN 1940-3372
Subba Rao, G V and Nakahara, K and Ando, Y and Sahrawat, K L and Deshpande, S P and Srinivasa Rao, P and Upadhyaya, H D and Hash, C T (2015) Biological nitrification inhibition (BNI) activity in sorghum: Potential role for enhancing nitrogen-use efficiency (NUE). In: Millets : Promotion for Food, Feed, Fodder, Nutritional and Environment Security, Proceedings of Global Consultation on Millets Promotion for Health & Nutritional Security. Society for Millets Research, ICAR Indian Institute of Millets Research, Hyderabad, pp. 91-96. ISBN 8189335529
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Gowda, C L L and Haussmann, B I G (2010) Identification of geographical gaps in the pearl millet germplasm conserved at ICRISAT genebank from West and Central Africa. Plant Genetic Resources (TSI), 8 (1). pp. 45-51. ISSN 1479-2621
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Sinha, P and Singh, V K and Saxena, R K and Khan, A W and Abbai, R and Chitikineni, A and Desai, A and Molla, J and Upadhyaya, H D and Kumar, A and Varshney, R K (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.). Plant Biotechnology Journal (TSI). pp. 1-9. ISSN 1467-7644
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Johnson, M and Deshpande, S P and Vetriventhan, M and Upadhyaya, H D and Wallace, J G (2019) Genome-Wide Population Structure Analyses of Three Minor Millets: Kodo Millet, Little Millet, and Proso Millet. The Plant Genome (TSI), 12 (3). pp. 1-9. ISSN 1940-3372
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Basu, U and Narnoliya, L and Srivastava, R and Sharma, A and Bajaj, D and Daware, A and Thakro, V and Malik, N and Upadhyaya, H D and Tripathi, S and Hegde, V S and Tyagi, A K and Parida, S K (2019) CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics (TSI), 132 (7). pp. 2017-2038. ISSN 0040-5752
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Basu, U and Upadhyaya, H D and Srivastava, R and Daware, A and Malik, N and Sharma, A and Bajaj, D and Narnoliya, L and Thakro, V and Kujur, A and Tripathi, S and Bharadwaj, C and Hegde, V S and Pandey, A K and Singh, A K and Tyagi, A K and Parida, S K (2019) ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea. Plant Physiology (TSI), 180 (1). pp. 253-275. ISSN 0032-0889
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Vetriventhan, M and Upadhyaya, H D (2019) Variability for Productivity and Nutritional Traits in Germplasm of Kodo Millet, an Underutilized Nutrient-Rich Climate Smart Crop. Crop Science (TSI), 59 (3). pp. 1095-1106. ISSN 0011-183X
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Naresh, D (2019) Variability in the Global Proso Millet (Panicum miliaceum L.) Germplasm Collection Conserved at the ICRISAT Genebank. Agriculture, 9 (5) (112). pp. 1-16. ISSN 2077-0472
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Azevedo, V C R and Vetriventhan, M and Ramachandran, S and Reddy, V G and Singh, P and Kumar, V and Babu, R and Naresh, D and Pawar, G and Mala, S R and Upadhyaya, H D (2019) Wide variability in the ICRISAT germplasm collections as a source for genetic enhancement of crop cultivars. In: First International Experts Workshop on Prebreeding utilizing Crop Wild Relatives, April 24-26, 2019, Rabat, Morocco.
Sastry, D V S S R and Upadhyaya, H D and Srinivas, T R (2019) Variation for seed physical and hydration properties of chickpea (Cicer arietinum L.) mini core collection and their relevance to conservation and utilization. Plant Genetic Resources: Characterization and Utilization (TSI). pp. 1-14. ISSN 1479-2621
Narnoliya, L and Basu, U and Bajaj, D and Malik, N and Thakro, V and Daware, A and Sharma, A and Tripathi, S and Hegde, V S and Upadhyaya, H D and Singh, A K and Tyagi, A K and Parida, S K (2019) Transcriptional signatures modulating shoot apical meristem morphometric and plant architectural traits enhance yield and productivity in chickpea. The Plant Journal (TSI), 98 (5). pp. 864-883. ISSN 0960-7412
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Sharma, S and Upadhyaya, H D (2019) Photoperiod Response of Annual Wild Species and Cultivated Chickpea on Phenology, Growth, and Yield Traits. Crop Science (TSI). pp. 1-8. ISSN 0011-183X
Sharma, S and Upadhyaya, H D (2019) Photoperiod Response of Annual Wild Species and Cultivated Chickpea on Phenology, Growth, and Yield Traits. Crop Science (TSI), 59. pp. 1-8. ISSN 0011-183X
Toker, C and Adak, A and Sari, D and Sari, H and Ceylan, F O and Canci, H and Ikten, C and Erler, F and Upadhyaya, H D (2019) Registration of AWC 612M Chickpea Mutant Germplasm Line Resistant to Leaf Miner (Liriomyza cicerina). Journal of Plant Registrations (TSI), 13 (1). pp. 87-90. ISSN 1936-5209
Vetriventhan, M and Upadhyaya, H D (2018) Diversity and trait-specific sources for productivity and nutritional traits in the global proso millet (Panicum miliaceum L.) germplasm collection. The Crop Journal (TSI), 6 (5). pp. 451-463. ISSN 22145141
Basu, U and Srivastava, R and Bajaj, D and Thakro, V and Daware, A and Malik, N and Upadhyaya, H D and Parida, S K (2018) Genome-wide generation and genotyping of informative SNPs to scan molecular signatures for seed yield in chickpea. Scientific Reports (TSI), 8 (13240). pp. 1-11. ISSN 2045-2322
Bhagyawant, S S and Gautam, A K and Narvekar, D T and Gupta, N and Bhadkaria, A and Srivastava, N and Upadhyaya, H D (2018) Biochemical diversity evaluation in chickpea accessions employing mini-core collection. Physiology and Molecular Biology of Plants (TSI). pp. 1-19. ISSN 0971-5894
Upadhyaya, H D and Vetriventhan, M (2018) Ensuring the genetic diversity of sorghum. In: Achieving sustainable cultivation of sorghum, Volume 1 : Genetics, breeding and production techniques. Burleigh Dodds Science Publishing Limited, Cambridge. ISBN 9781786761200
Basu, U and Bajaj, D and Sharma, A and Malik, N and Daware, A and Narnoliya, L and Thakro, V and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2018) Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant, Cell & Environment (TSI). pp. 1-16. ISSN 0140-7791
Opole, R A and Prasad, P V V and Djanaguiraman, M and Vimala, K and Kirkham, M B and Upadhyaya, H D (2018) Thresholds, sensitive stages and genetic variability of finger millet to high temperature stress. Journal of Agronomy and Crop Science (TSI), 204 (5). pp. 477-492. ISSN 09312250
Eker, T and Erler, F and Adak, A and Imrek, B and Guven, H and Tosun, H S and Sari, D and Sari, H and Upadhyaya, H D and Toker, C and Ikten, C (2018) Screening of chickpea accessions for resistance against the pulse beetle, Callosobruchus chinensis L. (Coleoptera: Bruchidae). Journal of Stored Products Research (TSI), 76. pp. 51-57. ISSN 0022474X
Kalyana Babu, B and Sood, S and Kumar, D and Joshi, A and Pattanayak, A and Kant, L and Upadhyaya, H D (2018) Cross-genera transferability of rice and finger millet genomic SSRs to barnyard millet (Echinochloa spp.). 3 Biotech (TSI), 8 (2). pp. 1-10. ISSN 2190-572X
Khedikar, Y and Pandey, M K and Sujay, V and Singh, S and Nayak, S N and Klein-Gebbinck, H W and Sarvamangala, C and Mukri, G and Garg, V and Upadhyaya, H D and Nadaf, H L and Gowda, M V C and Varshney, R K and Bhat, R S (2018) Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.). Molecular Breeding (TSI), 38(1) (7). pp. 1-12. ISSN 1380-3743
Gaur, P M and Varshney, R K and Upadhyaya, H D and Vadez, V and Sharma, K K and Bhatnagar-Mathur, P and Sameer Kumar, C V and Janila, P and Srinivasan, S and Sajja, S and Sharma, S and Thudi, M and Roorkiwal, M and Saxena, R K and Pandey, M K and Ranga Rao, G V and Sharma, M and Sudini, H and Gopalakrishnan, S and Ganga Rao, N V P R and Fikre, A and Ojiewo, C O and Shewayrga, H and Motagi, B N and Okori, P (2018) Advances in Food Legumes Research at ICRISAT. Ethiopian Journal of Crop Science, 6 (3). pp. 1-47. ISSN 2072-8506
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Ahmed, M I and Reddy, M T (2018) Latitudinal Adaptation of Flowering Response to Photoperiod and Temperature in the World Collection of Sorghum Landraces. Crop Science (TSI). ISSN 0011-183X
Upadhyaya, H D and Vetriventhan, M (2018) Underutilized Climate-Smart Nutrient Rich Small Millets for Food and Nutritional Security. In: Regional Expert Consultation on Underutilized Crops for Food and Nutritional Security in Asia and the Pacific – Thematic, Strategic Papers and Country Status Reports. Asia-Pacific Association of Agricultural Research Institutions (APAARI), Bangkok, Thailand, pp. 109-120. ISBN 978-616-7101-10-1
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Irshad Ahmed, M and Gumma, M K and Thimma Reddy, M and Singh, S K (2017) Sorghum germplasm from West and Central Africa maintained in the ICRISAT genebank: Status, gaps, and diversity. The Crop Journal, 5 (6). pp. 518-532. ISSN 22145141
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Ramachandran, S and Kumar, V and Singh, S (2017) Characterization and genetic potential of African pearl millet named landraces conserved at the ICRISAT genebank. Plant Genetic Resources, 15 (5). pp. 438-452. ISSN 1479-2621
Dwivedi, S L and Lammerts van Bueren, E T and Ceccarelli, S and Grando, S and Upadhyaya, H D and Ortiz, R (2017) Diversifying Food Systems in the Pursuit of Sustainable Food Production and Healthy Diets. Trends in Plant Science, 22 (10). pp. 842-856. ISSN 13601385
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Ortiz, R and Upadhyaya, H D (2017) Genetic Resources: From Mendel’s peas to underutilized legume species. Legume Perspectives, 14. pp. 15-17.
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Yol, E and Furat, S and Upadhyaya, H D and Uzun, B (2017) Characterization of groundnut (Arachis hypogaea L.) collection using quantitative and qualitative traits in the Mediterranean Basin. Journal of Integrative Agriculture, 16. pp. 1-12. ISSN 2095-3119
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Saha, D and Rana, R S and Arya, L and Verma, M and Gowda, M V C and Upadhyaya, H D (2017) Genetic polymorphisms among and between blast disease resistant and susceptible finger millet, Eleusine coracana (L.) Gaertn. Plant Genetic Resources, 15 (04). pp. 355-365. ISSN 1479-2621
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Kumar, V and Gumma, M K and Ramachandran, S (2017) Geographical distribution of traits and diversity in the world collection of pearl millet [Pennisetum glaucum (L.) R. Br., synonym: Cenchrus americanus (L.) Morrone] landraces conserved at the ICRISAT genebank. Genetic Resources and Crop Evolution, 64 (6). pp. 1365-1381. ISSN 0925-9864
Shimray, P W and Bajaj, D and Srivastava, R and Daware, A and Upadhyaya, H D and Kumar, R and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter. pp. 1-13. ISSN 0735-9640
Upadhyaya, H D and Reddy, K N and Pattanashetti, S K and Kumar, V and Ramachandran, S (2017) Identification of promising sources for fodder traits in the world collection of pearl millet at the ICRISAT genebank. Plant Genetic Resources (TSI). pp. 1-10. ISSN 1479-2621
Upadhyaya, H D and Bajaj, D and Srivastava, R and Daware, A and Basu, U and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics. pp. 1-13. ISSN 1438-793X
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Gumma, M K and Irshad Ahmed, M and Manyasa, E O and Thimma Reddy, M and Singh, S K (2017) Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Australian Journal of Crop Science, 11 (4). pp. 424-437. ISSN 1835-2707
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.). Field Crops Research, 201. pp. 146-161. ISSN 03784290
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Hamidou, F and Heynikoye, M and Halilou, O and Upadhyaya, H D and Vadez, V (2017) Drought (WS) and low phosphorus (LP) stress in groundnut: Water extraction pattern and tolerance related traits for breeding program. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Sinha, P and Saxena, R K and Singh, V K and Khan, A W and Upadhyaya, H D and Desai, A and Sameer Kumar, C V and Varshney, R K (2017) Haplotype for drought responsive genes in pigeonpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Parida, S K and Kujur, A and Bajaj, D and Das, S and Srivastava, R. and Badoni, S and Laxmi, - and Thakro, V and Basu, U and Daware, A and Upadhyaya, H D and Tripathi, S and Bharadwaj, C (2017) Integrative genome-wide association studies (GWAS) to understand complex genetic architecture of quantitative traits in chickpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Liao, B and Lei, Y and Jiang, H and Yan, L and Wan, L and Huang, L and Zhou, X and Luo, H and Chen, Y and Wang, H and Pandey, M K and Sudini, H and Upadhyaya, H D and Varshney, R K (2017) Management of aflatoxin contamination in groundnut by enhancing host-plant resistance. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Falalou, H and Sani, M A and Hassane, Y B and Falke, B A and Upadhyaya, H D (2017) Abiotic Stresses Tolerance and Nutrients Contents in Groundnut, Pearl Millet and Sorghum Mini Core Germplasm for Food and Nutrition Security. Indian Journal of Plant Genetic Resources, 30 (3). pp. 201-209. ISSN 0971-8184
Gopalakrishnan, S and Singh, M and Swarnalakshmi, K and Srinivas, V and Rathore, A and Upadhyaya, H D and Basu, P S and Chaturvedi, S K (2017) Assessment of nodulation potential in mini-core genotypes and land races of chickpea. Journal of Food Legumes, 30 (2). pp. 65-72. ISSN 0970-6380
Yadav, O P and Upadhyaya, H D and Reddy, K N and Jukanti, A K and Pandey, S and Tyagi, R K (2017) Genetic Resources of Pearl Millet: Status and Utilization. Indian Journal of Plant Genetic Resources, 30 (1). pp. 31-47. ISSN 0976-1926
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea. Functional Plant Biology, 44. pp. 235-252. ISSN 1445-4408
Sharma, S and Pandey, M K and Sudini, H and Upadhyaya, H D and Varshney, R K (2017) Harnessing Genetic Diversity of Wild Arachis Species for Genetic Enhancement of Cultivated Peanut. Crop Science, 57 (3). pp. 1121-1131. ISSN 0011-183X
Upadhyaya, H D and Dwivedi, S L and Sharma, S (2017) Managing and Discovering Agronomically Beneficial Traits in Chickpea Germplasm Collections. In: The Chickpea Genome. Compendium of Plant Genomes book series (CPG) . Springer, pp. 43-52. ISBN 978-3-319-66115-5
Hamidou, F and Bissala, H Y and Awel, M S and Upadhyaya, H D (2016) Abiotic Stresses Tolerance and Nutrients Contents in Groundnut, Pearl Millet and Sorghum Mini Core Collections for Food and Nutrition Security. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Ganga Rao, N V P R and Manyasa, E O and Henry, O and Siambi, M and Upadhyaya, H D (2016) Effective Utilization of Local Genetic Diversity of Pigeonpea, Sorghum and Finger Millet in Eastern and Southern Africa: Impacts and Prospects. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Pattanashetti, S K and Upadhyaya, H D and Kumar, V and Narsimha Reddy, K (2016) Genetic Variability for Nutritional Traits among Wild Relatives of Pearl Millet Conserved at ICRISAT Genebank. In: 1st International Agrobiodiversity Congress, November 06 - 09, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Sastry, D V S S R and Upadhyaya, H D and Rameshbabu, V (2016) Improved Facilities and Methodologies for Regenerating Unadapted and Wild Groundnut Germplasm at ICRISAT Genebank. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Vetriventhan, M and Upadhyaya, H D (2016) Little Millet, Panicum sumatrense, An Under-utilized Multipurpose Crop. In: 1st International Agrobiodiversity Congress, New Delhi, India, November 06-09, 2016.
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2016) Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.). Field Crops Research, 197 (-). pp. 10-27. ISSN 03784290
Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Purushothaman, R and Dwivedi, S L and Vadez, V (2016) Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm. Crop and Pasture Science, 67 (8). pp. 834-846. ISSN 1836-0947
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Gumma, M K and Ahmed, M I and Thimma Reddy, M and Singh, S K (2016) Status, genetic diversity and gaps in sorghum germplasm from South Asia conserved at ICRISAT genebank. Plant Genetic Resources. pp. 1-12. ISSN 1479-2621
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Kujur, A and Upadhyaya, H D and Bajaj, D and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea. Scientific Reports, 6 (27968). 01-09. ISSN 2045-2322
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Yol, E and Upadhyaya, H D and Uzun, B (2016) Identification of rust resistance in groundnut using a validated SSR marker. Euphytica, 210. pp. 405-410. ISSN 0014-2336
Bajaj, D and Srivastava, R and Nath, M and Tripathi, S and Bharadwaj, C and Upadhyaya, H D and Tyagi, A K and Parida, S K (2016) EcoTILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea. Frontiers in Plant Science, 07 (450). 01-09. ISSN 1664-462X
Upadhyaya, H D and Bajaj, D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genetic dissection of seed-iron and zinc concentrations in chickpea. Scientific Reports, 06 (24050). 01-12. ISSN 2045-2322
Upadhyaya, H D and Bajaj, D and Narnoliya, L and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea. Frontiers in Plant Science, 07 (302). 01-13. ISSN 1664-462X
Waliyar, F and Kumar, K V K and Diallo, M and Traore, A and Mangala, U N and Upadhyaya, H D and Sudini, H (2016) Resistance to pre-harvest aflatoxin contamination in ICRISAT’s groundnut mini core collection. European Journal of Plant Pathology, 145 (4). pp. 901-913. ISSN 1573-8469
Upadhyaya, H D and Reddy, K N and Sharma, S and Dwivedi, S L and Ramachandran, S (2016) Enhancing the value of genetic resources for use in pigeonpea improvement. Legume Perspectives (11). pp. 13-16. ISSN 2340-1559
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Dwivedi, S L and Ceccarelli, S and Blair, M W and Upadhyaya, H D and Ashok Kumar, A and Ortiz, R (2016) Landrace Germplasm for Improving Yield and Abiotic Stress Adaptation. Trends in Plant Science, 21 (01). pp. 31-42. ISSN 1360-1385
Sharma, S and Upadhyaya, H D (2016) Pre-breeding to expand primary genepool through introgression of genes from wild Cajanus species for pigeonpea improvement. Legume Perspectives (11). pp. 17-20. ISSN 2340-1559
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Ahmed, M I (2016) Adaptation Pattern and Genetic Potential of Indian Pearl Millet Named Landraces Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 29 (2). pp. 97-113. ISSN 0971-8184
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Vetriventhan, M and Upadhyaya, H D and Dwivedi, S L and Pattanashetti, S K and Singh, S S (2016) Finger and foxtail millets. In: Genetic and Genomic Resources for Grain Cereals Improvement. Academic Press, Elsevier, USA, pp. 291-319. ISBN 978-0-12-802000-5
Upadhyaya, H D and Dwivedi, S L and Singh, Sube and Sahrawat, K L and Singh, S (2016) Genetic Variation and Postflowering Drought Effects on Seed Iron and Zinc in ICRISAT Sorghum Mini Core Collection. Crop Science, 56 (1). pp. 1-11. ISSN 0011-183X
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Bajaj, D and Upadhyaya, H D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes for dissecting complex branch number trait in chickpea. Plant Science, 245. pp. 61-70. ISSN 0168-9452
Sharma, S and Upadhyaya, H D (2016) Interspecific hybridization to introduce useful genetic variability for pigeonpea improvement. Indian Journal of Genetics and Plant Breeding, 76 (4). pp. 496-503. ISSN 0975-6906
Pattanashetti, S K and Upadhyaya, H D and Dwivedi, S L and Vetriventhan, M and Narsimha Reddy, K (2016) Pearl millet. In: Genetic and Genomic Resources for Grain Cereals Improvement (eds. Singh, M. and Upadhyaya H.D.). Academic Press, Elsevier, USA, pp. 253-289. ISBN 978-0-12-802000-5
Upadhyaya, H D and Vetriventhan, M and Dwivedi, S L and Pattanashetti, S K and Singh, S K (2016) Proso, barnyard, little, and kodo millets. In: Genetic and Genomic Resources for Grain Cereals Improvement (eds. Singh, M. and Upadhyaya H.D.). Academic Press, Elsevier, USA, pp. 321-343. ISBN 978-0-12-802000-5
Wang, Y H and Upadhyaya, H D and Dweikat, I (2016) Sorghum. In: Genetic and Genomic Resources for Grain Cereals Improvement (eds. Singh, M. and Upadhyaya H.D.). Academic Press, Elsevier, USA, 227 -251. ISBN 978-0-12-802000-5
Upadhyaya, H D and Vetriventhan, M and Deshpande, S (2016) Sorghum Germplasm Resources Characterization and Trait Mapping. In: The Sorghum Genome. Compendium of Plant Genomes . Springer, pp. 77-94. ISBN 978-3-319-47787-9
Sood, S and Khulbe, R K and Arun Kumar, R and Agrawal, P K and Upadhyaya, H D (2015) Barnyard millet global core collection evaluation in the submontane Himalayan region of India using multivariate analysis. The Crop Journal, 3 (6). pp. 517-525. ISSN 2095-5421
Bajaj, D and Das, S and Upadhyaya, H D and Ranjan, R and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea. Frontiers in Plant Science, 6 (979). 01-18. ISSN 1664-462X
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Pattanashetti, S K and Upadhyaya, H D and Blummel, M and Reddy, K N and Ramanareddy, Y and Kumar, V and Singh, S (2015) Genetic variability in Napier grass (Pennisetum purpureum) germplasm conserved at ICRISAT genebank. In: XXIII International Grassland Congress IGC 2015, November 20 -24, 2015, New Delhi.
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Singh, S and Reddy, T M and Ahmed, M I (2015) Status and genetic diversity in pigeonpea germplasm from Caribbean and Central American regions at ICRISAT genebank. Plant Genetic Resources, 13 (03). 01-09. ISSN 1479-263X
Upadhyaya, H D and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2015) A genome-scale integrated approach aids in genetic dissection of complex flowering time trait in chickpea. Plant Molecular Biology. 01-18. ISSN 0167-4412
Pattanashetti, S K and Upadhyaya, H D and Motagi, B N and Kanatti, A and Boodi, I and Biradar, B D and Naidu, G K and Chimmad, V P (2015) Genetic Differences for Iron Absorption Efficiency Related Traits in Groundnut. In: 47th Annual Meeting of the American Peanut Research and Education Society (APRES), July 14-16, 2015, Francis Marion Hotel, Charleston, SC, USA.
Sharma, R and Upadhyaya, H D and Sharma, S and Gate, V L and Raj, C (2015) New Sources of Resistance to Multiple Pathotypes of Sclerospora graminicola in the Pearl Millet Mini Core Germplasm Collection. Crop Science, 55. ISSN 1435-0653
Sudini, H and Upadhyaya, H D and Reddy, S V and Naga Mangala, U and Rathore, A and Vijay Krishna Kumar, K (2015) Resistance to late leaf spot and rust diseases in ICRISAT’s mini core collection of peanut (Arachis hypogaea L.). Australasian Plant Pathology, 44 (5). pp. 557-566. ISSN 0815-3191
Divakara, B N and Upadhyaya, H D and Laxmi, A and Das, R (2015) Identification of diverse genotypes with high oil content in Madhuca latifolia for further use in tree improvement. Journal of Forestry Research, 26 (02). pp. 369-379. ISSN 1993-0607
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Yol, E and Upadhyaya, H D and Uzun, B (2015) Molecular diagnosis to identify new sources of resistance to sclerotinia blight in groundnut (Arachis hypogaea L.). Euphytica, 203 (2). pp. 367-374. ISSN 1573-5060
Das, S and Upadhyaya, H D and Bajaj, D and Kujur, A and Badoni, S and Laxmi, A and Kumar, V and Tripathi, S and Laxmipathi Gowda, C L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea. DNA Research, 22 (2). pp. 1-11. ISSN 1340-2838
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. Frontiers in Plant Science, 06 (162). 01-19. ISSN 1664-462X
Bajaj, D and Upadhyaya, H D and Khan, Y and Das, S and Badoni, S and Shree, T and Kumar, V and Tripathi, S and Gowda, C L L and Singh, S and Sharma, S and Tyagi, A K and Chattopdhyay, D and Parida, S K (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea. Scientific Reports, 5 (9264). pp. 1-14. ISSN 2045-2322
Wallace, J G and Upadhyaya, H D and Vetriventhan, M and Buckler, E S and Hash, C T and Ramu, P (2015) The Genetic Makeup of a Global Barnyard Millet Germplasm Collection. Plant Genome, 08 (01). 01-07. ISSN 1940-3372
Upadhyaya, H D (2015) Establishing core collections for enhanced use of germplasm in crop improvement. EKIN, Journal of Crop Breeding and Genetics, 1 (1). pp. 1-12.
Kashiwagi, J and Krishnamurthy, L and Purushothaman, R and Upadhyaya, H D and Gaur, P M and Gowda, C L L and Ito, O and Varshney, R K (2015) Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.). Field Crops Research, 170 (-). pp. 47-54. ISSN 1872-6852
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Lalitha, N and Upadhyaya, H D and Krishnamurthy, L and Kashiwagi, J and Kavi Kishor, P B and Singh, S (2015) Assessing Genetic Variability for Root Traits and Identification of Trait-Specific Germplasm in Chickpea Reference Set. Crop Science, 55 (-). 01-12. ISSN 1435-0653
Purushothaman, R and Thudi, M and Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Gowda, C L L and Varshney, R K (2015) Association of mid-reproductive stage canopy temperature depression with the molecular markers and grain yields of chickpea (Cicer arietinum L.) germplasm under terminal drought. Field Crops Research, 174. pp. 1-11. ISSN 0378-4290
Sood, S and Khulbe, R K and Gupta, A K and Agrawal, P K and Upadhyaya, H D and Bhatt, J C (2015) Barnyard millet – a potential food and feed crop of future. Plant Breeding, 134 (2). pp. 135-147. ISSN 0179-9541
Monyo, E and Mponda, O and Ganesamurthy, K and Upadhyaya, H D and Janila, P (2015) Bulletin of Tropical Legumes. Tropical Legumes III, 02. 01-06.
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Upadhyaya, H D and Singh, M (2015) Genetic and Genomic Resources for Grain Cereals Improvement. Academic Press, Elsevier, USA. ISBN 978-0-12-802000-5
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Das, S and Upadhyaya, H D and Srivastava, R and Bajaj, D and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea. DNA Research. 01-10. ISSN 1340-2838
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Gowda, C L L and Reddy, T M and Ramachandran, S (2015) Identification of Gaps in Pigeonpea Germplasm from East and Southern Africa Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 28 (2). pp. 180-188. ISSN 0971-8184
Babu, T K and Sharma, R and Thakur, R P and Upadhyaya, H D and Reddy, P N and Girish, A G (2015) Selection of Host Differentials for Elucidating Pathogenic Variation in Magnaporthe grisea Populations Adapted to Finger Millet (Eleusine coracana). Plant Disease, 99 (12). pp. 1784-1789. ISSN 0191-2917
Yol, E and Upadhyaya, H D and Uzun, B (2015) Validation of field resistance to late leaf spot by using a molecular marker in groundnut. In: International Plant Breeding Congress (IPBC) and Eucarpia – Oil And Protein Crops Section Conference, November 01 - 05, 2015, WOW Kremlin Palace Hotel, Antalya, Turkey.
Sharma, S and Upadhyaya, H D (2015) Vernalization and Photoperiod Response in Annual Wild Cicer Species and Cultivated Chickpea. Crop Science, 55. 01-08. ISSN 0011-183X
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea. Nature Scientific Reports, 5 (11166). pp. 1-20. ISSN 2045-2322
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Varshney, R K and Thudi, M and Upadhyaya, H D and Dwivedi, S and Udupa, S and Furman, B and Baum, M and Hoisington, D (2014) A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.). Plant Genetic Resources, 12 (S1). S118-S120. ISSN 1479-2621
Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic diversity analysis based on nutritional, oil quality and yield component traits in mini core collection of groundnut (Arachis hypogaea L.). Karnataka Journal of Agricultural Sciences, 27 (02). pp. 219-221. ISSN 0972-1061
Upadhyaya, H D and Sharma, S and Dwivedi, S L and Singh, S K (2014) Sorghum Genetic Resources: Conservation and Diversity Assessment for Enhanced Utilization in Sorghum Improvement. In: Genetics, Genomics and Breeding of Sorghum. Series on Genetics, Genomics and Breeding of Crop Plants . CRC Press (Taylor & Francis), Boca Raton, pp. 28-55. ISBN 9781482210088
Srinivasa Rao, P and Reddy, B V S and Nagaraj, N and Upadhyaya, H D (2014) Sorghum Production for Diversified Uses. In: Genetics, Genomics and Breeding of Sorghum. Series on Genetics, Genomics and Breeding of Crop Plants . CRC Press (Taylor & Francis), Boca Raton, 01-27. ISBN 9781482210088
Venkateswaran, K and Muraya, M and Dwivedi, S L and Upadhyaya, H D (2014) Wild Sorghums—Their Potential Use in Crop Improvement. In: Genetics, Genomics and Breeding of Sorghum. Series on Genetics, Genomics and Breeding of Crop Plants . CRC Press (Taylor & Francis), Boca Raton, pp. 56-89. ISBN 9781482210088
Mula, M G and Saxena, K B and Gaur, P M and Upadhyaya, H D (2013) Legumes Seed System in Asia: A Case in India. In: FAO & ICRISAT 2015. Community Seed Production, by Ojiewo CO, Kugbei S, Bishaw Z & Rubyogo JC (Eds). Workshop Proceedings, 9 - 11 December 2013, Jupiter International Hotel, Addis Ababa, Ethiopia.
Bharathi, A and Veerabathiran, P and Gowda, C L L and Upadhyaya, H D (2013) Genetic Diversity of Global Finger Millet Composite Collection Based on Qualitative Traits and Biological Races. Madras Agricultural Journal, 100 (4-6). pp. 277-279. ISSN 0024-9602
Bharathi, A and Veerabadhiran, P and Gowda, C L L and Upadhyaya, H D (2013) Genetic Variability and Correlation Analysis in Global Composite Collection of Finger Millet (Eleusine coracana (L.) Gaertn). Madras Agricultural Journal, 100 (4-6). pp. 280-282. ISSN 0024-9602
Singh, M and Upadhyaya, H D and Bisht, I S (2013) Genetic and Genomic Resources of Grain Legume Improvement. Elsevier Inc. ISBN 978-0-12-397935-3
Sharma, R and Manjunatha, S M and Rao, V P and Upadhyaya, H D and Thakur, R P (2011) Pathogenic variation in Pyricularia grisea, the causal agent of pearl millet blast and resistance in mini core collection to the pathogen. Phytopathology, 101 (6). S164. ISSN 0031-949X
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2010) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 121 (05). pp. 971-984. ISSN 1432-2242
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Gowda, C L L and Haussmann, B I G (2010) Identification of geographical gaps in the pearl millet germplasm conserved at ICRISAT genebank from West and Central Africa. Plant Genetic Resources (TSI), 8 (1). pp. 45-51. ISSN 1479-2621
Upadhyaya, H D and Smithson, J B and Haware, M P and Kumar, J (1983) Resistance to wilt in chickpea. II. Further evidence for two genes for resistance to race 1. Euphytica, 32 (03). pp. 749-755. ISSN 0014-2336
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Nigam, S N and Waliyar, F and Aruna, R and Reddy, S V and Kumar, P L and Craufurd, P Q and Diallo, A T and Ntare, B R and Upadhyaya, H D (2009) Breeding peanut for resistance to aflatoxin contamination at ICRISAT. Peanut Science, 36 (4). pp. 42-49. ISSN 0095-3679
Upadhyaya, H D and Ferguson, M E and Bramel, P J (2001) Status of the Arachis Germplasm Collection at ICRISAT. Peanut science, 28 (2). pp. 89-96. ISSN 0095-3679
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Monyo, E and Mponda, O and Ganesamurthy, K and Upadhyaya, H D and Janila, P (2015) Bulletin of Tropical Legumes. Tropical Legumes III, 02. 01-06.
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Silim, S N (2007) Patterns of diversity in pigeonpea (Cajanus cajan (L.) Millsp.) germplasm collected from different elevations in Kenya. Genetic Resources and Crop Evolution, 54 (8). pp. 1787-1795.
Upadhyaya, H D and Dwivedi, S L and Vadez, V and Hamidou, F and Singh, S and Varshney, R K and Liao, B (2014) Multiple Resistant and Nutritionally Dense Germplasm Identified from Mini Core Collection in Peanut. Crop Science, 54 (2). pp. 679-693. ISSN 1435-0653
Ramu, P and Billot, C and Rami, J F and Senthilvel, S and Upadhyaya, H D and Reddy, L A and Hash, C T (2013) Assessment of genetic diversity in the sorghum reference set using EST-SSR markers. TAG Theoretical and Applied Genetics, 126 (8). pp. 2051-2064. ISSN 1432-2242
Morris, G P and Ramu, P and Desphande, S and Hash, C T and Shah, T and Upadhyaya, H D and Riera-Lizarazu, O and Brown, P J and Acharjee, C B and Mitchell, S E and Harriman, J and Glaubitz, J C and Buckler, E S and Kresovich, S (2013) Population genomic and genome-wide association studies of agroclimatic traits in sorghum. Proceedings of the National Academy of Sciences, 110 (2). pp. 453-458. ISSN 1091-6490
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Nigam, S N and Waliyar, F and Aruna, R and Reddy, S V and Kumar, P L and Craufurd, P Q and Diallo, A T and Ntare, B R and Upadhyaya, H D (2009) Breeding peanut for resistance to aflatoxin contamination at ICRISAT. Peanut Science, 36 (4). pp. 42-49. ISSN 0095-3679
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Gowda, C L L and Haussmann, B I G (2009) Identification of geographical gaps in the pearl millet germplasm conserved at ICRISAT genebank from West and Central Africa. Plant Genetic Resources, 8 (1). pp. 45-51. ISSN 1479-2621
Vetriventhan, M and Upadhyaya, H D and Deshpande, S P and Johnson, M S and Wallace, J G and Victor, A and Naresh, D and Rayaprolu, L and Singh, K and Mayes, S (2024) Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.). Scientific Reports (TSI), 14. pp. 1-17. ISSN 2045-2322
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Upadhyaya, H D and Wang, L and Prakash, C S and Liu, Y and Gao, L and Meng, R and Seetharam, K and Gowda, C L L and Ganesamurthy, K and Singh, S K and Kumar, R and Li, J and Wang, Y (2022) Genome-wide association mapping identifies an SNF4 ortholog that impacts biomass and sugar yield in sorghum and sugarcane. Journal of Experimental Botany, 73 (11). pp. 3584-3596. ISSN 1460-2431
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Basu, U and Sharma, A and Bajaj, D and Malik, N and Jha, U C and Upadhyaya, H D and Parida, S K (2021) The DNA Replication, Repair, and Recombination Pathway Genes Modulating Yield and Stress Tolerance Traits in Chickpea. Plant Molecular Biology Reporter, 40. pp. 119-135. ISSN 1572-9818
Roorkiwal, M and Thudi, M and Gaur, P M and Upadhyaya, H D and Singh, N P and Varshney, R K (2015) Chickpea translational genomics in the ‘whole genome’ era. Legume Perspectives (7). pp. 7-9. ISSN 2340-1559
Rai, K N and Velu, G and Govindaraj, M and Upadhyaya, H D and Rao, A S and Shivade, H and Reddy, K N (2015) Iniadi pearl millet germplasm as a valuable genetic resource for high grain iron and zinc densities. Plant Genetic Resources, 13 (01). pp. 1-8. ISSN 1479-2621
Subba Rao, G V and Nakahara, K and Ando, Y and Sahrawat, K L and Deshpande, S P and Srinivasa Rao, P and Upadhyaya, H D and Hash, C T (2015) Biological nitrification inhibition (BNI) activity in sorghum: Potential role for enhancing nitrogen-use efficiency (NUE). In: Millets : Promotion for Food, Feed, Fodder, Nutritional and Environment Security, Proceedings of Global Consultation on Millets Promotion for Health & Nutritional Security. Society for Millets Research, ICAR Indian Institute of Millets Research, Hyderabad, pp. 91-96. ISBN 8189335529
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Bajaj, D and Saxena, M S and Kujur, A and Das, S and Badoni, S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea. Journal of Experimental Botany, 66 (5). pp. 1271-1290. ISSN 0022-0957
Upadhyaya, H D and Dwivedi, S L (2015) Global Perspectives on Groundnut Production, Trade, and Utilization: Constraints and Opportunities. In: National Seminar on Technologies for Enhancing Oilseeds Production Through NMOOP, January 18-19, 2015, PJTSAU, Hyderabad.
Kujur, A and Upadhyaya, H D and Shree, T and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2014) Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea. Scientific Reports, 5 (9468). pp. 1-13. ISSN 2045-2322
Roorkiwal, M and Nayak, S N and Thudi, M and Upadhyaya, H D and Brunel, D and Mournet, P and This, D and Sharma, P C and Varshney, R K (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers. Frontiers in Plant Science, 5 (248). pp. 1-11. ISSN 1664-462X
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2014) Determination of physical properties of chickpea seeds and their relevance in germplasm collections. Indian Journal of Plant Genetic Resources, 27 (1). pp. 1-9. ISSN 0976-1926
Nirgude, M and Kalyana Babu, B and Shambhavi, Y and Singh, U M and Upadhyaya, H D and Anil Kumar, . (2014) Development and molecular characterization of genic molecular markers for grain protein and calcium content in finger millet (Eleusine coracana (L.) Gaertn.). Molecular Biology Reports, 41 (3). pp. 1189-1200. ISSN 1573-4978
Upadhyaya, H D and Reddy, K N and Singh, Sube and Gowda, C L L and Ahmed, M I and Kumar, V (2014) Diversity and gaps in Pennisetum glaucum subsp. monodii (Maire) Br. germplasm conserved at the ICRISAT genebank. Plant Genetic Resources, 12 (2). pp. 226-235. ISSN 1479-2621
Upadhyaya, H D and Dwivedi, S L and Sharma, S and Lalitha, N and Singh, S and Varshney, R K and Gowda, C L L (2014) Enhancement of the use and impact of germplasm in crop improvement. Plant Genetic Resources: Characterization and Utilization, 12 (S1). S155-S159. ISSN 1479-2621
Roorkiwal, M and von Wettberg, E J and Upadhyaya, H D and Warschefsky, E and Rathore, A and Varshney, R K (2014) Exploring Germplasm Diversity to Understand the Domestication Process in Cicer spp. Using SNP and DArT Markers. PLoS ONE, 9 (7). pp. 1-10. ISSN 1932-6203
Upadhyaya, H D and Dwivedi, S L and Singh, S K and Singh, S and Vetriventhan, M and Sharma, S (2014) Forming Core Collections in Barnyard, Kodo, and Little Millets using Morphoagronomic Descriptors. Crop Science, 54 (6). pp. 2673-2682. ISSN 0011-183X
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Saxena, R K and von Wettberg, E and Upadhyaya, H D and Sanchez, V and Songok, S and Saxena, K B and Kimurto, P.K. and Varshney, R K (2014) Genetic Diversity and Demographic History of Cajanus spp. Illustrated from Genome-Wide SNPs. PLoS ONE, 9 (2). pp. 1-9. ISSN 1932-6203
Upadhyaya, H D and Dwivedi, S L and Ramu, P and Singh, S K and Singh, S (2014) Genetic Variability and Effect of Postflowering Drought on Stalk Sugar Content in Sorghum Mini Core Collection. Crop Science, 54 (5). pp. 2120-2130. ISSN 0011-183X
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic analysis for yield, nutritional and oil quality traits in RIL population of groundnut (Arachis hypogaea L.). Indian Journal of Genetics and Plant Breeding, 74 (4). pp. 450-455. ISSN 0019-5200
Upadhyaya, H D and Reddy, K N and Singh, S and Ahmed, M I and Kumar, V and Ramachandran, S (2014) Geographical Gaps and Diversity in Deenanath Grass(Pennisetum pedicellatum Trin.) Germplasm Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 27 (2). pp. 93-101. ISSN 0971-8184
Purushothaman, R and Upadhyaya, H D and Gaur, P M and Gowda, C L L and Krishnamurthy, L (2014) Kabuli and desi chickpeas differ in their requirement for reproductive duration. Field Crops Research, 163 (1). pp. 24-31. ISSN 0378-4290 (In Press)
Krishnamurthy, L and Upadhyaya, H D and Gowda, C L L and Kashiwagi, J and Purushothaman, R and Singh, Sube and Vadez, V (2014) Large variation for salinity tolerance in the core collection of foxtail millet (Setaria italica (L.) P. Beauv.) germplasm. Crop and Pasture Science, 65 (4). pp. 353-361. ISSN 1836-5795
Upadhyaya, H D and Reddy, K N and Singh, Sube and Gowda, C L L and Irshad Ahmed, M and Ramachandran, S (2014) Latitudinal patterns of diversity in the world collection of pearl millet landraces at the ICRISAT genebank. Plant Genetic Resources, 12 (1). pp. 91-102. ISSN 1479-263X
Upadhyaya, H D and Dwivedi, S L and Vadez, V and Hamidou, F and Singh, S and Varshney, R K and Liao, B (2014) Multiple Resistant and Nutritionally Dense Germplasm Identified from Mini Core Collection in Peanut. Crop Science, 54 (2). pp. 679-693. ISSN 1435-0653
Kim, D H and Kaashyap, M and Rathore, A and Das, R A and Parupalli, S and Upadhyaya, H D and Gopalakrishnan, S and Gaur, P M and Singh, S and Kaur, J and Yasin, M and Varshney, R K (2014) Phylogenetic diversity of Mesorhizobium in chickpea. Journal of Biosciences, 39 (3). pp. 1-5. ISSN 0250-5991
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Varshney, R K and Parzies, H K (2014) Population structure and linkage disequilibrium of ICRISAT foxtail millet (Setaria italica (L.) P. Beauv.) core collection. Euphytica, 196 (3). pp. 423-435. ISSN 1573-5060
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Tyagi, A K and Jain, M and Parida, S K (2014) An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genes for seed weight in chickpea. Molecular Breeding, 34 (1). pp. 241-265. ISSN 1572-9788
Krishnamurthy, L and Upadhyaya, H D and Purushothaman, R and Gowda, C L L and Kashiwagi, J and Dwivedi, S L and Singh, Sube and Vadez, V (2014) The extent of variation in salinity tolerance of the minicore collection of finger millet (Eleusine coracana L. Gaertn.) germplasm. Plant Science, 227. pp. 51-59. ISSN 0168-9452
Ramu, P and Billot, C and Rami, J F and Senthilvel, S and Upadhyaya, H D and Reddy, L A and Hash, C T (2013) Assessment of genetic diversity in the sorghum reference set using EST-SSR markers. TAG Theoretical and Applied Genetics, 126 (8). pp. 2051-2064. ISSN 1432-2242
Upadhyaya, H D and Wang, Y H and Gowda, C L L and Sharma, S (2013) Association mapping of maturity and plant height using SNP markers with the sorghum mini core collection. TAG Theoretical and Applied Genetics, 126 (8). pp. 2003-2015. ISSN 1432-2242
Hay, F R and Hamilton, N R S and Furman, B J and Upadhyaya, H D and Reddy, K N and Singh, S K (2013) Cereals. In: Conservation of Tropical Plant Species. Springer, New York, pp. 293-315. ISBN 978-1-4614-3776-5
Sharma, S and Upadhyaya, H D and Roorkiwal, M and Varshney, R K and Gowda, C L L (2013) Chickpea. In: Genetic and Genomic Resources of Grain Legume Improvement. Elsevier, London, UK, pp. 81-111. ISBN 978-0-12-397935-3
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Kiran Babu, T and Sharma, R and Upadhyaya, H D and Reddy, P N and Deshpande, S P and Senthilvel, S and Sarma, N D R K and Thakur, R P (2013) Evaluation of genetic diversity in Magnaporthe grisea populations adapted to finger millet using simple sequence repeats (SSRs) markers. Physiological and Molecular Plant Pathology, 84. pp. 10-18. ISSN 0885-5765
Gowda, C L L and Upadhyaya, H D and Sharma, S and Varshney, R K and Dwivedi, S L (2013) Exploiting genomic resources for efficient conservation and utilization of chickpea, groundnut, and pigeonpea collections for crop improvement. The Plant Genome, 6 (3). pp. 1-28. ISSN 1940-3372
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Ortiz, R (2013) Food, Nutrition and Agrobiodiversity Under Global Climate Change. Advances in Agronomy, 120. pp. 1-128.
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Jain, M and Tyagi, A K and Parida, S K (2013) Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping. DNA Research, 20 (4). pp. 355-374. ISSN 1756-1663
Upadhyaya, H D and Sharma, S and Dwivedi, S L (2013) Genetic Resources, Diversity and Association Mapping in Peanut. In: Genetics, Genomics and Breeding of Peanuts. CRC Press, pp. 13-36. ISBN 9781482238358
Wang, Y H and Upadhyaya, H D and Burrell, A M and Sahraeian, S M E and Klein, R R and Klein, P E (2013) Genetic Structure and Linkage Disequilibrium in a Diverse, Representative Collection of the C4 Model Plant, Sorghum bicolor. G3.Genes Genomes Genetics, 3 (5). pp. 783-793. ISSN 2160-1836
Sharma, S and Upadhyaya, H D and Gowda, C L L and Kumar, S and Singh, Sube (2013) Genetic analysis for seed size in three crosses of chickpea (Cicer arietinum L.). Canadian Journal of Plant Science, 93 (1). pp. 1-9. ISSN 1918-1833
Karunakaran, K R and Gracy, C P and Lokesha, H and Bantilan, M C S and Kumara Charyulu, D and Rao, P P and Nageswara Rao, G D and Vaithiyalingan, M and Nadaf, H L and Venkataramana, P and Upadhyaya, H D and Janila, P and Rao, K P C (2013) Groundnut Baseline and Early-Adoption Surveys in South Asia: Insights from TL-II (Phase-1) Project: Synthesis Report 2013. Monograph. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Hyderabad, Andhra Pradesh.
Sharma, R and Girish, A G and Upadhyaya, H D and Humayun, P and Kiran Babu, T and Rao, V P and Thakur, R P (2013) Identification of blast resistance in a core collection of foxtail millet germplasm. Plant Disease. ISSN 0191-2917
Upadhyaya, H D and Wang, Y-H and Sharma, R and Sharma, S (2013) Identification of genetic markers linked to anthracnose resistance in sorghum using association analysis. Theoretical and Applied Genetics, 126 (6). pp. 1649-1657. ISSN 0040-5752
Singh, M and Upadhyaya, H D and Bisht, I S (2013) Introduction. In: Genetic and Genomic Resources of Grain Legume Improvement. Elsevier Inc., pp. 1-10. ISBN 978-0-12-397935-3
Billot, C and Ramu, P and Bouchet, S and Chantereau, J and Deu, M and Gardes, L and Noyer, J L and Rami, J F and Rivallan, R and Li, Y and Lu, P and Wang, T and Folkertsm, R T and Arnaud, E and Upadhyaya, H D and Glaszmann, J C and Hash, C T (2013) Massive Sorghum Collection Genotyped with SSR Markers to Enhance Use of Global Genetic Resources. Plos ONE, 8 (4). pp. 1-16. ISSN 1932-6203
Upadhyaya, H D and Dronavalli, N and Dwivedi, S L and Kashiwagi, J and Krishnamurthy, L and Pande, S and Sharma, H C and Vadez, V and Singh, S and Varshney, R K and Gowda, C L L (2013) Mini Core Collection as a Resource to Identify New Sources of Variation. Crop Science, 53 (6). pp. 2506-2517. ISSN 1435-0653
Singh, Reema and Kumari, N and Upadhyaya, H D and Yadav, R and Vaishali, . and Choi, I and Kumar, R (2013) Molecular analysis for genetic structure of biotic and abiotic stress resistant genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology, 12 (4). pp. 537-540. ISSN 0975-0967
Krishnamurthy, L and Kashiwagi, J and Upadhyaya, H D and Gowda, C L L and Gaur, P M and Singh, Sube and Purushothaman, R and Varshney, R K (2013) Partitioning coefficient—A trait that contributes to drought tolerance in chickpea. Field Crops Research, 149. pp. 354-365. ISSN 0378-4290
Sharma, R and Upadhyaya, H D and Manjunatha, S V and Rai, K N and Gupta, S K and Thakur, R P (2013) Pathogenic variation in the pearl millet blast pathogen, Magnaporthe grisea and identification of resistance to diverse pathotypes. Plant Disease, 97 (2). pp. 189-195. ISSN 0191-2917
Sudini, H and Upadhyaya, H D and Gowda, C L L (2013) Peanut mini core collection at ICRISAT: A reality in identifying multiple disease resistance sources. In: 2013 APS-MSA Joint Meeting, 10-14 August 2013, Austin, Texas USA.
Upadhyaya, H D and Reddy, K N and Singh, Sube and Gowda, C L L (2013) Phenotypic diversity in Cajanus species and identification of promising sources for agronomic traits and seed protein content. Genetic Resources and Crop Evolution, 60 (2). pp. 639-659. ISSN 1573-5109
Upadhyaya, H D and Sharma, S and Reddy, K N and Saxena, R K and Varshney, R K and Gowda, C L L (2013) Pigeonpea. In: Genetic and Genomic Resources of Grain Legume Improvement. Elsevier, London, Uk, pp. 181-202. ISBN 978-0-12-397935-3
Morris, G P and Ramu, P and Desphande, S and Hash, C T and Shah, T and Upadhyaya, H D and Riera-Lizarazu, O and Brown, P J and Acharjee, C B and Mitchell, S E and Harriman, J and Glaubitz, J C and Buckler, E S and Kresovich, S (2013) Population genomic and genome-wide association studies of agroclimatic traits in sorghum. Proceedings of the National Academy of Sciences, 110 (2). pp. 453-458. ISSN 1091-6490
Sharma, S and Upadhyaya, H D and Varshney, R K and Gowda, C L L (2013) Pre-breeding for diversification of primary gene pool and genetic enhancement of grain legumes. Frontiers in Plant Science, 4 (309). pp. 1-14. ISSN 1664-462X
Kiran Babu, T and Thakur, R P and Upadhyaya, H D and Reddy, P N and Sharma, R and Girish, A G and Sarma, N D R K (2013) Resistance to blast (Magnaporthe grisea) in a mini-core collection of finger millet germplasm. European Journal of Plant Pathology, 135 (2). pp. 299-311. ISSN 1573-8469
Upadhyaya, H D and Wang, Y and Sharma, R and Sharma, S (2013) SNP markers linked to leaf rust and grain mold resistance in sorghum. Molecular Breeding, 32 (2). pp. 451-462. ISSN 1572-9788
Roorkiwal, M and Sawargaonkar, S L and Chitikineni, A and Thudi, M and Saxena, R K and Upadhyaya, H D and Vales, M I and Riera-Lizarazu, O and Varshney, R K (2013) Single Nucleotide Polymorphism Genotyping for Breeding and Genetics Applications in Chickpea and Pigeonpea using the BeadXpress Platform. The Plant Genome, 6 (2). pp. 1-10. ISSN 1940-3372
Khera, P and Upadhyaya, H D and Pandey, M K and Roorkiwal, M and Sriswathi, M and Janila, P and Guo, Y and McKain, M R and Nagy, E D and Knapp, S J and Leebens-Mack, J and Conner, J A and Ozias-Akins, P and Varshney, R K (2013) Single Nucleotide Polymorphism–based Genetic Diversity in the Reference Set of Peanut (Arachis spp.) by Developing and Applying Cost-Effective Kompetitive Allele Specific Polymerase Chain Reaction Genotyping Assays. The Plant Genome, 6 (3). pp. 1-11. ISSN 1940-3372
Kashiwagi, J and Krishnamurthy, L and Gaur, P M and Upadhyaya, H D and Varshney, R K and Tobita, S (2013) Traits of relevance to improve yield under terminal drought stress in chickpea (C. arietinum L.). Field Crops Research, 145 (1). pp. 88-95. ISSN 0378-4290
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Kajjidoni, S T and Patil, S S (2013) Validation of Biometrical Principles for Genetic Enhancement of Chickpea (Cicer arietinum L.). Indian Journal of Plant Genetic Resources, 26 (3). pp. 207-214. ISSN 0976-1926
Krishnamurthy, L and Kashiwagi, J and Tobita, S and Ito, O and Upadhyaya, H D and Gowda, C L L and Gaur, P M and Sheshshayee, M S and Singh, Sube and Vadez, V and Varshney, R K (2013) Variation in carbon isotope discrimination and its relationship with harvest index in the reference collection of chickpea germplasm. Functional Plant Biology, 14 (12). pp. 1350-1361. ISSN 1445-4408
Mir, R R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Kilian, A and Cook, D R and Varshney, R K (2013) Whole-genome scanning for mapping determinacy in Pigeonpea (Cajanus spp.). Plant Breeding, 132 (5). pp. 472-478. ISSN 1439-0523
Upadhyaya, H D and Reddy, K N and Sastry, D V S S R and Gowda, C L L (2013) The Wild Genepool of Pigeonpea at ICRISAT Genebank - Status and Distribution. Indian Journal of Plant Genetic Resources, 26 (3). pp. 193-201. ISSN 0976-1926
Huang, L and Jiang, H and Ren, X and Upadhyaya, H D and et al, . (2012) Abundant Microsatellite Diversity and Oil Content in Wild Arachis Species. Plos One, 7 (11). pp. 1-10. ISSN 1932-6203
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Varshney, R K and Kudapa, H and Roorkiwal, M and Thudi, M and Pandey, M K and Saxena, R K and Chamarthi, S K and Murali Mohan, S and Mallikarjuna, N and Upadhyaya, H D and Gaur, P M and Krishnamurthy, L and Saxena, K B and Nigam, S N and Pande, S (2012) Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies. Journal of Biosciences, 37 (5). pp. 811-820. ISSN 0973-7138
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Parzies, H K and Bharathi, A and Varshney, R K and Gowda, C L L (2012) Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection. Plant Genetic Resources, 10 (3). pp. 214-223. ISSN 1479-2621
Upadhyaya, H D and Wang, Y-H. and Sharma, S and Singh, Sube (2012) Association mapping of height and maturity across five environments using the sorghum mini core collection. Genome. 34 pp.. ISSN 1480-3321
Kiran Babu, T and Thakur, R P and Reddy, R P and Upadhyaya, H D and Girish, A G and Sarma, N D R K (2012) Development of a Field Screening Technique and Identification of Blast Resistance in Finger Millet Core Collection. Indian Journal of Plant Protection, 40 (1). pp. 45-51. ISSN 0253-4355
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Upadhyaya, H D (2012) Freezing for the Future: Conserving crop germplasm for the generations ahead. ICRISAT e-newsletters (SASA) (13).
Gowda, C L L and Upadhyaya, H D and Gaur, P M and Saxena, K B (2012) Genetic resources and genomics for enhancing the efficiency of crop improvement in grain legumes. In: VI International Conference on Legume Genetics and Genomics, 2-7 October 2012, Hyderabad, India.
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2012) Genetic variability studies in minicore collection of chickpea (Cicer arietinum L.) under different environments. Karnataka Journal of Agricultural Sciences, 25 (3). pp. 305-308. ISSN 0972-1061
Lalitha, N (2012) Genotypic and Phenotypic Diversity in Chickpea (Cicer arietinum l.) Reference Set. PHD thesis, International Crops Research Institute for the Semi-Arid Tropics.
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Kajjidoni, S T and Patil, S S (2012) Heterosis in relation to genetic divergence in minicore collections of Chickpea (Cicer arietinum L.). Indian Journal of Genetics and Plant Breeding , 72 (3). pp. 303-308. ISSN 0975-6906
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Divakara, B N and Upadhyaya, H D and Fandohan, B (2012) Identification and divergence studies of genotypes of Tamarindus indica (Fabaceae) with superior pod traits. International Journal of Biological and Chemical Sciences. pp. 1-19. (In Press)
Upadhyaya, H D (2012) Identification of Diverse Trait-Specific Germplasm for Use In Crop Improvement Using Mini Core Strategy. In: Visions for a Sustainable Planet ASA, CSSA and SSSA International Annual Meetings, 21-24 October 2012.
Wang, Y and Bible, P and Loganantharaj, R and Upadhyaya, H D (2012) Identification of SSR markers associated with height using pool-based genome-wide association mapping in sorghum. Molecular Breeding, 30 (1). pp. 281-292. ISSN 1572-9788
Upadhyaya, H D and Reddy, K N and Ahmed, K M and Gowda, C L L (2012) Identification of gaps in pearl millet germplasm from East and Southern Africa conserved at the ICRISAT genebank. Plant Genetic Resources, 10 (3). pp. 202-213. ISSN 1479-263X
Saxena, R K and Penmetsa, R V and Upadhyaya, H D and Kumar, Ashish and Varshney, R K and et al, . (2012) Large-Scale Development of Cost-Effective Single-Nucleotide Polymorphism Marker Assays for Genetic Mapping in Pigeonpea and Comparative Mapping in Legumes. DNA Research. pp. 1-13. ISSN 1756-1663
Hiremath, P J and Kumar, A and Penmetsa, R V and et al, . (2012) Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes. Plant Biotechnology Journal, 10 (6). pp. 716-732. ISSN 1467-7652
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Dronavalli, N and Gowda, C L L (2012) Latitudinal variation and distribution of photoperiod and temperature sensitivity for flowering in the world collection of pearl millet germplasm at ICRISAT genebank. Plant Genetic Resources, 10 (1). pp. 59-69. ISSN 1479-2621
Mallikarjuna, N and Srikanth, S and Vellanki, R K and Jadhav, D R and Das, K and Upadhyaya, H D (2012) Meiotic analysis of the hybrids between cultivated and synthetic tetraploid groundnuts. Plant Breeding, 131 (1). pp. 135-138. ISSN 1439-0523
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Upadhyaya, H D and Dronavalli, N and Gowda, C L L and Singh, Sube (2012) Mini Core Collections for Enhanced Utilization of Genetic Resources in Crop Improvement. Indian Journal of Plant Genetic Resources, 25 (1). pp. 111-124. ISSN 0976-1926
Sharma, M and Rathore, A and Mangala, U N and Ghosh, R and Sharma, S and Upadhyaya, H D and Pande, S (2012) New sources of resistance to Fusarium wilt and sterility mosaic disease in a mini-core collection of pigeonpea germplasm. European Journal of Plant Pathology, 133 (3). pp. 707-714. ISSN 1573-8469
Mukri, G and Nadaf, H L and Bhat, R S and Gowda, M V C and Upadhyaya, H D and Sujay, V (2012) Phenotypic and molecular dissection of ICRISAT mini core collection of peanut (Arachis hypogaea L.) for high oleic acid. Plant Breeding. 5 pp.. ISSN 1439-0523
Upadhyaya, H D and Kashiwagi, J and Varshney, R K and Gaur, P M and Saxena, K B and Krishnamurthy, L and Gowda, C L L and Pundir, R P S and et al, . (2012) Phenotyping chickpeas and pigeonpeas for adaptation to drought. Frontiers in Plant Physiology, 3 (179). pp. 1-10.
Gowda, C L L and Saxena, K B and Srivastava, R K and Upadhyaya, H D and Silim, S N (2012) Pigeonpea: From an Orphan to A Leader in Food Legumes. In: Biodiversity in Agriculture: Domestication, Evolution, and Sustainability. Cambridge University Press, New York, USA, pp. 362-373. ISBN 9780521764599
Sharma, R and Upadhyaya, H D and Manjunatha, S V and Rao, V P and Thakur, R P (2012) Resistance to foliar diseases in a Mini-core Collection of Sorghum Germplasm. Plant Disease, 96 (11). pp. 1629-13633. ISSN 0191-2917 (In Press)
Upadhyaya, H D and Wang, Y-H. and Sharma, S and Singh, Sube and Hasenstein, K H (2012) SSR markers linked to kernel weight and tiller number in sorghum identified by association mapping. Euphytica, 187. pp. 401-410. ISSN 1573-5060
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Upadhyaya, H D and Mukri, G and Nadaf, H L and Singh, Sube (2012) Variability and Stability Analysis for Nutritional Traits in the Mini Core Collection of Peanut. Crop Science, 52 (1). pp. 168-178. ISSN 0011-183X
Upadhyaya, H D and Dronavalli, N and Singh, Sube and Dwivedi, S L (2012) Variability and Stability for Kernel Iron and Zinc Contents in the ICRISAT Mini Core Collection of Peanut. Crop Science, 52 (6). pp. 2628-2637. ISSN 0011-183X
Upadhyaya, H D (2012) Wet or dry? Impact of conditioning seed in germplasm conservation strategies. SATrends ICRISAT's Monthly Newsletter (107). pp. 1-2.
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Upadhyaya, H D and Sharma, S and Dwivedi, S L (2011) Arachis. In: Wild Crop Relatives: Genomic and Breeding Resources Legume Crops and Forages. Springer Berlin Heidelberg, Berlin, Heidelberg, Germany, pp. 1-19. ISBN 978-3-642-14386-1
Upadhyaya, H D (2011) Conserving and using plant diversity. SATrend, ICRISAT, Patancheru, Andhra Pradesh, India.
Krishnamurthy, L and Turner, N C and Gaur, P M and Upadhyaya, H D and Varshney, R K and Siddique, K H M and Vadez, V (2011) Consistent Variation across Soil Types in Salinity Resistance of a Diverse Range of Chickpea (Cicer arietinum L.) Genotypes. Journal Of Agronomy And Crop Science, 197 (3). pp. 214-227.
Glaszmann, J C and Billot, C and Arnaud, E and et al, . (2011) Core Reference Sets Of Sorghum And Musa : From A Whole Collection To A Mini Core Collection And Back. In: Plant & Animal Genomes XIX Conference, 15-19 January 2011, San Diego, CA .
Upadhyaya, H D and Sharma, S and Gowda, C L L and Gopal Reddy, V and Singh, Sube (2011) Developing proso millet (Panicum miliaceum L.) core collection using geographic and morpho-agronomic data. Crop & Pasture Science, 62. pp. 383-389.
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Upadhyaya, H D and Yadav, D and Reddy, K N and Gowda, C L L and Singh, Sube (2011) Development of Pearl Millet Minicore Collection for Enhanced Utilization of Germplasm. Crop Science, 51. pp. 217-223. ISSN 0011-183X
Upadhyaya, H D and Reddy, K N and Pundir, R P S and Singh, Sube and Gowda, C L L and Irshad Ahmed, M (2011) Diversity and geographical gaps in Cajanus scarabaeoides (L.) Thou. germplasm conserved at the ICRISAT genebank. Plant Genetic Resources (First View Article). pp. 1-12. ISSN 1479-2621
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2011) Genetic Divergence under Three Environments in a Minicore Collection of Chickpea (Cicer arietinum L.). Indian Journal of Plant Genetic Resources, 24 (2). pp. 177-185. ISSN 0971-8184
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2011) Genetic Variability Studies in Minicore Collections of Chickpea (Cicer arietinum L.) under Different Environments. Indian Journal of Plant Genetic Resources, 24 (1). pp. 43-48. ISSN 0976-1926
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Upadhyaya, H D and Thudi, M and Dronavalli, N and Gujaria, N and Singh, Sube and Sharma, S and Varshney, R K (2011) Genomic tools and germplasm diversity for chickpea improvement. Plant Genetic Resources : Characterization and Utilization, 9 (1). pp. 45-58.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2011) Germplasm conservation strategies – impact of conditioning on the viability of dry pearl millet seeds. Journal of SAT Agricultural Research, 9. 4pp. ISSN 0973-3094
Kumar, S and Malik, J and Thakur, P and Kaistha, S and Sharma, K D and Upadhyaya, H D (2011) Growth and metabolic responses of contrasting chickpea (Cicer arietinum L.) genotypes to chilling stress at reproductive phase. Acta Physiologiae Plantarum, 33 (3). pp. 779-787.
Upadhyaya, H D and Dronavalli, N and Gowda, C L L and Singh, Sube (2011) Identification and evaluation of chickpea germplasm for tolerance to heat stress. Crop Science, 51 (5). pp. 2079-2094. ISSN 1435-0653
Divakara, B N and Upadhyaya, H D and Krishnamurthy, R (2011) Identification and evaluation of diverse genotypes in Pongamia pinnata (L.) Pierre. for genetic improvement in seed traits. Journal of Biodiversity and Ecological Sciences, 1 (3). pp. 179-190. ISSN 2008-9287
Gowda, C L L and Upadhyaya, H D and Dronavalli, N and Singh, Sube (2011) Identification of Large-Seeded High-Yielding Stable Kabuli Chickpea Germplasm Lines for Use in Crop Improvement. Crop Science, 51 (1). pp. 198-209. ISSN 0011-183X
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Sharma, S and Singh, Sube and Singh, Murari (2011) Inheritance of drought resistance related traits in two crosses of groundnut (Arachis hypogaea L.). Euphytica, 177 (1). pp. 55-66.
Jorge, M A and Claessens, G and Hanson, J and Dulloo, M E and Goldberg, E and Thormann, I and Dumet, D and Roux, N and Rudebjer, P and Hamilton, R S and Sanchez, I and Sharma, S and Taba, S and Upadhyaya, H D and Houwe, V D (2011) Knowledge Sharing on Best Practices for Managing Crop Genebanks. Agricultural Information Worldwide, 3 (2). pp. 101-106. ISSN 2075-7751
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Upadhyaya, H D and Sharma, S and Gowda, C L L (2011) Major genes with additive effects for seed size in kabuli chickpea (Cicer arietinum L.). Journal of Genetics, 90 (3). pp. 479-482.
Upadhyaya, H D and Kashiwagi, J and Krishnamurthy, L and Vadez, V and Pande, S and Thakur, R P and Sharma, R and Sharma, H C and Sahrawat, K L and Gowda, C L L (2011) Mini Core collection - an International Public Good-2011. Documentation. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Andhra Pradesh.
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Bharathi, A (2011) Phenotypic and Genotypic Diversity of Global Finger Millet (Eleusine coracana (L.) Gaertn. ) Composite Collection. PHD thesis, Tamil Nadu Agricultural University.
Vetriventhan, M (2011) Phenotypic and genetic diversity in the foxtail millet (setaria italica (l.) p. beauv.) core collection). PHD thesis, Tamil Nadu Agricultural University.
Seetharam, K (2011) Phenotypic assessment of sorghum (Sorghum bicolor L. Moench) germplasm reference set for yield and related traits under post flowering drought conditions. PHD thesis, Tamil Nadu Agricultural University.
Upadhyaya, H D and Dwivedi, S L and Nadaf, H L and Singh, Sube (2011) Phenotypic diversity and identification of wild Arachis accessions with useful agronomic and nutritional traits. Euphytica, 82 (1). pp. 103-115. ISSN 0014-2336
Upadhyaya, H D and Reddy, K N and Sharma, S and Varshney, R K and Bhattacharjee, R and Singh, Sube and Gowda, C L L (2011) Pigeonpea composite collection and identification of germplasm for use in crop improvement programmes. Plant Genetic Resources, 9 (1). pp. 97-108. ISSN 1479-2621
Upadhyaya, H D and Dronavalli, N and Sharma, S and Singh, S K and Singh, Sube and Gowda, C L L (2011) Plant Genetic Resources for Food and Nutritional Security. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Mallikarjuna, N and Senapathy, S and Jadhav, D R and Saxena, K B and Sharma, H C and Upadhyaya, H D and Rathore, A and Varshney, R K (2011) Progress in the utilization of Cajanus platycarpus Benth.) Maesen in pigeonpea improvement. Plant Breeding, 130 (5). pp. 507-514.
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2011) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 121 (5). pp. 971-984.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2011) Rescuing and regenerating germplasm in large collections – the case of pigeonpea accession ICP 9820. Journal of SAT Agricultural Research, 9. 3pp. ISSN 0973-3094
Upadhyaya, H D (2011) Search for the sorghum stoic. SATrend, ICRISAT, Patancheru, Andhra Pradesh, India.
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Krishnamurthy, L and Upadhyaya, H D and Saxena, K B and Vadez, V (2011) Variation for temporary waterlogging response within the mini core pigeonpea germplasm. Journal of Agricultural Science. pp. 1-8. ISSN 1469-5146
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Yadav, D (2011) Wild Genepool of Pearl Millet at ICRISAT Genebank. Documentation. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Andhra Pradesh.
Vadez, V and Krishnamurthy, L and Hash, C T and Upadhyaya, H D and Borrell, A K (2011) Yield, transpiration efficiency, and water-use variations and their interrelationships in the sorghum reference collection. Crop and Pasture Science, 62 (8). pp. 645-655. ISSN 1836-5795
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Gowda, C L L and Dar, W D and Upadhyaya, H D and Yadav, D (2010) Biodiversity and Achieving the UNMDG of halving hunger and poverty by 2015. In: nternational Conference on Biodiversity in relation to food & human security in a warming planet, 15-17 Feb.2010, MSSRF, Chennai, India.
Divakara, B N and Upadhyaya, H D and Wani, S P and Gowda, C L L (2010) Biology and genetic improvement of Jatropha curcas L.: A review. Applied Energy, 87 (3). pp. 732-742.
Upadhyaya, H D and Reddy, K N and Sastry, D V S S R and Gowda, C L L (2010) Cajanus genepool at ICRISAT genebank. Documentation. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Andhra Pradesh.
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T and Patil, B C (2010) Characterization of drought tolerant accessions identified from the minicore of chickpea (Cicer arietinum L.). The Indian Journal of Genetics and Plant Breeding, 70 (2). pp. 125-131. ISSN 0019-5200
Meena, H P and Kumar, J and Upadhyaya, H D and Bharadwaj, C and Chauhan, S K and Verma, A K and Rizvi, A H (2010) Chickpea mini core germplasm collection as rich sources of diversity for crop improvement. Journal of SAT Agricultural Research, 8. pp. 1-5.
Kumar, S and Nayyar, H and Bhanwara, R K and Upadhyaya, H D (2010) Chilling stress effects on reproductive biology of chickpea. Journal of SAT Agricultural Research, 8. pp. 1-14. ISSN 0973-3094
Jiang, H and Ren, X and Zhang, X and Huang, J and Lei, Y and Yan, L and Liao, B and Upadhyaya, H D and Holbrook, C C (2010) Comparison of genetic diversity based on SSR markers between peanut mini core collections from China and ICRISAT. Acta Agronomica Sinica, 36 (7). pp. 1084-1091. ISSN 1875-2780
Horna, D and Upadhyaya, H D and Sastry, D V S S R and Reddy, G V and Singh, Sube and Reddy, K N and Gowda, C L L (2010) Conservation and Management of Genetic Resources of Sorghum, Pearl millet, Chickpea, Pigeonpea, Groundnut and other Small millets in the ICRISAT Genebank. In: Evaluating Cost-Effectiveness of Collection Management: Ex-situ Conservation of Plant Genetic Resources in the CG System. Consultative Group on International Agricultural Research, pp. 44-56.
Gowda, C L L and Upadhyaya, H D and Sharma, S (2010) Conservation and Use of Agrobiodiversity in Semi-Arid Tropic Regions. Documentation. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Horna, D and Debouck, D and Dumet, D and et al, . (2010) Cost Effectiveness of Germplasm Collections in the CG System. Section 9. In: Evaluating Cost-Effectiveness of Collection Management: Ex-situ Conservation of Plant Genetic Resources in the CG System. Consultative Group on International Agricultural Research, pp. 100-115.
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Hui-Fang, J and Xiao-Ping, R and Sheng-Yu, W and Xiao-Ji, Z and Jia-Quan, H and Bo-Shou, L and Holbrook, C C and Upadhyaya, H D (2010) Development and Evaluation of Peanut Germplasm with Resistance to Aspergillus flavus from Core Collection. Acta Agronomica Sinica, 36 (3). pp. 428-434. ISSN 0496-3490
Dwivedi, S and Upadhyaya, H D and Subudhi, P and Gehring, C and Bajic, V and Ortiz, R (2010) Enhancing Abiotic Stress Tolerance in Cereals Through Breeding and Transgenic Interventions. Plant Breeding Reviews, 33. pp. 31-114.
Ravi, K and Upadhyaya, H D and Dwivedi, S L and Hoisington, D A and Varshney, R K (2010) Genetic relationships among seven sections of genus Arachis studied by using SSR markers. BMC Plant Biology, 10 (15). pp. 1-12.
Prasad, P V V and Kakani, V G and Upadhyaya, H D (2010) Growth and production of groundnut. In: Soils, Plant Growth and Crop Production. Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices of the UNESCO , Oxford UK, pp. 1-26.
Bohra, A and Mallikarjuna, N and Saxena, K B and Upadhyaya, H D and Vales, I and Varshney, R K (2010) Harnessing the Potential of Crop Wild Relatives through Genomics Tools for Pigeonpea Improvement. Journal of Plant Biology, 37 (1). pp. 83-98.
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Singh, Sube (2010) Identification and evaluation of vegetable type pigeonpea (Cajanus cajan (L.) Millsp.) in the world germplasm collection at ICRISAT genebank. Plant Genetic Resources, 8 (2). pp. 162-170.
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Gowda, C L L (2010) Identification of gaps in pearl millet germplasm from Asia conserved at the ICRISAT genebank. Plant Genetic Resources, 8 (3). pp. 267-276. ISSN 1479-263X
Imtiaz, M and kharkwal, M C and Upadhyaya, H D (2010) Key access and utilization descriptors for chickpea genetic resources. Web Article. pp. 1-6.
Upadhyaya, H D and Yadav, D and Dronavalli, N and Gowda, C L L and Singh, Sube (2010) Mini core germplasm collections for infusing genetic diversity in plant breeding programs. Electronic Journal of Plant Breeding, 1 (4). pp. 1294-1309. ISSN 0975-928X
Upadhyaya, H D and Kashiwagi, J and Varshney, R K and Gaur, P M and Saxena, K B and Krishnamurthy, L and Gowda, C L L and Pundir, R P S and Chaturvedi, S K and Basu, P S and Singh, I P (2010) Phenotyping chickpeas and pigeonpeas for adaptation to drought. In: Drought phenotyping in crops: from theory to practice. Generation Challenge Programme, pp. 347-355.
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Bonham, C A and Dulloo, E and Mathur, P and Brahmi, P and Tyagi, V and Tyagi, R K and Upadhyaya, H D (2010) Plant Genetic Resources and Germplasm Use in India. Asian Biotechnology and Development Review, 12 (3). pp. 17-34.
Sharma, R and Rao, V P and Upadhyaya, H D and Reddy, V G and Thakur, R P (2010) Resistance to Grain Mold and Downy Mildew in a Mini-Core Collection of Sorghum Germplasm. Plant Disease, 94 (4). pp. 439-444. ISSN 0191-2917
Dwivedi, S L and Perotti, E and Upadhyaya, H D and Ortiz, R (2010) Sexual and apomictic plant reproduction in the genomics era: exploring the mechanisms potentially useful in crop plants. Sexual Plant Reproduction, 23 (4). pp. 265-279. ISSN 1432-2145
Kashiwagi, J and Upadhyaya, H D and Krishnamurthy, L (2010) Significance and genetic diversity of SPAD chlorophyll meter reading in chickpea germplasm in the semi-arid environments. Journal of Food Legumes, 23 (2). pp. 99-105. ISSN 0970-6380
Krishnamurthy, L and Kashiwagi, J and Gaur, P M and Upadhyaya, H D and Vadez, V (2010) Sources of tolerance to terminal drought in the chickpea (Cicer arietinum L.) minicore germplasm. Field Crops Research, 119. pp. 322-330.
Upadhyaya, H D and Sharma, S and Ramulu, B and Bhattacharjee, R and Gowda, C L L and Reddy, V G and Singh, Sube (2010) Variation for qualitative and quantitative traits and identification of trait-specific sources in new sorghum germplasm. Crop and Pasture Science, 61 (8). pp. 609-618.
Dwivedi, S L and Upadhyaya, H D and Gowda, C L L (2009) Approaches to enhance the value of genetic resources in crop improvement. In: Strengthening information on Plant Genetic Resources in Asia, 2009, Bangkok, Thailand.
Upadhyaya, H D and Gowda, C L L and Reddy, K N and Singh, Sube (2009) Augmenting the pearl millet core collection for enhancing germplasm utilization in crop improvement. Crop Science, 49 (2). pp. 573-580.
Subbarao, G V and Hossain, Z A K M and Nakahara, K and Ishikawa, T and Yanbuaban, M and Yoshihashi, T and Ono, H and Mitsuru, Y and Hash, C T and Upadhyaya, H D and Srinivasa, P and Reddy, B V S and Ito, O and Sahrawat, K L (2009) Biological Nitrification Inhibition (BNI) Potential in Sorghum. In: The Proceedings of the International Plant Nutrition Colloquium XVI, Department of Plant Sciences, UC Davis, 2009, UC Davis,California,United States.
Divakara, B N and Upadhyaya, H D and Wani, S P and Gowda, C L L (2009) Biology and genetic improvement of Jatropha curcas L.: a review. Applied Energy. pp. 1-11.
Nigam, S N and Waliyar, F and Aruna, R and Reddy, S V and Kumar, P L and Craufurd, P Q and Diallo, A T and Ntare, B R and Upadhyaya, H D (2009) Breeding peanut for resistance to aflatoxin contamination at ICRISAT. Peanut Science, 36 (4). pp. 42-49. ISSN 0095-3679
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Reddy, V G and Upadhyaya, H D and Gowda, C L L and Singh, Sube (2009) Characterization of eastern African finger millet germplasm for qualitative and quantitative characters at ICRISAT. Journal of SAT Agricultural Research, 7. 9pp.. ISSN 0973-3094
Upadhyaya, H D (2009) Composite collection of Chickpea. Grain Legumes. p. 1.
Upadhyaya, H D (2009) Composite collection of Finger Millet. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Composite collection of Foxtail Millet. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Composite collection of Groundnut. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Composite collection of Pearl Millet. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Composite collection of Pigeonpea. Grain Legumes(Web Article). pp. 1-2.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Pundir, R P S and Dwivedi, S L and Gowda, C L L and Reddy, V G and Singh, Sube (2009) Developing a mini core collection of sorghum for diversified utilization of germplasm. Crop Science, 49 (5). pp. 1769-1780.
Aruna, R and Rao, D M and Sivaramakrishnan, S and Reddy, L J and Bramel, P and Upadhyaya, H D (2009) Efficiency of three DNA markers in revealing genetic variation among wild Cajanus species. Plant Genetic Resources, 7 (2). pp. 113-121.
Upadhyaya, H D and Dwivedi, S L and Varshney, R K and Gowda, C L L and Bhattacharjee, R and Hoisington, D A and Vadez, V (2009) Enhancing the value of legume genetic resources using core/mini core and applied genomic tools. In: International conference on Current trends in Biotechnology, 19-21 Feb. 2009, Meerut, India.
Upadhyaya, H D and Dwivedi, S L and Gowda, C L L and Singh, Sube and Reddy, K N (2009) Enhancing the value of plant genetic resources of chickpea, pigeonpea and groundnut. In: Milestones in food legume Research. Indian Institute of Pulses Research, Kanpur, India, pp. 178-205.
Challinor, A J and Wheeler, T and Hemming, D and Upadhyaya, H D (2009) Ensemble yield simulations: crop and climate uncertainties, sensitivity to temperature and genotypic adaptation to climate change. Climate Research (CR), 38 (2). pp. 117-127. ISSN 0936-577X
Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Reddy, V G and Singh, Sube (2009) Establishing a core collection of foxtail millet to enhance the utilization of germplasm of an underutilized crop. Plant Genetic Resources, 7 (2). pp. 177-184.
Upadhyaya, H D and Dwivedi, S L and Gopalakrishnan, S and Gowda, C L L (2009) Exploiting Agrobiodiversity to meet new challenges to Agricultural Production in 21st century. In: International Annual Meetings: Footints in the Landscape: Sustainability through plant and soil sciences, November 1-5, 2009, Pittsburgh, PA.
Kashiwagi, J and Krishnamurthy, L and Upadhyaya, H D and Chandra, S and Gaur, P M (2009) Genetic control of drought avoidance root traits in chickpea (Clcerarletinum L.). In: Proceedings of the Fourth International Food Legumes Research Conferenece, 18-22 October 2005, New Delhi, India.
Ashok Kumar, A and Reddy, B V S and Ramaiah, B and Sanjana Reddy, P and Sahrawat, K L and Upadhyaya, H D (2009) Genetic variability and plant character association of grain Fe and Zn in selected core collection accessions of sorghum germplasm and breeding lines. Journal of SAT Agricultural Research, 7. pp. 1-4. ISSN 0973-3094
Upadhyaya, H D and Gowda, C L L and Sastry, D V S S R (2009) ICRISAT Genebank- Conserving Biodiversity for Food Security. APAARI Newsletter, 18 (1). pp. 5-6. ISSN 0858-6063
Upadhyaya, H D and Reddy, K N and Irshad Ahmed, M and Gowda, C L L and Haussmann, B I G (2009) Identification of geographical gaps in the pearl millet germplasm conserved at ICRISAT genebank from West and Central Africa. Plant Genetic Resources, 8 (1). pp. 45-51. ISSN 1479-2621
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Upadhyaya, H D and Gowda, C L L (2009) Managing and Enhancing the Use of Germplasm – Strategies and Methodologies. Monograph. International Crops Research Institute for the Semi-Arid Tropics.
Upadhyaya, H D and Sharma, S and Gowda, C L L (2009) Mini Core Collection: An International Public Good to Enhance User of Germplasm in Crop Improvement. In: National Symposium on Recent Global Developments in the Mangement of Plant Genetic Resource, December 17-18, 2009, New Delhi.
Upadhyaya, H D and Pundir, R P S and Dwivedi, S L and Gowda, C L L (2009) Mini Core Collections for Efficient Utilization of Plant Genetic Resources in Crop Improvement Programs. Information Bulletin No. 78. Monograph. International Crops Research Institute for the Semi-Arid Tropics.
Upadhyaya, H D (2009) Mini Core collection of Chickpea. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Mini Core collection of Pearl Millet. Grain Legumes. p. 1.
Upadhyaya, H D (2009) Mini Core collection of Pigeonpea. Grain Legumes(Web Article).
Upadhyaya, H D (2009) Mini Core collection of Sorghum. Grain Legumes(Web Article). p. 1.
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Upadhyaya, H D and Reddy, K N (2009) Pearl millet germplasm collection, conservation, characterization and utilization in Crop Improvement. Monograph. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh India. (Unpublished)
Upadhyaya, H D and Reddy, L J and Dwivedi, S L and Gowda, C L L and Singh, Sube (2009) Phenotypic diversity in cold-tolerant peanut (Arachis hypogaea L.) germplasm. Euphytica, 165 (2). pp. 279-291.
Upadhyaya, H D (2009) Reference Set of Chickpea. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Reference Set of Groundnut. Grain Legumes(Web Article). p. 1.
Upadhyaya, H D (2009) Reference Set of Pearl Millet. Grain Legumes. p. 1.
Upadhyaya, H D (2009) Reference Set of Pigeonpea. Grain Legumes(web Article). p. 1.
Upadhyaya, H D (2009) Reference Set of Sorghum. Grain Legumes(web Article). p. 1.
Upadhyaya, H D (2009) Sustainable conservation and utilization of genetic resources of two underutilized crops – finger millet and foxtail millet – to enhance productivity, nutrition and income in Africa and Asia. Documentation. Deutsche Gesellschaft für technische Zusammenarbeit.
Upadhyaya, H D and Dwivedi, S L and Baum, M and Varshney, R K and Udupa, S M and Gowda, C L L and Prasanth, V P and Furman, B J and Hoisington, D A and Chndra, S and Singh, Sube (2008) Allelic Richness and Diversity in Global Composite Collection and Reference Sets in Chickpea (Cicer Arietinum L.). In: 5th International Crop Science Congress & Exhibition, Jeju, Korea, 13-18 April 2008.
Gowda, C L L and Upadhyaya, H D and Dwivedi, S L (2008) Biodiversity and crop improvement: An Integrated Approach to Enhance use of Plant Genetic Resources for Sustainable Food Production. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh India.
Ortiz, R and Ban, T and Bandyopadhyay, R and Banziger, M and Bergvinson, D and Hell, K and James, B and Jeffers, D and Kumar, P L and Menkir, A and Murakami, J and Nigam, S N and Upadhyaya, H D and Waliyar, F (2008) CGIAR Research-for-Development Program on Mycotoxins. In: Mycotoxins: detection methods, management, public health and agricultural trade. CAB International Publishing, Wallingford Oxfordshire, UK, pp. 415-424. ISBN 9781845930820
Jarvis, A and Upadhyaya, H D and Gowda, C L L and Agrawal, P K and Fujisaka, S and Anderson, B (2008) Climate change and its effect on conservation and use of plant genetic resources for food and agriculture and associated biodiversity for food security. Monograph. Food and Agriculture Organization of the United Nations , UK.
Kaur, G and Kumar, S and Nayyar, H and Upadhyaya, H D (2008) Cold Stress Injury during the Pod-Filling Phase in Chickpea (Cicer arietinum L.): Effects on Quantitative and Qualitative Components of Seeds. Journal of Agronomy and Crop Science, 194 (6). pp. 457-464. ISSN 1439-037x
Upadhyaya, H D (2008) Completing genotyping of composite germplasm set of chickpea. Genetic diversity of global genetic resources. pp. 47-49.
Khedikar, Y P and Patgar, K V and Gowda, M C V and Upadhyaya, H D and Varshney, R K (2008) Construction of a genetic linkage map and QTL analysis for late leaf spot and rust in groundnut (Arachis hypogaea L.). In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Upadhyaya, H D (2008) Crop Germplasm and wild relatives: a source of novel variation for crop improvement. Korean journal of crop science, 53. pp. 12-17. ISSN 0252-9777
Upadhyaya, H D (2008) Developing Genetic And Genomic Resources In Chickpea For Improving Crop Productivity In Sub- Saharan Africa And Asia. Manual. International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Dwivedi, S L and Puppala, N and Upadhyaya, H D and Manivannan, N and Singh, Sube (2008) Developing a core collection of peanut specific to Valencia market type. Crop Science, 48 (2). pp. 625-632.
Upadhyaya, H D (2008) Development and genotyping of composite collection of pearl millet (Pennisetum glaucum (L.)R. Br.). Generation Challenge Program: Genetic diversity of global genetic resources. pp. 67-69.
Hash, C T and Ramu, P and Folkertsma, R T and et al, . (2008) Diversity analysis of the sorghum global composite collection and reference set. In: 2008 Annual Research Meeting Generation Challege Programme, 16th-20th September 2008 , Bangkok, Thiland.
Upadhyaya, H D and Gowda, C L L and Reddy, V G and Singh, Sube (2008) Diversity of small millets germplasm in genebank at ICRISAT. In: 5th International Symposium on New Crops and Uses: their role in a rapidly changing world, 3-4 September, 2007, University of Southampton, Southampton, UK.
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Kashiwagi, J and Krishnamurthy, L and Gaur, P M and Chandra, S and Upadhyaya, H D (2008) Estimation of gene effects of the drought avoidance root characteristics in chickpea (C. arietinum L.). Field Crops Research, 105 (1-2). pp. 64-69. ISSN 03784290
Sreelatha, E and Gowda, C L L and Gour, T B and Sharma, H C and Ramesh, S and Upadhyaya, H D (2008) Genetic analysis of pod borer (Helicoverpa armigera) resistance and grain yield in desi and kabuli chickpeas (Cicer arietinum) under unprotected conditions. Indian Journal of Genetics and Plant Breeding, 68 (4). pp. 406-413.
Puppala, N and Upadhyaya, H D and Dwivedi, S L and Kottapalli, K R and Payton, P and Burow, M (2008) Genetic enhancement of Valencia core collection and molecular characterization of U.S. peanut mini core collection using SSR markers. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Gowda, M V C and Khedikar, Y P and Kusuma, V P and Sujay, V and Bhat, S and Upadhyaya, H D and Varshney, R K (2008) Genetic enhancement of resistance to foliar diseases. In: Third International Conference of the Peanut Research Community On Advances in Arachis through Genomics and Biotechnology (AAGB – 2008), 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Upadhyaya, H D and Dwivedi, S L and Baum, M and Varshney, R K and Udupa, S M and Gowda, C L L and Hoisington, D A and Singh, Sube (2008) Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.). BMC Plant Biology, 8 (106). pp. 1-12.
Gopal Reddy, K (2008) Genetics of SCMR AND SLA, the Traits Related To Drought Tolerance in Groundnut (Arachis hypogaea L.). Masters thesis, University of Agricultural Sciences, Bangalore.
Burow, M D and Selvaraj, M G and Upadhyaya, H D and Ozias-Akins, P and Guo, B and Bertioli, D J and Leal-Bertioli, S C M and Moretzsohn, M C and Guimaraes, P M (2008) Genomics of Peanut, a Major Source of Oil and Protein. In: Genomics of Tropical Crop Plants. Springer New York, New York, USA, pp. 421-440. ISBN 978-0-387-71218-5
Upadhyaya, H D (2008) Genotyping of composite collection of finger millet [Eleusine coracana (L.) Gaertn]. In: Generation Challenge Program Annual Research Meeting, 12-16 September 2006, Sao Paulo, Brazil.
Upadhyaya, H D (2008) Genotyping of composite collection of foxtail millet [Setaria italica (L). P. Beauv.]. In: Generation Challenge Program Annual Research Meeting, July 2008, Centro Internacional de Mejoramiento de Maíz y Trigo, México.
Rao, N K and Upadhyaya, H D and Sastry, D V S S R and et al, . (2008) A Global Experiment to Explore Ultra Dry Seed Storage Technology and Optimum Condition for Seed Storage Perspectives after 14 Year. Documentation. International Crops Research Institute for the Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Upadhyaya, H D and Gowda, C L L and Sastry, D V S S R (2008) Management of Germplasm Collections and Enhancing Their Use by Mini Core and Molecular Approaches. In: Capacity Building for Risk Management Systems on Genetic Resources : proceedings of the APEC-ATCWG Workshop, October 14-17, 2008, Taichung, Chinese Taipei.
Upadhyaya, H D (2008) Molecular characterisation of groundnut (Arachis hypogaea L.) composite collection. In: Generation Challenge Program Annual Research Meeting, 12–16 September 2007, Sao Paulo, Brazil.
Upadhyaya, H D (2008) Molecular characterisation of pigeonpea (Cajanus cajan) composite collection. In: Generation Challenge Program Annual Research Meeting, 12–16 September 2007, Sao Paulo, Brazil.
Khedikar, Y P (2008) Molecular tagging and mapping of resistance to late leaf spot and rust in groundnut (Arachis hypogaea L.). PHD thesis, University of Agricultural Sciences.
Hui-Fang, J and Xiao-Ping, R and Bo-Shou, L and Jia-Quan, H and Yong, L and Ben-Yin, C and Guo, B Z and Holbrook, C C and Upadhyaya, H D (2008) Peanut Core Collection Established in China and Compared with ICRISAT Mini Core Collection. Acta Agronomica Sinica, 34 (1). pp. 25-30. ISSN 0496-3490
Vadez, V and Krishnamurthy, L and Ratnakumar, P and Rao, S and Devi, J M and Srivastava, N and Sharma, K K and Bhatnagar-Mathur, P and Varshney, R K and Upadhyaya, H D and Aruna, R and Nigam, S N (2008) Phenotypic assessment of groundnut response to key abiotic stress. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Upadhyaya, H D and Lalitha, N and Varshney, R K and Sharma, H C and Kashiwagi, J and Gowda, C L L and Dwivedi, S L (2008) Phenotyping reference set of chickpea (Cicer arietinum L.) for agronomic traits including resistance to legume pod borer (Helicoverpa armigera). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Upadhyaya, H D and Bharathi, A and Gowda, C L L and Varshney, R K and Dwivedi, S L (2008) Phenotyping reference set of foxtail millet (Setaria italica) for Agronomic Traits. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Upadhyaya, H D (2008) Phenotyping sorghum reference set for drought tolerance. In: Generation Challenge Program Annual Research Meeting, 12-16 September 2006, Sao Paulo, Brazil.
Upadhyaya, H D and Gowda, C L L and Sastry, D V S S R (2008) Plant genetic resources management: collection, characterization, conservation and utilization. Journal of SAT Agricultural Research, 6. 16pp.. ISSN 0973-3094
Kashiwagi, J and Krishnamurthy, L and Upadhyaya, H D and Gaur, P M (2008) Rapid screening technique for canopy temperature status and its relevance to drought tolerance improvement in chickpea. Journal of SAT Agricultural Research, 6. pp. 105-4. ISSN 0973-3094
Upadhyaya, H D and Reddy, V G and Sastry, D V S S R (2008) Regeneration Guidelines Finger Millet. In: Crop specific regeneration guidelines [CD-ROM]. CGIAR System-wide Genetic Resource Programme, Rome, Italy, pp. 1-7.
Upadhyaya, H D and Reddy, K N and Sastry, D V S S R (2008) Regeneration guidelines: pearl millet. In: Crop specific regeneration guidelines [CD-ROM]. CGIAR System-wide Genetic Resource Programme, Rome, Italy, pp. 1-9.
Upadhyaya, H D and Reddy, K N and Sastry, D V S S R (2008) Regeneration guidelines: pigeon pea. In: Crop specific regeneration guidelines [CD-ROM]. CGIAR System-wide Genetic Resource Programme, Rome, Italy, pp. 1-8.
Upadhyaya, H D and Reddy, V G and Sastry, D V S S R (2008) Regeneration guidelines: sorghum. In: Crop specific regeneration guidelines [CD-ROM]. CGIAR System-wide Genetic Resource Programme, Rome, Italy, pp. 1-8.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2008) Seed viability of active collections in ex-situ genebanks: an analysis of sorghum germplasm conserved at ICRISAT genebank. Journal of SAT Agricultural Research, 6. 8pp.. ISSN 0973-3094
Sujay, V and Kusuma, V P and Yugandhar, G and Sujatha, B and Gowda, M V C and Upadhyaya, H D (2008) Selection of accessions from minicore to improve disease resistance in groundnut. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
This, D and Courtois, B and Philippe, R and et al, . (2008) Some Data On Allele Diversity At Orthologous Candidate Genes In GCP Crops. In: Plant & Animal Genomes XVIII Conference, 9-13 January 2010, San Diego, CA.
Upadhyaya, H D and Gowda, C L L and Reddy, V G and Dwivedi, S L (2008) Sweet sorghum a promising bioenergy crop-phenotyping reference set for sugar content. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Upadhyaya, H D and Dwivedi, S L and Varshney, R K and Hoisington, D A and Gowda, C L L (2008) Using genetic and genomic resources to broaden the genetic base of cultivated groundnut. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Irshad Ahmed, M and Singh, Sube (2007) Agroecological patterns of diversity in pearl millet [Pennisetum glaucum (L.) R. Br.] germplasm from India. Journal of Plant Genetic Resources, 20 (3). pp. 178-185.
Hash, C T and Hoisington, D A and Varshney, R K and et al, . (2007) Applications of molecular markers in breeding. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India. (Unpublished)
Redden, R J and Furman, B J and Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Coyne, C J and Enneking, D (2007) Biodiversity Management in Chickpea. In: Chickpea Breeding and Management. CAB International Publishing, Wallingford Oxfordshire, UK, pp. 355-358. ISBN 978-1-84593-213-8
Jayashree, B and Chandra, S and Hoisington, D A and Upadhyaya, H D and Hash, C T and Vadez, V and Varshney, R K and Senthilvel, S (2007) Bioinformatics platform for ICRISAT's global research needs. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India. (Unpublished)
Vadez, V and Krishnamurthy, L and Hash, C T and et al, . (2007) Breeding for salt tolerance in cereal and legumes: Status and prospects. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh India. (Unpublished)
Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.
Upadhyaya, H D and Gowda, C L L and Kashiwagi, J and et al, . (2007) Core and Mini Core Approaches for Enhancing Use of Germplasm in Crop Improvement. Documentation. International Crops Research Institute for Semi-Arid Tropic, Patancheru, Andha Pradesh, India.
Upadhyaya, H D and Gowda, C L L and Mgonja, M A and Haussmann, B I G (2007) Current Status of Genetic Resources Conservation, Characterization and Utilization. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India. (Unpublished)
Varshney, R K and Nayak, S N and Jayashree, B and Eshwar, K and Upadhyaya, H D and Hoisington, D A (2007) Development of cost-effective SNP assays for chickpea genome analysis and breeding. Journal of SAT Agricultural Research, 3 (1). pp. 1-3. ISSN 0973-3094
Hash, C T and etal, . (2007) Diversity analysis of 3365 sorghums in the GCP composite germplasm set based on allelic variation at 41 SSR loci. In: Generation Challenge Programme: Annual Research Meeting, 12–16 Sep 2007, Benoni, South Africa.
Khairwal, I S and Yadav, S K and Rai, K N and Upadhyaya, H D and Kachhawa, D and Nirwan, B and Bhattacharjee, R and Rajpurohit, B S and Dangaria, C J and Srikant, - (2007) Evaluation and identification of promising pearl millet germplasm for grain and fodder traits. Journal of SAT Agricultural Research, 5 (1). pp. 1-6. ISSN 0973-3094
Mallikarjuna, N and Sharma, H C and Upadhyaya, H D (2007) Exploitation of wild relatives of pigeonpea and chickpea for resistance to Helicoverpa armigera. Jounal of SAT Agricultural Research , 3 (1). p. 4. ISSN 0973-3094
Alexander, G and Ravi, D and Ramakrishna Reddy, Ch and Saxena, K B and Hanson, J and Upadhyaya, H D and Blummel, M (2007) Forage yield and quality in pigeonpea germplasm lines. Journal of SAT Agricultural Research, 3 (1). pp. 1-3. ISSN 0973-3094
Upadhyaya, H D (2007) Genetic Resources Diversity of Finger Millet – a Global Perspective. In: Finger millet Blast Management in East Africa. Creating opportunities for improving production and utilization of finger millet Proceedings Of the First International Finger millet Stakeholders Workshop, 13-14 September 2005, Nairobi, Kenya.
Rai, K N and Bhattacharjee, R and Thakur, R P and et al, . (2007) Genetic and Cytoplasmic Diversification of Pearl Millet Hybrid Parents. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India. (Unpublished)
Upadhyaya, H D and Dwivedi, S L and Gowda, C L L and Singh, S (2007) Identification of diverse germplasm lines for agronomic traits in a chickpea (Cicer arietinum L.) core collection for use in crop improvement. Field Crops Research, 100 (2-3). pp. 320-326. ISSN 03784290
Kashiwagi, J and Upadhyaya, H D and Krishnamurthy, L and Singh, Sube (2007) Identification of high-yielding large-seeded kabuli chickpeas with drought avoidance root traits. Journal of SAT Agricultural Research, 3 (1). pp. 1-2. ISSN 0973-3094
Upadhyaya, H D and Reddy, K N and Sastry, D V S S R and Gowda, C L L (2007) Identification of photoperiod insensitive sources in the world collection of pigeonpea at ICRISAT. Journal of SAT Agricultural Research, 3 (1). pp. 1-4. ISSN 0973-3094
Gowda, C L L and Upadhyaya, H D and Ghaffar, M A (2007) Importance of under-utilized indigenous legumes in Asia-pacific region. In: Proceedings of the Ist international conference on indigenous vegetables and legumes prospectus for fighting poverty, hunger and malnutrition, 12-15 December 2006, Hyderabad, Andhra Pradesh, India.
Upadhyaya, H D and Gowda, C L L and Reddy, K N (2007) Indigenous food legumes of Asia: germplasm conservation, diversity and utilization in crop improvement. In: Proceedings of the Ist international conference on indigenous vegetables and legumes prospectus for fighting poverty, hunger and malnutrition, 12-15 December 2006, Hyderabad, Andhra Pradesh, India.
Aruna, R and Rao, D M and Reddy, L J and Ramakrishnan, S S and Upadhyaya, H D (2007) Influence of pod maturity and level of domestication on biochemical components in wild and cultivated pigeonpea (Cajanus cajan). Annals of Applied Biology, 151 (1). pp. 25-32.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2007) Influence of seed size in chickpea on moisture content during seed drying. Journal of SAT Agricultural Research, 3 (1). pp. 5-7. ISSN 0973-3094
Waliyar, F and Kumar, P L and Nigam, S N and et al, . (2007) Integrated Management of Aflatoxin Contamination: Progress towards Enhancing Food and Feed Quality and Human and Animal Health. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India. (Unpublished)
Vadez, V and Krishnamurthy, L and Nigam, S N and Upadhyaya, H D and Hoisington, D A and Aruna, R and Leal-Bertioli, S and Bertioli, D (2007) Large variation in gravimetric TE exists in wild and cultivated groundnut germplasm. In: Generation Challenge Programme: Annual Research Meeting, 12–16 Sep 2007, Benoni, South Africa.
Vadez, V and Krishnamurthy, L and Serraj, R and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K and Turner, N C and Siddique, K H M (2007) Large variation in salinity tolerance in chickpea is explained by differences in sensitivity at the reproductive stage. Field Crops Research, 104 (1-3). pp. 123-129. ISSN 0378-4290
Nayyar, H and Kaur, G and Kumar, S and Upadhyaya, H D (2007) Low Temperature Effects during Seed Filling on Chickpea Genotypes (Cicer arietinum L.): Probing Mechanisms affecting Seed Reserves and Yield. Journal Of Agronomy And Crop Science, 193 (5). pp. 336-344. ISSN 0931-2250
Upadhyaya, H D and Reddy, V G and Gowda, C L L and Singh, Sube (2007) A Minicore Collection of Sorghum [Sorghum bicolor (L.) Moench] for Enhancing Utilization of Germplasm in Crop Improvement. In: The ASA-CSSA-SSSA International Annual Meetings, November 4-8, 2007, New Orleans, Louisiana.
Upadhyaya, H D and etal, . (2007) Mining allelic diversity associated with drought and salinity tolerance in the reference subset of chickpea germplasm collections. In: Generation Challenge Programme Annual Research Meeting, 12–16 September 2007, Benoni, South Africa.
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Vadez, V and Hash, C T and Bidinger, F R and et al, . (2007) Molecular breeding for drought tolerance: Progresses, issues, orientations. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India. (Unpublished)
Reddy, V G and Upadhyaya, H D and Gowda, C L L (2007) Morphological characterization of world's proso millet germplasm collection. Journal of SAT Agricultural Research, 3. 4pp.. ISSN 0973-3094
Upadhyaya, H D and Gowda, C L L and Reddy, V G (2007) Morphological diversity in finger millet germplasm introduced from Southern and Eastern Africa. Journal of SAT Agricultural Research, 3 (1). pp. 1-3.
Upadhyaya, H D and Salimath, P M and Gowda, C L L and Singh, Sube (2007) New early-maturing germplasm lines for utilization in chickpea improvement. Euphytica, 157 (1-2). pp. 195-208.
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Silim, S N (2007) Patterns of diversity in pigeonpea (Cajanus cajan (L.) Millsp.) germplasm collected from different elevations in Kenya. Genetic Resources and Crop Evolution, 54 (8). pp. 1787-1795.
Dwivedi, S L and Bertioli, D J and Crouch, J H and Valls, J F and Upadhyaya, H D and Favero, A and Moretzsohn, M and Paterson, A H (2007) Peanut.Chapter 3. In: Genome Mapping and Molecular Breeding in Plants. Springer-Verlag, New York, pp. 115-151. ISBN 978-3-540-34387-5
Upadhyaya, H D and Reddy, K N and Gowda, C L L (2007) Pearl millet germplasm at ICRISAT genebank - status and impact. Journal of SAT Agricultural Research, 3. 5pp.. ISSN 0973-3094
Upadhyaya, H D and Reddy, K N and Gowda, C L L and Singh, Sube (2007) Phenotypic diversity in the pigeonpea (Cajanus cajan) core collection. Genetic Resources and Crop Evolution, 54 (6). pp. 1167-1184.
Mace, E S and Yuejin, W and Boshou, L and Upadhyaya, H D and Chandra, S and Crouch, J H (2007) Simple sequence repeat (SSR)-based diversity analysis of groundnut (Arachis hypogaea L.) germplasm resistant to bacterial wilt. Plant Genetic Resources: Characterization and Utilization, 5 (1). pp. 27-36.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2007) Survival of groundnut seeds under different storage conditions. Journal of SAT Agricultural Research, 5. 3pp. ISSN 0973-3094
Mallikarjuna, N and Sharma, H C and Waliyar, F and et al, . (2007) Tapping Genetic Diversity in ICRISAT Mandate Legumes through Wide Hybridization: Progress and Prospects. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India. (Unpublished)
Upadhyaya, H D and Gowda, C L L and Pundir, R P S and Ntare, B R (2007) Use of core and mini core collections in preservation and utilization of genetic resources in crop improvement. In: Plant genetic resources and food security in West and Central Africa. Regional Conference, 26-30 April 2004, Ibadan, Nigeria.
Upadhyaya, H D and Gowda, C L L (2007) Use of core collection approach to enhance germplasm utilization in chickpea and pigeonpea. In: Proceedings of the Fourth International Food Legumes Research Conference, 18-22 Oct 2005, New Delhi, India.
Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Aruna, R and Nigam, S N and Waliyar, F and Upadhyaya, H D and Reddy, S V and Reddy, K and Reddy, A G S (2006) Aflatoxin resistance breeding at ICRISAT Center. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Swamy, B P M and Upadhyaya, H D and Goudar, P V K (2006) Characterization of Asian core-collection of groundnut for morphological traits. Indian Journal of Crop Science, 1 (1-2). pp. 129-134. ISSN 0973-4880
Reddy, V G and Upadhyaya, H D and Gowda, C L L (2006) Characterization of world's Foxtail Millet germplasm collections for morphological traits. International Sorghum and Millets Newsletter, 47. pp. 107-109.
Reddy, V G and Upadhyaya, H D and Gowda, C L L (2006) Current status of Sorghum genetic resources at ICRISAT: their sharing and impacts. International Sorghum and Millets Newsletter, 47. pp. 9-13.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2006) Degluming, storage and testing periods influence seed germination of wild Sorghum germplasm. International Sorghum and Millets Newsletter, 47. pp. 5-8.
Upadhyaya, H D and Furman, B J and Dwivedi, S L and Upuda, S M and Gowda, C L L and Baum, M and Crouch, J H and Buhariwalla, H K and Singh, Sube (2006) Development of a composite collection for mining germplasm possessing allelic variation for beneficial traits in chickpea. Plant Genetic Resources, 4 (1). pp. 13-19. ISSN 1479-2621
Upadhyaya, H D and Reddy, L J and Gowda, C L L and Reddy, K N and Singh, Sube (2006) Development of a mini core subset for enhanced and diversified utilization of pigeonpea germplasm resources. Crop Science, 46 (5). pp. 2127-2132.
Upadhyaya, H D and Varshney, R K and Hash, C T and Hoisington, D A and Gowda, C L L and Reddy, V G and Chandra, S and Lalitha, N and Bharathi, A (2006) Development of composite collection and genotyping of foxtail millet [Setaria italic (L.) Beauv.] composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Upadhyaya, H D and Hash, C T and et al, . (2006) Development of composite collection and genotyping of pearl millet [Pennisetum glaucum (L.) R. Br.]. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Upadhyaya, H D and Gowda, C L L and Pundir, R P S and Reddy, V G and Singh, Sube (2006) Development of core subset of finger millet germplasm using geographical origin and data on 14 quantitative traits. Genetic Resources and Crop Evolution, 53 (4). pp. 679-685.
Nayyar, H and Singh, S and Kaur, S and Kumar, S and Upadhyaya, H D (2006) Differential Sensitivity of Macrocarpa and Microcarpa Types of Chickpea (Cicer arietinum L.) to Water Stress: Association of Contrasting Stress Response with Oxidative Injury. Journal of Integrative Plant Biology, 48 (11). pp. 1318-1329. ISSN 1744-7909
Nayyar, H and Kaur, S and Singh, Smita and Upadhyaya, H D (2006) Differential sensitivity of Desi (small-seeded) and Kabuli (large-seeded) chickpea genotypes to water stress during seed filling: effects on accumulation of seed reserves and yield. Journal of the Science of Food and Agriculture, 86 (13). pp. 2076-2082. ISSN 0022-5142
Upadhyaya, H D and Gowda, C L L and Buhariwalla, H K and Crouch, J H (2006) Efficient use of crop germplasm resources: identifying useful germplasm for crop improvement through core and mini-core collections and molecular marker approaches. Plant Genetic Resources, 4 (1). pp. 25-35. ISSN 1479-2621
Upadhyaya, H D and Gowda, C L L (2006) Enhancing Utilization of Plant Genetic Resources in Crop Improvement. In: Plant Breeding in Post Genomics Era Proceedings of the Second National Plant Breeding Congress, 1-3 March 2006, Coimbatore, India.
Waliyar, F and et al, . (2006) Evaluation of new Aspergillus flavus resistant groundnut varieties for agronomic performance in multi-location on-farm trials in Andhra Pradesh, India. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Reddy, K N and Upadhyaya, H D and Reddy, L J and Gowda, C L L (2006) Evaluation of pollination control methods for pigeonpea (Cajanus cajan (L.) Millsp.) germplasm regeneration. International Chickpea and Pigeonpea Newsletter, 13. pp. 35-38. ISSN 1023-4861
Gaur, P M and Pande, S and Upadhyaya, H D and Rao, B V (2006) Extra-Large Kabuli Chickpea with High Resistance to Fusarium Wilt. Journal of SAT Agricultural Research, 2 (1). pp. 1-2.
Vadez, V and Krishnamurthy, L and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K (2006) Genetic variability for salinity tolerance in chickpea. In: 3rd International Conference on Legume Genomics and Genetics, 9 - 13, April, 2006.
Hoisington, D A and Upadhyaya, H D and Dwivedi, S L and Baum, M and Udupa, S M and Furman, B J and Chandra, S and Eshwar, K and Gowda, C L L and Singh, S and Prasanth, V P (2006) Genotypic and Phenotypic Variation in the Global Collection of Chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Upadhyaya, H D and Varshney, R K and Hoisington, D A and et al, . (2006) Genotyping composite collection of finger millet [Eleusine coracana (L.) Gaertn]. In: Generation Challenge Program Annual Research Meeting, 12-16 September 2006, Sao Paulo, Brazil.
Sastry, D V S S R and Reddy, K N and Upadhyaya, H D and Gowda, C L L (2006) ICP 13828 - A Pigeonpea Germplasm Accession with 10-seeded Pods. Journal of SAT Agricultural Research, 2 (1). 1pp. ISSN 0973-3094
Upadhyaya, H D and Coyne, C J and Singh, Sube and Gowda, C L L and Lalitha, N and Muehlbauer, F J (2006) Identification of Large-Seeded High-Yielding Diverse Kabuli Accessions in Newly Assembled Chickpea Germplasm. Journal of SAT Agricultural Research, 2 (1). pp. 1-4.
Upadhyaya, H D and Reddy, L J and Gowda, C L L and Singh, Sube (2006) Identification of diverse groundnut germplasm: sources of early maturity in a core collection. Field Crops Research, 97 (2-3). pp. 261-271.
Pande, S and Kishore, G K and Upadhyaya, H D and Rao, J N (2006) Identification of sources of multiple disease resistance in mini-core collection of chickpea. Plant Disease, 90 (9). pp. 1214-1218.
Upadhyaya, H D (2006) Improving pigeonpea with the wild. SATrends ICRISAT's Monthly Newsletter, 62. p. 1.
Gowda, C L L and Upadhyaya, H D (2006) International Crop Germplasm Exchange at ICRISAT. Indian Journal of Plant Genetic Resources, 19 (3). pp. 418-427.
Upadhyaya, H D and Reddy, L J and Gowda, C L L and Reddy, K N and Singh, S (2006) A Mini Core Collection of Pigeonpea: An Effecient and Inexpensive Approach to Improve a Multipurpose Crop. CSA News, 51 (10). p. 4. ISSN 0318-6849
Upadhyaya, H D and Baum, M and Buhariwala, H K and Udupa, S M and Furman, B J and Dwivedi, S L and Hoisington, D A and Gaur, P M and Chandra, S and Gowda, C L L and Valkoun, J (2006) Mining the chickpea composite collection for allelic variation. In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Upadhyaya, H D and Valls, J F M and Bertolli, D and et al, . (2006) Molecular characterization of groundnut (Arachis hypogaea L.) composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Upadhyaya, H D and Bhattacharjee, R and Hoisington, D A and Chandra, S and Varshney, R K and Reddy, K N and Saxena, K B (2006) Molecular characterization of pigeonpea [Cajanus cajan (L.) Millspaugh] composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Gaur, P M and Saxena, K B and Nigam, S N and Reddy, B V S and Rai, K N and Gowda, C L L and Upadhyaya, H D (2006) Plant Breeding Research at ICRISAT. In: Principles of Plant Genetics and Breeding. Wiley-Blackwell, pp. 455-458. ISBN 978-1-4051-3646-4
Upadhyaya, H D and Pundir, R P S and Singh, S and Gowda, C L L (2006) Procedures and protocols to maintain purity and viability of peanut (groundnut) germplasm. In: Improving yield and economic viability of peanut production in Papua New Guinea and Australia: proceedings of a workshop, 18–19 October 2005, Lae, Papua New Guinea.
Reddy, B V S and Ramesh, S and Longvah, T and Elongvan, M and Upadhyaya, H D (2006) Prospects of breeding micronutrients-dense sorghums. In: International Plant Breeding Symposium, 20-25 Aug 2006, Mexico.
Kashiwagi, J and Krishnamurthy, L and Singh, Sube and Gaur, P M and Upadhyaya, H D and Panwar, J D S and Basu, P S and Ito, O and Tobita, S (2006) Relationships between Transpiration Efficiency and Carbon Isotope Discrimination in Chickpea (C. arietinum L). Journal of SAT Agricultural Research, 2 (1). pp. 1-3. ISSN 0973-3094
Mace, E S and Phong, D T and Upadhyaya, H D and Chandra, S and Crouch, J H (2006) SSR analysis of cultivated groundnut (Arachis hypogaea L.) germplasm resistant to rust and late leaf spot diseases. Euphytica, 152 (3). pp. 317-330.
Jiang, H and et al, . (2006) SSR and AFLP markers for resistance to bacterial wilt in groundnut (Arachis hypogaea L.). In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Srivastava, N and Vadez, V and Upadhyaya, H D and Saxena, K B (2006) Screening for intra and inter specific variability for salinity tolerance in Pigeonpea (Cajanus cajan) and its related wild species. Journal of SAT Agricultural Research, 2 (1). pp. 1-12.
Sastry, D V S S R and Upadhyaya, H D and Gowda, C L L (2006) Seed Quality of Genetic resources at ICRISAT. In: XII National Seed Seminar on Prosperity Through Quality Seed, 24-26 February 2006, Hyderabad, Andhra Pradesh.
Upadhyaya, H D and Kumar, S and Gowda, C L L and Singh, Sube (2006) Two major genes for seed size in chickpea (Cicer arietinum L.). Euphytica, 147 (3). pp. 311-315.
Dwivedi, S L and Upadhyaya, H D and Balaji, J and Buhariwalla, H K and Blair, M W and Ortiz, R and Crouch, J H and Serraj, R (2006) Using Genomics to Exploit Grain Legume Biodiversity in Crop Improvement. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 171-358. ISBN 978-0-471-73215-0
Kashiwagi, J and Krishnamurthy, L and Singh, S and Upadhyaya, H D (2006) Variation of SPAD Chlorophyll Meter Readings (SCMR) in the Mini-Core Germplasm Collection of Chickpea. Journal of SAT Agricultural Research, 2 (1). pp. 1-3.
Dwivedi, S L and Upadhyaya, H D and Hegde, D M (2005) Development of Core Collection using Geographic Information and Morphological Descriptors in Safflower (Carthamus tinctorius L.) Germplasm. Genetic Resources and Crop Evolution, 52 (7). pp. 821-830. ISSN 0925-9864
Reddy, L J and Upadhyaya, H D and Gowda, C L L and Singh, Sube (2005) Development of core collection in pigeonpea [Cajanus cajan (L.) Millspaugh] using geographic and qualitative morphological descriptors. Genetic Resources and Crop Evolution, 52 (8). pp. 1049-1056.
Upadhyaya, H D and Nigam, S N and Reddy, A G S and Yellaiah, N (2005) Early-maturing, large-seeded and high-yielding groundnut varieties ICGV 96466, ICGV 96468 and ICGV 96469. Journal of SAT Agricultural Research, 1 (1). pp. 1-4. ISSN 0973-3094
Blummel, M and Ramakrishna Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D (2005) Food-Fodder Traits in Groundnut. International Arachis Newsletter, 25. pp. 52-54.
Blummel, M and Ramakrishna Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D (2005) Food-fodder traits in groundnut. Journal of SAT Agricultural Research, 1 (1). pp. 1-3. ISSN 0973-3094
Gowda, C L L and Ramesh, S and Chandra, S and Upadhyaya, H D (2005) Genetic basis of pod borer (Helicoverpa armigera) resistance and grain yield in desi and kabuli chickpea (Cicer arietinum L.) under unprotected conditions. Euphytica, 145 (1-2). pp. 199-214.
Kashiwagi, J and Krishnamurthy, L and Upadhyaya, H D and Krishna, H and Chndra, S and Vadez, V and Serraj, R (2005) Genetic variability of drought-avoidance root traits in the mini-core germplasm collection of chickpea (Cicer arietinum L.). Euphytica, 146 (3). pp. 213-222. ISSN 1573-5060
Upadhyaya, H D and Pundir, R P S and Hash, C T and Hoisington, D A and Chandra, S and Gowda, C L L and Singh, Sube and Reddy, V G (2005) Genotyping Finger Millet Germplasm –Developing a Composite Collection. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Upadhyaya, H D and Bhattacharjee, R and Bertioli, D and et al, . (2005) Genotyping Groundnut (Arachis hypogaea) Composite Collection Using SSR Markers. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Upadhyaya, H D (2005) Genotyping pigeonpea composite collection using SSR markers. In: Generation Challenge Program meeting, 29 September-1 October 2005, Rome, Italy.
Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Reddy, K N and Singh, Sube (2005) Geographical patterns of diversity for qualitative and quantitative traits in the pigeonpea germplasm collection. Plant Genetic Resources, 3 (3). pp. 331-352.
Upadhyaya, H D and Hildebrand, G L and Nigam, S N and Yellaiah, N (2005) Groundnut Cultivar Nyanda (ICGV 93437) Released in Zimbabwe. International Arachis Newsletter (25). pp. 22-24. ISSN 1010-5824
Upadhyaya, H D and Swamy, B P M and Goudar, P V K and Kullaiswamy, B Y and Singh, Sube (2005) Identification of diverse groundnut germplasm through multienvironment evaluation of a core collection for Asia. Field Crops Research, 93 (2-3). pp. 293-299. ISSN 0378-4290
Aruna, R and Rao, D M and Reddy, L J and Upadhyaya, H D and Sharma, H C (2005) Inheritance of trichomes and resistance to pod borer (Helicoverpa armigera) and their association in interspecific crosses between cultivated pigeonpea (Cajanus cajan) and its wild relative C. scarabaeoides. Euphytica, 145 (3). pp. 247-257. ISSN 1573-5060
Waliyar, F and et al, . (2005) Management of Aflatoxins in groundnut in Southern India. In: Summary proceedings of the International peanut conference 2005 “Prospects and emerging opportunities for peanut quality and utilization technology”, 9-12 Jan 2005, Bangkok, Thailand..
Upadhyaya, H D and Baum, M and Dwivedi, S L and et al, . (2005) Mining allelic variation associated with beneficial traits in composite collection of chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Blummel, M and Vellaikumar, S and Devulapalli, R and Nigam, S N and Upadhyaya, H D and Khan, A (2005) Preliminary Observations on Livestock Productivity in sheep Fed Exclusively on Haulms from eleven Cultivars of Groundnut. International Arachis Newsletter, 25. pp. 54-57.
Pande, S and Upadhyaya, H D and Rao, J N and Reddy, P L and Rao, P P (2005) Promotion of Integrated Disease Management of ICGV 91114, a dual-purpose, early maturing groundnut variety for rainfed areas. Information Bulletin No.68. Technical Report. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Girish, A G and Sastry, D V S S R and Thakur, R P and Upadhyaya, H D (2005) Seed health testing for long-term conservation and international exchange of crop germplasm. In: Plant Health Global Wealth, Global Conference II, 25-29 Nov 2005 , Udaipur, Rajasthan, India.
Gowda, C L L and Upadhyaya, H D (2005) Strategy for conservation and enhanced use of crop genetic resources. In: Proceedings of 13th International Genetic Resources Workshop on Rice Genome and Plant Genetic Resources, 22-23 August 2005, Tsukuba, Japan.
Van Der Maesen, L J G and Pundir, R P S and Upadhyaya, H D (2005) Use made of wild legume relatives in breeding. In: Proceedings of the Fourth International Food Legumes Research Conference, 18-22 Oct 2005, New Delhi, India.
Upadhyaya, H D (2005) Variability for drought resistance related traits in the mini core collection of peanut. Crop Science, 45 (4). pp. 1432-1440.
Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Upadhyaya, H D (2004) Core collection for efficient management and enhanced utilization of plant genetic resources. In: Plant Genetic Resource Management. Plant Genetic Resources Series . Narosa Publishing House, New Delhi, India, pp. 280-296. ISBN 817319579X, 9788173195792
Vellaikumar, S and Waliyar, F and Nigam, S N and Upadhyaya, H D and Khan, A and Blummel, M (2004) Effects of cultivars-dependent groundnut haulms quality on live weight, gains and nitrogen retention in sheep. In: New Dimensions of Animal Feeding to Sustain Development and Competitiveness Proceedings of Vth ANA Biennial Conference held at National Institute of Animal Nutrition & Physiology, 2004, Bangalore.
Sardana, S and Upadhyaya, H D and Dhillon, B S (2004) Genetic resources of pulse crops - present status and future plans. In: Pulses in new perspective: proceedings of the National Symposium on Crop Diversification and Natural Resource Management, 20-22 December 2003, Indian Institute of Pulse Research, Kanpur, India.
Halewood , M and Gaiji, S and Upadhyaya, H D (2004) Germplasm flows in and out of Kenya and Uganda through the CGIAR: A case study of pattern of exchange and use to consider in developing national policies. In: Meeting in Belliago, 5–6 October 2004, Italy.
Ravinder Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D and Blummel, M (2004) Observations on food and fodder traits in a wide range of cultivars of groundnut. In: New Dimensions of Animal Feeding to Sustain Development and Competitiveness Proceedings of Vth ANA Biennial Conference held at National Institute of Animal Nutrition & Physiology, 2004, Bangalore.
Serraj, R and Krishnamurthy, L and Upadhyaya, H D (2004) Screening Chickpea Mini-core Germplasm for Tolerence to Soil Salinity. International Chickpea and Pigeonpea Newsletter, 11. pp. 29-32.
Girish, A G and Shaik, B S and Sastry, D V S S R and Upadhyaya, H D (2004) Seed health test of minor millets germplasm from medium term storage in the gene bank at ICRISAT. In: National seminar on Biotechnological approaches towards the integrated magagement of crop diseases, 30 -31st July 2004, Aurangabad, Maharstra, India.
Gopal, K and Jagadeswar, R and Prasad Babu, G and Upadhyaya, H D (2004) Sources of resistance to bud necrosis disease in groundnut. International Arachis Newsletter, 24. pp. 36-38. ISSN 1010-5824
Dwivedi, S L and Gurtu, S and Chndra, S and Upadhyaya, H D and Nigam, S N (2003) AFLP diversity among selected rosette resistant groundnut germplasm. International Arachis Newsletter (23). pp. 21-23. ISSN 1010-5824
Upadhyaya, H D and Nigam, S N and Waliyar, F (2003) Aflatoxin Contamination of Groundnut: Conventional Breeding for Resistance. In: Proceedings of the 3rd Fungal Genomics, 4th Fumonisin, and 16th Aflatoxin Elimination Workshops October, 13 - 15 Oct 2003, Savannah, Georgia.
Upadhyaya, H D and Ortiz, R and Bramel, P J and Singh, Sube (2003) Development of a groundnut core collection using taxonomical, geographical and morphological descriptors. Genetic Resources and Crop Evolution, 50 (2). pp. 139-148.
Krishnamurthy, L and Kashiwagi, J and Upadhyaya, H D and Serraj, R (2003) Genetic diversity of drought-avoidance root traits in the mini-core germplasm collection of chickpea. International Chickpea and Pigeonpea Newsletter (10). pp. 21-24. ISSN 1023-4861
Upadhyaya, H D (2003) Geographical patterns of variation for morphological and agronomic characteristics in the chickpea germplasm collection. Euphytica, 132 (3). pp. 343-352.
Sastry, D V S S R and Rao, N K and Upadhyaya, H D (2003) Groundnut germplasm seed viability after ten years of storage as base collection. International Arachis Newsletter (23). pp. 7-9. ISSN 1010-5824
Thakur, R P and Rao, V P and Upadhyaya, H D and Nigam, S N and Talwar, H S (2003) Improved Screening Techniques for In-vitro Seed Colonization and Pre-harvest Seed Infection by Aspergillus flavus In Groundnut. Indian Journal of Plant Protection, 31 (2). pp. 54-60. ISSN 0253-4355
Upadhyaya, H D (2003) Phenotypic diversity in groundnut (Arachis hypogaea L.) core collection assessed by morphological and agronomical evaluations. Genetic Resources and Crop Evolution, 50 (5). pp. 539-550.
Swamy, B P M and Upadhyaya, H D and Goudar, P V K and Kullaiswamy, B Y and Singh, S (2003) Phenotypic variation for agronomic characteristics in a groundnut core collection for Asia. Field Crops Research, 84 (3). pp. 359-371.
Upadhyaya, H D and Waliyar, F and Nigam, S N (2002) Breeding for Resistance to aflatoxin Contamination in Groundnut. Aflatoxin. pp. 1-6.
Upadhyaya, H D and Bramel, P J and Ortiz, R and Singh, S (2002) Developing a mini core of peanut for utilization of genetic resources. Crop Science, 42 (6). pp. 2150-2156.
Upadhyaya, H D and Nigam, S N and Thakur, R P (2002) Genetic Enhancement for Resistance to Aflatoxin Contamination in Groundnut. In: Summary proceedings of the Seventh ICRISAT Regional Groundnut Meeting for Western and Central Africa, 6-8 Dec. 2000 , Cotonu, Benin.
Upadhyaya, H D and Bramel, P J and Ortiz, R and Singh, S (2002) Geographical patterns of diversity for morphological and agronomic traits in the groundnut germplasm collection. Euphytica, 128 (2). pp. 191-204.
Upadhyaya, H D (2002) A Mini Core Collection of Groundnut as a Means to Enhance Utilization of Genetic Resources in Crop Improvement. Web Article.
Upadhyaya, H D and Ortiz, R and Bramel, P J and Singh, S (2002) Phenotypic diversity for morphological and agronomic characteristics in chickpea core collection. Euphytica, 123 (3). pp. 333-342. ISSN 1573-5060
Upadhyaya, H D and Nigam, S N and Reddy, A G S and Yellaiah, N (2002) Registration of Early-Maturing Peanut Germplasm ICGV 93382. Crop Science, 42 (6). p. 2221. ISSN 1435-0653
Upadhyaya, H D and Nigam, S N and Reddy, A G S and Yellaiah, N (2002) Registration of Early-Maturing, Rust, Late Leaf Spot, and Low Temperature Tolerant Peanut Germplasm Line ICGV 92267. Crop Science, 42 (6). p. 2221.
Upadhyaya, H D and Ortiz, R and Bramel, P J and Singh, S (2001) Development in groundnut core collection from Asian region. In: Diamond Jubilee Symposium: Hundred Years of Post-Mendelian Genetics and Plant Breeding- Retrospect and Prospects, 6-9 November 2001, Indian Society of Genetics and Plant Breeding, New Delhi.
Upadhyaya, H D and Bramel, P J and Singh, S (2001) Development of a chickpea core subset using geographic distribution and quantitative traits. Crop Science, 41 (1). pp. 206-210.
Upadhyaya, H D and Nigam, S N and Singh, S (2001) Evaluation of groundnut core collection to identify sources of tolerance to low temperature at germination. Indian Journal of Plant Genetic Resources, 14 (2). pp. 165-167.
Pande, S and Rao, J N and Upadhyaya, H D and Lenne, J M (2001) Farmers' participatory integrated management of foliar diseases of groundnut. International Journal of Pest Management, 47 (2). pp. 121-126. ISSN 0967-0874
Nigam, S N and Upadhyaya, H D and Chandra, S and Rao, R C N and Wright, G C and Reddy, A G S (2001) Gene effects for specific leaf area and harvest index in three crosses of groundnut (Arachis hypogaea). Annals of Applied Biology, 139 (3). pp. 301-306. ISSN 1744-7348
Upadhyaya, H D and Nigam, S N and Thakur, R P (2001) Host plant resistance for reducing Aflatoxin contamination in groundnut. In: Poster Abstracts of the Diamond Jubilee Symposium on 100 years of Post-Mendelian Genetics and Plant Breeding – Retrospect and Prospects , 6-9 Nov 2001, New Delhi, India.
Upadhyaya, H D and Nigam, S N and Singh, Sube (2001) Identification of new sources of early-maturity in groundnut core collection. In: Diamond Jubilee Symposium Hundred Years of Post-Mendelian Genetics and Plant Breeding- Retrospect and Prospects, 6-9 November 2001, Indian Society of Genetics and Plant Breeding, New Delhi.
Dar, W D and Kumar, J and Saxena, K B and Upadhyaya, H D and Crouch, J H (2001) International Efforts on Improvement of Chickpea and Pigeonpea. In: proceedings of National Symposium on Pulses for Sustainable Agriculture and Nutritional Security, 17-19 April, 2001, New Delhi, India.
Upadhyaya, H D (2001) New Sources of Early-Maturity Identified in Groundnut Core Collection. Grain Legumes. pp. 1-3.
Upadhyaya, H D and Nigam, S N and Mehan, V K and Reddy, A G S and Yellaiah, N (2001) Registration of Aspergillus flavus Seed Infection Resistant Peanut Germplasm ICGV 91278, ICGV 91283, and ICGV 91284. Crop Science, 41 (2). pp. 599-600.
Upadhyaya, H D and Nigam, S N and Reddy, A G S and Yellaiah, N (2001) Registration of Early-Maturing Fresh Seed Dormant Peanut Germplasm ICGV 93470. Crop Science, 41 (2). pp. 597-598.
Upadhyaya, H D and Nigam, S N and Pande, S and Reddy, A G S and Yellaiah, N (2001) Registration of Early-Maturing, Moderately Resistant to Rust Peanut Germplasm ICGV 94361. Crop Science, 41 (2). pp. 598-599.
Upadhyaya, H D and Ferguson, M E and Bramel, P J (2001) Status of the Arachis Germplasm Collection at ICRISAT. Peanut science, 28 (2). pp. 89-96. ISSN 0095-3679
Upadhyaya, H D and Nigam, S N (2001) Strategy for breeding for early-maturity in groundnut. In: Abstracts-New Millenium International Groundnut Workshop, 4-7 Sep 2001, SPRI, Qingdao, China..
Upadhyaya, H D and Ortiz, R (2001) A mini core subset for capturing diversity and promoting utilization of chickpea genetic resources in crop improvement. Theoretical and Applied Genetics, 102 (8). pp. 1292-1298.
Upadhyaya, H D (2000) Core Collection of Chickpea as a Means to Enhance Utilization of Genetic Resources in Crop Improvement. Grain Legumes. pp. 1-2.
Upadhyaya, H D and Nigam, S N (1999) Detection of Epistasis for Protein and Oil Contents and Oil Quality Parameters in Peanut. Crop Science, 39 (1). pp. 115-118.
Gadag, R N and Upadhyaya, H D and Gaud, G V (1999) Genetic analysis of yield, protein, oil and other related traits in soybean. Indian Journal of Genetics and Plant Breeding, 59 (4). pp. 487-492. ISSN 0019-5200
Upadhyaya, H D and Nigam, S N (1999) Inheritance of Fresh Seed Dormancy in Peanut. Crop Science, 39 (1). pp. 98-101.
Upadhyaya, H D and Nigam, S N (1998) Epistasis for Vegetative and Reproductive Traits in Peanut. Crop Science, 38 (1). pp. 44-49.
Upadhyaya, H D and Nigam, S N and Rao, M J V and Reddy, A G S and Yellaiah, N and Reddy, N S (1998) Registration of Early-Maturing Peanut Germplasm ICGV 92196, ICGV 92206, ICGV 92234, and ICGV 92243. Crop Science, 38 (3). pp. 900-901.
Singh, R A (1998) Screening of summer groundnut genotypes against insect pests and diseases with eco-friendly agro-technology. In: International conference on pest and pesticide management for sustainable agriculture, 11-13 Dec 1998, Kanpur, India.
Upadhyaya, H D and Nigam, S N and Mehan, V K and Lenne, J M (1997) Aflatoxin Contamination of Groundnut: Prospects for a Genetic Solution through Conventional Breeding. In: Proceedings of the First Asia Working Group Meeting, 27-29 May 1996, Hanoi, Vietnam.
Upadhyaya, H D and Nigam, S N and Rao, J V and Reddy, A G S and Yellaiah, Y and Reddy, N S (1997) Registration of Five Spanish Peanut Germplasm Lines with Fresh Seed Dormancy. Crop Science, 37 (3). p. 1027.
Upadhyaya, H D and Nigam, S N and Rao, J V and Reddy, N S and Yellaiah, Y and Reddy, G S (1997) Registration of ICGV 86143 Peanut Germplasm. Crop Science, 37 (6). p. 1986.
Upadhyaya, H D and Nigam, S N (1996) Identification and inheritance of male sterility in groundnut (Arachis hypogaea L.). Euphytica, 88 (3). pp. 227-230. ISSN 1573-5060
Dharmaraj, P S and Upadhyaya, H D and Deshpande, V and Sarala, B S and Naragund, V B (1996) R-8808 - a high yielding peanut bud necrosis tolerant groundnut variety. Journal of Oilseeds Research, 13 (1). pp. 111-112. ISSN 0970-2776
Gadag, R N and Upadhyaya, H D (1995) Heterosis in soybean (Glycine max (L.) Merrill). Indian Journal of Genetics and Plant Breeding, 55 (3). pp. 308-314. ISSN 0019-5200
Upadhyaya, H D and Gopal, K (1995) Inheritance of albinism in certain crosses of groundnut (Arachis hypogaea L.). Journal of Oilseeds Research, 12 (2). pp. 167-170. ISSN 0970-2776
Rao, M J V and Upadhyaya, H D and Mehan, V K and Nigam, S N and McDonald, D and Reddy, N S (1995) Registration of Peanut Germplasm ICGV 88145 and ICGV 89104 Resistant to Seed Infection by Aspergillus flavus. Crop Science, 35 (6). p. 1717.
Nigam, S N and Rao, M J V and Upadhyaya, H D and Rao, Y L C and Reddy, N S (1995) Registration of an Early-Maturing Peanut Germplasm ICGV 86015. Crop Science, 35 (6). pp. 1718-1719. ISSN 1435-0653
Upadhyaya, H D and Nigam, S N (1994) Inheritance of two components of early maturity in groundnut (Arachis hypogaea L.). Euphytica, 78 (1-2). pp. 59-67. ISSN 1573-5060
Upadhyaya, H D and Nigam, S N and Mehan, V K and McDonald, D and Smith, D H (1993) Breeding resistant varieties: A component for Aflatoxin management in groundnut. In: Summary Proceedings of the Third ICRISAT Regional Groundnut Meeting for West Africa, 14-17 Sep 1992, Ouagadougou, Burkina Faso.
Gopal, K and Ravi, K S and Upadhyaya, H D (1993) Evaluation of Soybean Genotypes Against Major Diseases. Plant Protection Bulletin (Faridabad), 45 (4). pp. 17-18. ISSN 0378-0449
Upadhyaya, H D and Gopal, K (1993) Gamma-Ray Variability for some Quantitative Characters in Groundnut. Journal of Oilseeds Research, 10 (1). pp. 153-155. ISSN 0970-2776
Nigam, S N and Reddy, L J and Upadhyaya, H D and Dwivedi, S L (1993) Genetic enhancement in groundnut. In: National Seminar on Oilseeds Research and Development in India: Status and Strategies, 2-5 Aug, Hyderabad, Andhra Pradesh, India.
Vijayakumar, S and Gopal, K and Ravikumar, R L and Upadhyaya, H D (1993) Induced Mutation for higher yield in Groundnut(Arachis hypogae). Indian Journal of Agricultural Sciences, 63 (11). pp. 716-718. ISSN 0019-5022
Upadhyaya, H D and Nigam, S N and Rao, M J V (1992) Breeding early-maturing groundnuts at ICRISAT. In: Groundnut- A global Perspective: Proceeding of an International Workshop., 25-29 Nov 1991, ICRISAT Asia Centre, Patancheru, Andhra Pradesh.
Upadhyaya, H D and Mehan, V K and Nigam, S N and Smith, D H and McDonald, D (1992) Breeding groundnuts resistant to Aflatoxin contamination at ICRISAT. In: Groundnut- A global Perspective: Proceeding of an International Workshop., 25-29 Nov 1991, ICRISAT Asia Centre, Patancheru, Andhra Pradesh.
Upadhyaya, H D and Gopal, K and Nadaf, H L and Vijayakumar, S (1992) Combining ability studies for yield and its components in groundnut. Indian Journal of Genetics and Plant Breeding, 52 (1). pp. 1-6. ISSN 0019-5200
Gopal, K and Upadhyaya, H D and Kulkarni, M S and Jayalakshmi, A S (1992) Reaction of some Gingelly genotypes to powdery Mildew. Current Research, 21. pp. 90-91.
Gopal, K and Upadhyaya, H D (1991) Effect of Bud Necrosis disease wild of groundnut under Field Condition. Indian Phytopathology, 44. pp. 221-223. ISSN 0367-973X
Gopal, K and Reddy, K S and Upadhyaya, H D and Reddy, D R (1991) Host range of sugarcane mosaic virus (SCMV-B) from Rayalaseema. Indian Journal of Virology, 7 (1). pp. 117-119. ISSN 0970-2822
Gadag, R N and Upadhyaya, H D and Goud, J V (1990) Studies on Harvest Index in Soybean. Legume Research, 13 (4). pp. 193-196. ISSN 0976-0571
Upadhyaya, H D and Singh, B B and Chauhan, K P S (1987) Induced polygenic variability in soybean. Journal of Nuclear Agriculture and Biology, 16 (3). pp. 120-126. ISSN 0379-5489
Upadhyaya, H D (1985) Induced genetic variability for oil content in soybean. Journal of Nuclear Agriculture and Biology, 14 (3). pp. 119-120. ISSN 0379-5489
Upadhyaya, H D and Singh, B B and Chauhan, K P S (1984) Induced sterile mutants in soybeans. Current Science, 53 (8). pp. 433-435. ISSN 0011-3891
Wani, S P and Upadhyaya, H D and Dart, P J (1984) An intact plant assay for estimating nitrogenase activity (C2H2 reduction) of sorghum and millet plants grown in pots. Plant and Soil, 82 (1). pp. 15-29. ISSN 0032-079X
Upadhyaya, H D and Haware, M P and Kumar, J and Smithson, J B (1983) Resistance to wilt in chickpea. I. Inheritance of late-wilting in response to race 1. Euphytica, 32 (2). pp. 447-452. ISSN 1573-5060
Upadhyaya, H D and Smithson, J B and Haware, M P and Kumar, J (1983) Resistance to wilt in chickpea. II. Further evidence for two genes for resistance to race 1. Euphytica, 32 (3). pp. 749-755. ISSN 1573-5060
Upadhyaya, H D and Singh, B B (1979) Induced Variability in Soybean. Indian Journal of Genetics and Plant Breeding , 39 (2). pp. 207-209. ISSN 0975-6906
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Nigam, S N and Waliyar, F and Aruna, R and Reddy, S V and Kumar, P L and Craufurd, P Q and Diallo, A T and Ntare, B R and Upadhyaya, H D (2009) Breeding peanut for resistance to aflatoxin contamination at ICRISAT. Peanut Science, 36 (4). pp. 42-49. ISSN 0095-3679
Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.
Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Aruna, R and Rao, D M and Sivaramakrishnan, S and Reddy, L J and Bramel, P and Upadhyaya, H D (2009) Efficiency of three DNA markers in revealing genetic variation among wild Cajanus species. Plant Genetic Resources, 7 (2). pp. 113-121.
Pattanashetti, S K and Upadhyaya, H D and Blummel, M and Reddy, K N and Ramanareddy, Y and Kumar, V and Singh, S (2015) Genetic variability in Napier grass (Pennisetum purpureum) germplasm conserved at ICRISAT genebank. In: XXIII International Grassland Congress IGC 2015, November 20 -24, 2015, New Delhi.
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Blummel, M and Ramakrishna Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D (2005) Food-Fodder Traits in Groundnut. International Arachis Newsletter, 25. pp. 52-54.
Blummel, M and Vellaikumar, S and Devulapalli, R and Nigam, S N and Upadhyaya, H D and Khan, A (2005) Preliminary Observations on Livestock Productivity in sheep Fed Exclusively on Haulms from eleven Cultivars of Groundnut. International Arachis Newsletter, 25. pp. 54-57.
Vellaikumar, S and Waliyar, F and Nigam, S N and Upadhyaya, H D and Khan, A and Blummel, M (2004) Effects of cultivars-dependent groundnut haulms quality on live weight, gains and nitrogen retention in sheep. In: New Dimensions of Animal Feeding to Sustain Development and Competitiveness Proceedings of Vth ANA Biennial Conference held at National Institute of Animal Nutrition & Physiology, 2004, Bangalore.
Ravinder Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D and Blummel, M (2004) Observations on food and fodder traits in a wide range of cultivars of groundnut. In: New Dimensions of Animal Feeding to Sustain Development and Competitiveness Proceedings of Vth ANA Biennial Conference held at National Institute of Animal Nutrition & Physiology, 2004, Bangalore.
Roorkiwal, M and Nayak, S N and Thudi, M and Upadhyaya, H D and Brunel, D and Mournet, P and This, D and Sharma, P C and Varshney, R K (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers. Frontiers in Plant Science, 5 (248). pp. 1-11. ISSN 1664-462X
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
This, D and Courtois, B and Philippe, R and et al, . (2008) Some Data On Allele Diversity At Orthologous Candidate Genes In GCP Crops. In: Plant & Animal Genomes XVIII Conference, 9-13 January 2010, San Diego, CA.
Halewood , M and Gaiji, S and Upadhyaya, H D (2004) Germplasm flows in and out of Kenya and Uganda through the CGIAR: A case study of pattern of exchange and use to consider in developing national policies. In: Meeting in Belliago, 5–6 October 2004, Italy.
Sastry, D V S S R and Rao, N K and Upadhyaya, H D (2003) Groundnut germplasm seed viability after ten years of storage as base collection. International Arachis Newsletter (23). pp. 7-9. ISSN 1010-5824
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Sinha, P and Singh, V K and Saxena, R K and Khan, A W and Abbai, R and Chitikineni, A and Desai, A and Molla, J and Upadhyaya, H D and Kumar, A and Varshney, R K (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.). Plant Biotechnology Journal (TSI). pp. 1-9. ISSN 1467-7644
Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Vadez, V and Krishnamurthy, L and Serraj, R and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K and Turner, N C and Siddique, K H M (2007) Large variation in salinity tolerance in chickpea is explained by differences in sensitivity at the reproductive stage. Field Crops Research, 104 (1-3). pp. 123-129. ISSN 0378-4290
This, D and Courtois, B and Philippe, R and et al, . (2008) Some Data On Allele Diversity At Orthologous Candidate Genes In GCP Crops. In: Plant & Animal Genomes XVIII Conference, 9-13 January 2010, San Diego, CA.
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Meena, H P and Kumar, J and Upadhyaya, H D and Bharadwaj, C and Chauhan, S K and Verma, A K and Rizvi, A H (2010) Chickpea mini core germplasm collection as rich sources of diversity for crop improvement. Journal of SAT Agricultural Research, 8. pp. 1-5.
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Das, S and Upadhyaya, H D and Bajaj, D and Kujur, A and Badoni, S and Laxmi, A and Kumar, V and Tripathi, S and Laxmipathi Gowda, C L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea. DNA Research, 22 (2). pp. 1-11. ISSN 1340-2838
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Gopalakrishnan, S and Singh, M and Swarnalakshmi, K and Srinivas, V and Rathore, A and Upadhyaya, H D and Basu, P S and Chaturvedi, S K (2017) Assessment of nodulation potential in mini-core genotypes and land races of chickpea. Journal of Food Legumes, 30 (2). pp. 65-72. ISSN 0970-6380
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Upadhyaya, H D and Wang, L and Prakash, C S and Liu, Y and Gao, L and Meng, R and Seetharam, K and Gowda, C L L and Ganesamurthy, K and Singh, S K and Kumar, R and Li, J and Wang, Y (2022) Genome-wide association mapping identifies an SNF4 ortholog that impacts biomass and sugar yield in sorghum and sugarcane. Journal of Experimental Botany, 73 (11). pp. 3584-3596. ISSN 1460-2431
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Sood, S and Khulbe, R K and Arun Kumar, R and Agrawal, P K and Upadhyaya, H D (2015) Barnyard millet global core collection evaluation in the submontane Himalayan region of India using multivariate analysis. The Crop Journal, 3 (6). pp. 517-525. ISSN 2095-5421
Divakara, B N and Upadhyaya, H D and Fandohan, B (2012) Identification and divergence studies of genotypes of Tamarindus indica (Fabaceae) with superior pod traits. International Journal of Biological and Chemical Sciences. pp. 1-19. (In Press)
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Upadhyaya, H D and Kumar, S and Gowda, C L L and Singh, Sube (2006) Two major genes for seed size in chickpea (Cicer arietinum L.). Euphytica, 147 (3). pp. 311-315.
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Gopalakrishnan, S and Singh, M and Swarnalakshmi, K and Srinivas, V and Rathore, A and Upadhyaya, H D and Basu, P S and Chaturvedi, S K (2017) Assessment of nodulation potential in mini-core genotypes and land races of chickpea. Journal of Food Legumes, 30 (2). pp. 65-72. ISSN 0970-6380
Roorkiwal, M and Thudi, M and Gaur, P M and Upadhyaya, H D and Singh, N P and Varshney, R K (2015) Chickpea translational genomics in the ‘whole genome’ era. Legume Perspectives (7). pp. 7-9. ISSN 2340-1559
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Basu, U and Sharma, A and Bajaj, D and Malik, N and Jha, U C and Upadhyaya, H D and Parida, S K (2021) The DNA Replication, Repair, and Recombination Pathway Genes Modulating Yield and Stress Tolerance Traits in Chickpea. Plant Molecular Biology Reporter, 40. pp. 119-135. ISSN 1572-9818
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Kashiwagi, J and Krishnamurthy, L and Singh, Sube and Gaur, P M and Upadhyaya, H D and Panwar, J D S and Basu, P S and Ito, O and Tobita, S (2006) Relationships between Transpiration Efficiency and Carbon Isotope Discrimination in Chickpea (C. arietinum L). Journal of SAT Agricultural Research, 2 (1). pp. 1-3. ISSN 0973-3094
Upadhyaya, H D and Kashiwagi, J and Varshney, R K and Gaur, P M and Saxena, K B and Krishnamurthy, L and Gowda, C L L and Pundir, R P S and Chaturvedi, S K and Basu, P S and Singh, I P (2010) Phenotyping chickpeas and pigeonpeas for adaptation to drought. In: Drought phenotyping in crops: from theory to practice. Generation Challenge Programme, pp. 347-355.
Sood, S and Khulbe, R K and Gupta, A K and Agrawal, P K and Upadhyaya, H D and Bhatt, J C (2015) Barnyard millet – a potential food and feed crop of future. Plant Breeding, 134 (2). pp. 135-147. ISSN 0179-9541
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Wallace, J G and Upadhyaya, H D and Vetriventhan, M and Buckler, E S and Hash, C T and Ramu, P (2015) The Genetic Makeup of a Global Barnyard Millet Germplasm Collection. Plant Genome, 08 (01). 01-07. ISSN 1940-3372
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress (IAC), November 6 - 9, 2016, New Delhi, India.
Motagi, B N and Desmae, H M and Ajeigbe, H A and Echekwu, C and Sako, D and Tabo, R and Monyo, E and Upadhyaya, H D and Varshney, R K (2016) Germplasm Enhancement for Increasing Groundnut Productivity and Production in West and Central Africa. In: 1st International Agrobiodiversity Congress, November 06-09, 2016, New Delhi, India.
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Mace, E S and Phong, D T and Upadhyaya, H D and Chandra, S and Crouch, J H (2006) SSR analysis of cultivated groundnut (Arachis hypogaea L.) germplasm resistant to rust and late leaf spot diseases. Euphytica, 152 (3). pp. 317-330.
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Divakara, B N and Upadhyaya, H D and Laxmi, A and Das, R (2015) Identification of diverse genotypes with high oil content in Madhuca latifolia for further use in tree improvement. Journal of Forestry Research, 26 (02). pp. 369-379. ISSN 1993-0607
Divakara, B N and Upadhyaya, H D and Krishnamurthy, R (2011) Identification and evaluation of diverse genotypes in Pongamia pinnata (L.) Pierre. for genetic improvement in seed traits. Journal of Biodiversity and Ecological Sciences, 1 (3). pp. 179-190. ISSN 2008-9287
Divakara, B N and Upadhyaya, H D and Laxmi, A and Das, R (2015) Identification of diverse genotypes with high oil content in Madhuca latifolia for further use in tree improvement. Journal of Forestry Research, 26 (02). pp. 369-379. ISSN 1993-0607
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Divakara, B N and Upadhyaya, H D and Laxmi, A and Das, R (2015) Identification of diverse genotypes with high oil content in Madhuca latifolia for further use in tree improvement. Journal of Forestry Research, 26 (02). pp. 369-379. ISSN 1993-0607
Huang, L and Jiang, H and Ren, X and Upadhyaya, H D and et al, . (2012) Abundant Microsatellite Diversity and Oil Content in Wild Arachis Species. Plos One, 7 (11). pp. 1-10. ISSN 1932-6203
Varshney, R K and Thudi, M and Upadhyaya, H D and Dwivedi, S and Udupa, S and Furman, B and Baum, M and Hoisington, D (2014) A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.). Plant Genetic Resources, 12 (S1). S118-S120. ISSN 1479-2621
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Varshney, R K and Thudi, M and Upadhyaya, H D and Dwivedi, S and Udupa, S and Furman, B and Baum, M and Hoisington, D (2014) A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.). Plant Genetic Resources, 12 (S1). S118-S120. ISSN 1479-2621
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Divakara, B N and Upadhyaya, H D and Fandohan, B (2012) Identification and divergence studies of genotypes of Tamarindus indica (Fabaceae) with superior pod traits. International Journal of Biological and Chemical Sciences. pp. 1-19. (In Press)
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Upadhyaya, H D and Dwivedi, S L and Varshney, R K and Gowda, C L L and Bhattacharjee, R and Hoisington, D A and Vadez, V (2009) Enhancing the value of legume genetic resources using core/mini core and applied genomic tools. In: International conference on Current trends in Biotechnology, 19-21 Feb. 2009, Meerut, India.
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Alexander, G and Ravi, D and Ramakrishna Reddy, Ch and Saxena, K B and Hanson, J and Upadhyaya, H D and Blummel, M (2007) Forage yield and quality in pigeonpea germplasm lines. Journal of SAT Agricultural Research, 3 (1). pp. 1-3. ISSN 0973-3094
Alexander, G and Ravi, D and Ramakrishna Reddy, Ch and Saxena, K B and Hanson, J and Upadhyaya, H D and Blummel, M (2007) Forage yield and quality in pigeonpea germplasm lines. Journal of SAT Agricultural Research, 3 (1). pp. 1-3. ISSN 0973-3094
Blummel, M and Ramakrishna Reddy, Ch and Ravi, D and Nigam, S N and Upadhyaya, H D (2005) Food-fodder traits in groundnut. Journal of SAT Agricultural Research, 1 (1). pp. 1-3. ISSN 0973-3094
Dwivedi, S and Upadhyaya, H D and Subudhi, P and Gehring, C and Bajic, V and Ortiz, R (2010) Enhancing Abiotic Stress Tolerance in Cereals Through Breeding and Transgenic Interventions. Plant Breeding Reviews, 33. pp. 31-114.
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Hay, F R and Hamilton, N R S and Furman, B J and Upadhyaya, H D and Reddy, K N and Singh, S K (2013) Cereals. In: Conservation of Tropical Plant Species. Springer, New York, pp. 293-315. ISBN 978-1-4614-3776-5
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Noriega, I L and Halewood, M and Abberton, M and Amri, A and Angarawai, I I and Anglin, N and Blummel, M and Bouman, B and Campos, H and Costich, D and Ellis, D and Gaur, P M and Guarino, L and Hanson, J and Kommerell, V and Kumar, L and Lusty, C and Ndjiondjop, M N and Payne, T and Peters, M and Popova, E and Gangashetty, P I and Sackville-Hamilton, R and Tabo, R and Upadhyaya, H D and Yazbek, M and Wenzl, P (2019) CGIAR Operations under the Plant Treaty Framework. Crop Science (TSI), 59. pp. 1-14. ISSN 0011-183X
Sinha, P and Singh, V K and Saxena, R K and Khan, A W and Abbai, R and Chitikineni, A and Desai, A and Molla, J and Upadhyaya, H D and Kumar, A and Varshney, R K (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.). Plant Biotechnology Journal (TSI). pp. 1-9. ISSN 1467-7644
Hay, F R and Hamilton, N R S and Furman, B J and Upadhyaya, H D and Reddy, K N and Singh, S K (2013) Cereals. In: Conservation of Tropical Plant Species. Springer, New York, pp. 293-315. ISBN 978-1-4614-3776-5
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Nigam, S N and Upadhyaya, H D and Chandra, S and Rao, R C N and Wright, G C and Reddy, A G S (2001) Gene effects for specific leaf area and harvest index in three crosses of groundnut (Arachis hypogaea). Annals of Applied Biology, 139 (3). pp. 301-306. ISSN 1744-7348
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Krishnamurthy, L and Kashiwagi, J and Tobita, S and Ito, O and Upadhyaya, H D and Gowda, C L L and Gaur, P M and Sheshshayee, M S and Singh, Sube and Vadez, V and Varshney, R K (2013) Variation in carbon isotope discrimination and its relationship with harvest index in the reference collection of chickpea germplasm. Functional Plant Biology, 14 (12). pp. 1350-1361. ISSN 1445-4408
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.). Field Crops Research, 201. pp. 146-161. ISSN 03784290
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Subba Rao, G V and Nakahara, K and Ando, Y and Sahrawat, K L and Deshpande, S P and Srinivasa Rao, P and Upadhyaya, H D and Hash, C T (2015) Biological nitrification inhibition (BNI) activity in sorghum: Potential role for enhancing nitrogen-use efficiency (NUE). In: Millets : Promotion for Food, Feed, Fodder, Nutritional and Environment Security, Proceedings of Global Consultation on Millets Promotion for Health & Nutritional Security. Society for Millets Research, ICAR Indian Institute of Millets Research, Hyderabad, pp. 91-96. ISBN 8189335529
Kashiwagi, J and Krishnamurthy, L and Gaur, P M and Upadhyaya, H D and Varshney, R K and Tobita, S (2013) Traits of relevance to improve yield under terminal drought stress in chickpea (C. arietinum L.). Field Crops Research, 145 (1). pp. 88-95. ISSN 0378-4290
Subbarao, G V and Hossain, Z A K M and Nakahara, K and Ishikawa, T and Yanbuaban, M and Yoshihashi, T and Ono, H and Mitsuru, Y and Hash, C T and Upadhyaya, H D and Srinivasa, P and Reddy, B V S and Ito, O and Sahrawat, K L (2009) Biological Nitrification Inhibition (BNI) Potential in Sorghum. In: The Proceedings of the International Plant Nutrition Colloquium XVI, Department of Plant Sciences, UC Davis, 2009, UC Davis,California,United States.
Kashiwagi, J and Krishnamurthy, L and Singh, Sube and Gaur, P M and Upadhyaya, H D and Panwar, J D S and Basu, P S and Ito, O and Tobita, S (2006) Relationships between Transpiration Efficiency and Carbon Isotope Discrimination in Chickpea (C. arietinum L). Journal of SAT Agricultural Research, 2 (1). pp. 1-3. ISSN 0973-3094
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Purushothaman, R and Thudi, M and Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Gowda, C L L and Varshney, R K (2015) Association of mid-reproductive stage canopy temperature depression with the molecular markers and grain yields of chickpea (Cicer arietinum L.) germplasm under terminal drought. Field Crops Research, 174. pp. 1-11. ISSN 0378-4290
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea. Functional Plant Biology, 44. pp. 235-252. ISSN 1445-4408
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2016) Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.). Field Crops Research, 197 (-). pp. 10-27. ISSN 03784290
Krishnamurthy, L and Upadhyaya, H D and Purushothaman, R and Gowda, C L L and Kashiwagi, J and Dwivedi, S L and Singh, Sube and Vadez, V (2014) The extent of variation in salinity tolerance of the minicore collection of finger millet (Eleusine coracana L. Gaertn.) germplasm. Plant Science, 227. pp. 51-59. ISSN 0168-9452
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Johnson, M and Deshpande, S P and Vetriventhan, M and Upadhyaya, H D and Wallace, J G (2019) Genome-Wide Population Structure Analyses of Three Minor Millets: Kodo Millet, Little Millet, and Proso Millet. The Plant Genome (TSI), 12 (3). pp. 1-9. ISSN 1940-3372
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Prasad, P V V and Kakani, V G and Upadhyaya, H D (2010) Growth and production of groundnut. In: Soils, Plant Growth and Crop Production. Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices of the UNESCO , Oxford UK, pp. 1-26.
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Opole, R A and Prasad, P V V and Djanaguiraman, M and Vimala, K and Kirkham, M B and Upadhyaya, H D (2018) Thresholds, sensitive stages and genetic variability of finger millet to high temperature stress. Journal of Agronomy and Crop Science (TSI), 204 (5). pp. 477-492. ISSN 09312250
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Sastry, D V S S R and Upadhyaya, H D and Srinivas, T R (2019) Variation for seed physical and hydration properties of chickpea (Cicer arietinum L.) mini core collection and their relevance to conservation and utilization. Plant Genetic Resources: Characterization and Utilization (TSI). pp. 1-14. ISSN 1479-2621
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Venkateswaran, K and Muraya, M and Dwivedi, S L and Upadhyaya, H D (2014) Wild Sorghums—Their Potential Use in Crop Improvement. In: Genetics, Genomics and Breeding of Sorghum. Series on Genetics, Genomics and Breeding of Crop Plants . CRC Press (Taylor & Francis), Boca Raton, pp. 56-89. ISBN 9781482210088
Sinha, P and Singh, V K and Saxena, R K and Khan, A W and Abbai, R and Chitikineni, A and Desai, A and Molla, J and Upadhyaya, H D and Kumar, A and Varshney, R K (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.). Plant Biotechnology Journal (TSI). pp. 1-9. ISSN 1467-7644
Dwivedi, S L and Lammerts van Bueren, E T and Ceccarelli, S and Grando, S and Upadhyaya, H D and Ortiz, R (2017) Diversifying Food Systems in the Pursuit of Sustainable Food Production and Healthy Diets. Trends in Plant Science, 22 (10). pp. 842-856. ISSN 13601385
Dwivedi, S and Upadhyaya, H D and Subudhi, P and Gehring, C and Bajic, V and Ortiz, R (2010) Enhancing Abiotic Stress Tolerance in Cereals Through Breeding and Transgenic Interventions. Plant Breeding Reviews, 33. pp. 31-114.
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Challinor, A J and Wheeler, T and Hemming, D and Upadhyaya, H D (2009) Ensemble yield simulations: crop and climate uncertainties, sensitivity to temperature and genotypic adaptation to climate change. Climate Research (CR), 38 (2). pp. 117-127. ISSN 0936-577X
Khairwal, I S and Yadav, S K and Rai, K N and Upadhyaya, H D and Kachhawa, D and Nirwan, B and Bhattacharjee, R and Rajpurohit, B S and Dangaria, C J and Srikant, - (2007) Evaluation and identification of promising pearl millet germplasm for grain and fodder traits. Journal of SAT Agricultural Research, 5 (1). pp. 1-6. ISSN 0973-3094
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Gowda, C L L and Pundir, R P S and Upadhyaya, H D and Seymour, M and Ali, M and Rahman, M M and Zong, X and Khalil, S and Haqqani, A M and Sabaghpour, S H and Maythan, A and Mligo, J K (2008) Impact of research and development in food legumes on production and productivity in the last two deacdes. In: Proceedings of the Fourth Intemational Food Legumes Research Conference, 18-22 October 2005, New Delhi, India.
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Waliyar, F and et al, . (2005) Management of Aflatoxins in groundnut in Southern India. In: Summary proceedings of the International peanut conference 2005 “Prospects and emerging opportunities for peanut quality and utilization technology”, 9-12 Jan 2005, Bangkok, Thailand..
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Basu, U and Upadhyaya, H D and Srivastava, R and Daware, A and Malik, N and Sharma, A and Bajaj, D and Narnoliya, L and Thakro, V and Kujur, A and Tripathi, S and Bharadwaj, C and Hegde, V S and Pandey, A K and Singh, A K and Tyagi, A K and Parida, S K (2019) ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea. Plant Physiology (TSI), 180 (1). pp. 253-275. ISSN 0032-0889
Singh, M and Upadhyaya, H D and Bisht, I S (2013) Genetic and Genomic Resources of Grain Legume Improvement. Elsevier Inc. ISBN 978-0-12-397935-3
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Bonham, C A and Dulloo, E and Mathur, P and Brahmi, P and Tyagi, V and Tyagi, R K and Upadhyaya, H D (2010) Plant Genetic Resources and Germplasm Use in India. Asian Biotechnology and Development Review, 12 (3). pp. 17-34.
Sardana, S and Upadhyaya, H D and Dhillon, B S (2004) Genetic resources of pulse crops - present status and future plans. In: Pulses in new perspective: proceedings of the National Symposium on Crop Diversification and Natural Resource Management, 20-22 December 2003, Indian Institute of Pulse Research, Kanpur, India.
Venkateswaran, K and Muraya, M and Dwivedi, S L and Upadhyaya, H D (2014) Wild Sorghums—Their Potential Use in Crop Improvement. In: Genetics, Genomics and Breeding of Sorghum. Series on Genetics, Genomics and Breeding of Crop Plants . CRC Press (Taylor & Francis), Boca Raton, pp. 56-89. ISBN 9781482210088
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Subbarao, G V and Hossain, Z A K M and Nakahara, K and Ishikawa, T and Yanbuaban, M and Yoshihashi, T and Ono, H and Mitsuru, Y and Hash, C T and Upadhyaya, H D and Srinivasa, P and Reddy, B V S and Ito, O and Sahrawat, K L (2009) Biological Nitrification Inhibition (BNI) Potential in Sorghum. In: The Proceedings of the International Plant Nutrition Colloquium XVI, Department of Plant Sciences, UC Davis, 2009, UC Davis,California,United States.
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Basu, U and Narnoliya, L and Srivastava, R and Sharma, A and Bajaj, D and Daware, A and Thakro, V and Malik, N and Upadhyaya, H D and Tripathi, S and Hegde, V S and Tyagi, A K and Parida, S K (2019) CLAVATA signaling pathway genes modulating flowering time and flower number in chickpea. Theoretical and Applied Genetics (TSI), 132 (7). pp. 2017-2038. ISSN 0040-5752
Basu, U and Srivastava, R and Bajaj, D and Thakro, V and Daware, A and Malik, N and Upadhyaya, H D and Parida, S K (2018) Genome-wide generation and genotyping of informative SNPs to scan molecular signatures for seed yield in chickpea. Scientific Reports (TSI), 8 (13240). pp. 1-11. ISSN 2045-2322
Basu, U and Bajaj, D and Sharma, A and Malik, N and Daware, A and Narnoliya, L and Thakro, V and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2018) Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant, Cell & Environment (TSI). pp. 1-16. ISSN 0140-7791
Shimray, P W and Bajaj, D and Srivastava, R and Daware, A and Upadhyaya, H D and Kumar, R and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter. pp. 1-13. ISSN 0735-9640
Upadhyaya, H D and Bajaj, D and Srivastava, R and Daware, A and Basu, U and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Genetic dissection of plant growth habit in chickpea. Functional & Integrative Genomics. pp. 1-13. ISSN 1438-793X
Parida, S K and Kujur, A and Bajaj, D and Das, S and Srivastava, R. and Badoni, S and Laxmi, - and Thakro, V and Basu, U and Daware, A and Upadhyaya, H D and Tripathi, S and Bharadwaj, C (2017) Integrative genome-wide association studies (GWAS) to understand complex genetic architecture of quantitative traits in chickpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Kujur, A and Upadhyaya, H D and Bajaj, D and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea. Scientific Reports, 6 (27968). 01-09. ISSN 2045-2322
Upadhyaya, H D and Bajaj, D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genetic dissection of seed-iron and zinc concentrations in chickpea. Scientific Reports, 06 (24050). 01-12. ISSN 2045-2322
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Bajaj, D and Upadhyaya, H D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes for dissecting complex branch number trait in chickpea. Plant Science, 245. pp. 61-70. ISSN 0168-9452
Upadhyaya, H D and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2015) A genome-scale integrated approach aids in genetic dissection of complex flowering time trait in chickpea. Plant Molecular Biology. 01-18. ISSN 0167-4412
Das, S and Upadhyaya, H D and Bajaj, D and Kujur, A and Badoni, S and Laxmi, A and Kumar, V and Tripathi, S and Laxmipathi Gowda, C L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea. DNA Research, 22 (2). pp. 1-11. ISSN 1340-2838
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. Frontiers in Plant Science, 06 (162). 01-19. ISSN 1664-462X
Bajaj, D and Upadhyaya, H D and Khan, Y and Das, S and Badoni, S and Shree, T and Kumar, V and Tripathi, S and Gowda, C L L and Singh, S and Sharma, S and Tyagi, A K and Chattopdhyay, D and Parida, S K (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea. Scientific Reports, 5 (9264). pp. 1-14. ISSN 2045-2322
Bajaj, D and Saxena, M S and Kujur, A and Das, S and Badoni, S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea. Journal of Experimental Botany, 66 (5). pp. 1271-1290. ISSN 0022-0957
Das, S and Upadhyaya, H D and Srivastava, R and Bajaj, D and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea. DNA Research. 01-10. ISSN 1340-2838
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea. Nature Scientific Reports, 5 (11166). pp. 1-20. ISSN 2045-2322
Kujur, A and Upadhyaya, H D and Shree, T and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2014) Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea. Scientific Reports, 5 (9468). pp. 1-13. ISSN 2045-2322
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Upadhyaya, H D and Bajaj, D and Narnoliya, L and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea. Frontiers in Plant Science, 07 (302). 01-13. ISSN 1664-462X
Bajaj, D and Das, S and Upadhyaya, H D and Ranjan, R and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea. Frontiers in Plant Science, 6 (979). 01-18. ISSN 1664-462X
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Basu, U and Sharma, A and Bajaj, D and Malik, N and Jha, U C and Upadhyaya, H D and Parida, S K (2021) The DNA Replication, Repair, and Recombination Pathway Genes Modulating Yield and Stress Tolerance Traits in Chickpea. Plant Molecular Biology Reporter, 40. pp. 119-135. ISSN 1572-9818
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Tyagi, A K and Jain, M and Parida, S K (2014) An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genes for seed weight in chickpea. Molecular Breeding, 34 (1). pp. 241-265. ISSN 1572-9788
Kujur, A and Bajaj, D and Saxena, M S and Tripathi, S and Upadhyaya, H D and Gowda, C L L and Singh, Sube and Jain, M and Tyagi, A K and Parida, S K (2013) Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping. DNA Research, 20 (4). pp. 355-374. ISSN 1756-1663
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Upadhyaya, H D and Bajaj, D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genetic dissection of seed-iron and zinc concentrations in chickpea. Scientific Reports, 06 (24050). 01-12. ISSN 2045-2322
Bajaj, D and Upadhyaya, H D and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Identification of candidate genes for dissecting complex branch number trait in chickpea. Plant Science, 245. pp. 61-70. ISSN 0168-9452
Upadhyaya, H D and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2015) A genome-scale integrated approach aids in genetic dissection of complex flowering time trait in chickpea. Plant Molecular Biology. 01-18. ISSN 0167-4412
Das, S and Upadhyaya, H D and Bajaj, D and Kujur, A and Badoni, S and Laxmi, A and Kumar, V and Tripathi, S and Laxmipathi Gowda, C L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea. DNA Research, 22 (2). pp. 1-11. ISSN 1340-2838
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. Frontiers in Plant Science, 06 (162). 01-19. ISSN 1664-462X
Bajaj, D and Upadhyaya, H D and Khan, Y and Das, S and Badoni, S and Shree, T and Kumar, V and Tripathi, S and Gowda, C L L and Singh, S and Sharma, S and Tyagi, A K and Chattopdhyay, D and Parida, S K (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea. Scientific Reports, 5 (9264). pp. 1-14. ISSN 2045-2322
Kujur, A and Bajaj, D and Upadhyaya, H D and Das, S and Ranjan, R and Shree, T and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea. Nature Scientific Reports, 5 (11166). pp. 1-20. ISSN 2045-2322
Kujur, A and Upadhyaya, H D and Shree, T and Bajaj, D and Das, S and Saxena, M S and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2014) Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea. Scientific Reports, 5 (9468). pp. 1-13. ISSN 2045-2322
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Bajaj, D and Srivastava, R and Nath, M and Tripathi, S and Bharadwaj, C and Upadhyaya, H D and Tyagi, A K and Parida, S K (2016) EcoTILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea. Frontiers in Plant Science, 07 (450). 01-09. ISSN 1664-462X
Upadhyaya, H D and Bajaj, D and Narnoliya, L and Das, S and Kumar, V and Gowda, C L L and Sharma, S and Tyagi, A K and Parida, S K (2016) Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea. Frontiers in Plant Science, 07 (302). 01-13. ISSN 1664-462X
Bajaj, D and Das, S and Upadhyaya, H D and Ranjan, R and Badoni, S and Kumar, V and Tripathi, S and Gowda, C L L and Sharma, S and Singh, S and Tyagi, A K and Parida, S K (2015) A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea. Frontiers in Plant Science, 6 (979). 01-18. ISSN 1664-462X
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Puppala, N and Upadhyaya, H D and Dwivedi, S L and Kottapalli, K R and Payton, P and Burow, M (2008) Genetic enhancement of Valencia core collection and molecular characterization of U.S. peanut mini core collection using SSR markers. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Mace, E S and Yuejin, W and Boshou, L and Upadhyaya, H D and Chandra, S and Crouch, J H (2007) Simple sequence repeat (SSR)-based diversity analysis of groundnut (Arachis hypogaea L.) germplasm resistant to bacterial wilt. Plant Genetic Resources: Characterization and Utilization, 5 (1). pp. 27-36.
Jiang, H and Ren, X and Zhang, X and Huang, J and Lei, Y and Yan, L and Liao, B and Upadhyaya, H D and Holbrook, C C (2010) Comparison of genetic diversity based on SSR markers between peanut mini core collections from China and ICRISAT. Acta Agronomica Sinica, 36 (7). pp. 1084-1091. ISSN 1875-2780
Liao, B and Lei, Y and Jiang, H and Yan, L and Wan, L and Huang, L and Zhou, X and Luo, H and Chen, Y and Wang, H and Pandey, M K and Sudini, H and Upadhyaya, H D and Varshney, R K (2017) Management of aflatoxin contamination in groundnut by enhancing host-plant resistance. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Hui-Fang, J and Xiao-Ping, R and Sheng-Yu, W and Xiao-Ji, Z and Jia-Quan, H and Bo-Shou, L and Holbrook, C C and Upadhyaya, H D (2010) Development and Evaluation of Peanut Germplasm with Resistance to Aspergillus flavus from Core Collection. Acta Agronomica Sinica, 36 (3). pp. 428-434. ISSN 0496-3490
Hui-Fang, J and Xiao-Ping, R and Bo-Shou, L and Jia-Quan, H and Yong, L and Ben-Yin, C and Guo, B Z and Holbrook, C C and Upadhyaya, H D (2008) Peanut Core Collection Established in China and Compared with ICRISAT Mini Core Collection. Acta Agronomica Sinica, 34 (1). pp. 25-30. ISSN 0496-3490
Prasad, P V V and Kakani, V G and Upadhyaya, H D (2010) Growth and production of groundnut. In: Soils, Plant Growth and Crop Production. Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices of the UNESCO , Oxford UK, pp. 1-26.
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Lalitha, N and Upadhyaya, H D and Krishnamurthy, L and Kashiwagi, J and Kavi Kishor, P B and Singh, S (2015) Assessing Genetic Variability for Root Traits and Identification of Trait-Specific Germplasm in Chickpea Reference Set. Crop Science, 55 (-). 01-12. ISSN 1435-0653
Ramu, P and Billot, C and Rami, J F and Senthilvel, S and Upadhyaya, H D and Reddy, L A and Hash, C T (2013) Assessment of genetic diversity in the sorghum reference set using EST-SSR markers. TAG Theoretical and Applied Genetics, 126 (8). pp. 2051-2064. ISSN 1432-2242
Lalitha, N (2012) Genotypic and Phenotypic Diversity in Chickpea (Cicer arietinum l.) Reference Set. PHD thesis, International Crops Research Institute for the Semi-Arid Tropics.
Hiremath, P J and Kumar, A and Penmetsa, R V and et al, . (2012) Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes. Plant Biotechnology Journal, 10 (6). pp. 716-732. ISSN 1467-7652
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Aruna, R and Rao, D M and Sivaramakrishnan, S and Reddy, L J and Bramel, P and Upadhyaya, H D (2009) Efficiency of three DNA markers in revealing genetic variation among wild Cajanus species. Plant Genetic Resources, 7 (2). pp. 113-121.
Aruna, R and Rao, D M and Reddy, L J and Ramakrishnan, S S and Upadhyaya, H D (2007) Influence of pod maturity and level of domestication on biochemical components in wild and cultivated pigeonpea (Cajanus cajan). Annals of Applied Biology, 151 (1). pp. 25-32.
Aruna, R and Rao, D M and Reddy, L J and Upadhyaya, H D and Sharma, H C (2005) Inheritance of trichomes and resistance to pod borer (Helicoverpa armigera) and their association in interspecific crosses between cultivated pigeonpea (Cajanus cajan) and its wild relative C. scarabaeoides. Euphytica, 145 (3). pp. 247-257. ISSN 1573-5060
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Vetriventhan, M and Azevedo, V C R and Upadhyaya, H D and Nirmalakumari, A and Kane-Potaka, J and Anitha, S and Ceasar, S A and Muthamilarasan, M and Bhat, B V and Hariprasanna, K and Bellundagi, A and Cheruku, D and Backiyalakshmi, C and Santra, D and Vanniarajan, C and Tonapi, V A (2020) Genetic and genomic resources, and breeding for accelerating improvement of small millets: current status and future interventions. The Nucleus (TSI). ISSN 0029-568X
Kumar, S and Malik, J and Thakur, P and Kaistha, S and Sharma, K D and Upadhyaya, H D (2011) Growth and metabolic responses of contrasting chickpea (Cicer arietinum L.) genotypes to chilling stress at reproductive phase. Acta Physiologiae Plantarum, 33 (3). pp. 779-787.
Kumar, S and Nayyar, H and Bhanwara, R K and Upadhyaya, H D (2010) Chilling stress effects on reproductive biology of chickpea. Journal of SAT Agricultural Research, 8. pp. 1-14. ISSN 0973-3094
Kaur, G and Kumar, S and Nayyar, H and Upadhyaya, H D (2008) Cold Stress Injury during the Pod-Filling Phase in Chickpea (Cicer arietinum L.): Effects on Quantitative and Qualitative Components of Seeds. Journal of Agronomy and Crop Science, 194 (6). pp. 457-464. ISSN 1439-037x
Nayyar, H and Kaur, G and Kumar, S and Upadhyaya, H D (2007) Low Temperature Effects during Seed Filling on Chickpea Genotypes (Cicer arietinum L.): Probing Mechanisms affecting Seed Reserves and Yield. Journal Of Agronomy And Crop Science, 193 (5). pp. 336-344. ISSN 0931-2250
Nayyar, H and Singh, S and Kaur, S and Kumar, S and Upadhyaya, H D (2006) Differential Sensitivity of Macrocarpa and Microcarpa Types of Chickpea (Cicer arietinum L.) to Water Stress: Association of Contrasting Stress Response with Oxidative Injury. Journal of Integrative Plant Biology, 48 (11). pp. 1318-1329. ISSN 1744-7909
Nayyar, H and Kaur, S and Singh, Smita and Upadhyaya, H D (2006) Differential sensitivity of Desi (small-seeded) and Kabuli (large-seeded) chickpea genotypes to water stress during seed filling: effects on accumulation of seed reserves and yield. Journal of the Science of Food and Agriculture, 86 (13). pp. 2076-2082. ISSN 0022-5142
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Kim, D H and Kaashyap, M and Rathore, A and Das, R A and Parupalli, S and Upadhyaya, H D and Gopalakrishnan, S and Gaur, P M and Singh, S and Kaur, J and Yasin, M and Varshney, R K (2014) Phylogenetic diversity of Mesorhizobium in chickpea. Journal of Biosciences, 39 (3). pp. 1-5. ISSN 0250-5991
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Singh, Reema and Kumari, N and Upadhyaya, H D and Yadav, R and Vaishali, . and Choi, I and Kumar, R (2013) Molecular analysis for genetic structure of biotic and abiotic stress resistant genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology, 12 (4). pp. 537-540. ISSN 0975-0967
Kim, D H and Kaashyap, M and Rathore, A and Das, R A and Parupalli, S and Upadhyaya, H D and Gopalakrishnan, S and Gaur, P M and Singh, S and Kaur, J and Yasin, M and Varshney, R K (2014) Phylogenetic diversity of Mesorhizobium in chickpea. Journal of Biosciences, 39 (3). pp. 1-5. ISSN 0250-5991
Gopal, K and Upadhyaya, H D and Kulkarni, M S and Jayalakshmi, A S (1992) Reaction of some Gingelly genotypes to powdery Mildew. Current Research, 21. pp. 90-91.
Gopal, K and Upadhyaya, H D (1991) Effect of Bud Necrosis disease wild of groundnut under Field Condition. Indian Phytopathology, 44. pp. 221-223. ISSN 0367-973X
Gopal, K and Reddy, K S and Upadhyaya, H D and Reddy, D R (1991) Host range of sugarcane mosaic virus (SCMV-B) from Rayalaseema. Indian Journal of Virology, 7 (1). pp. 117-119. ISSN 0970-2822
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Khairwal, I S and Yadav, S K and Rai, K N and Upadhyaya, H D and Kachhawa, D and Nirwan, B and Bhattacharjee, R and Rajpurohit, B S and Dangaria, C J and Srikant, - (2007) Evaluation and identification of promising pearl millet germplasm for grain and fodder traits. Journal of SAT Agricultural Research, 5 (1). pp. 1-6. ISSN 0973-3094
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Upadhyaya, H D and Hildebrand, G L and Nigam, S N and Yellaiah, N (2005) Groundnut Cultivar Nyanda (ICGV 93437) Released in Zimbabwe. International Arachis Newsletter (25). pp. 22-24. ISSN 1010-5824
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Dharmaraj, P S and Upadhyaya, H D and Deshpande, V and Sarala, B S and Naragund, V B (1996) R-8808 - a high yielding peanut bud necrosis tolerant groundnut variety. Journal of Oilseeds Research, 13 (1). pp. 111-112. ISSN 0970-2776
Upadhyaya, H D and Gopal, K (1993) Gamma-Ray Variability for some Quantitative Characters in Groundnut. Journal of Oilseeds Research, 10 (1). pp. 153-155. ISSN 0970-2776
Dwivedi, S L and Lammerts van Bueren, E T and Ceccarelli, S and Grando, S and Upadhyaya, H D and Ortiz, R (2017) Diversifying Food Systems in the Pursuit of Sustainable Food Production and Healthy Diets. Trends in Plant Science, 22 (10). pp. 842-856. ISSN 13601385
Dwivedi, S L and Ceccarelli, S and Blair, M W and Upadhyaya, H D and Ashok Kumar, A and Ortiz, R (2016) Landrace Germplasm for Improving Yield and Abiotic Stress Adaptation. Trends in Plant Science, 21 (01). pp. 31-42. ISSN 1360-1385
Gopal, K and Reddy, K S and Upadhyaya, H D and Reddy, D R (1991) Host range of sugarcane mosaic virus (SCMV-B) from Rayalaseema. Indian Journal of Virology, 7 (1). pp. 117-119. ISSN 0970-2822
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Characterization of cultivated chickpea and wild relatives. Crop Genebank Knowledge Base . pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Conservation of chickpea genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Upadhyaya, H D and Sharma, S and Gowda, C L L and Sastry, D V S S R and Singh, Sube and Sharma, S and Amri, A and Street, K and Rukhkyan, N and Antalikova, G and Stoyanova, S and Redden, B and Borner, A (2009) Safety duplication of cultivated chickpea and wild relative genetic resources. The Crop Genebank Knowledge Base. pp. 1-4.
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Waliyar, F and et al, . (2006) Evaluation of new Aspergillus flavus resistant groundnut varieties for agronomic performance in multi-location on-farm trials in Andhra Pradesh, India. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Singh, Reema and Kumari, N and Upadhyaya, H D and Yadav, R and Vaishali, . and Choi, I and Kumar, R (2013) Molecular analysis for genetic structure of biotic and abiotic stress resistant genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology, 12 (4). pp. 537-540. ISSN 0975-0967
Desmae, H and Ntare, B and Motagi, B N and Falalou, H and Upadhyaya, H D and Oteng-Frimpong, R and Sako, D and Echekwu, C and Miningou, A and Monyo, E and Varshney, R K (2017) Advances in groundnut breeding for drought prone West and Central Africa. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea. Functional Plant Biology, 44. pp. 235-252. ISSN 1445-4408
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2016) Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.). Field Crops Research, 197 (-). pp. 10-27. ISSN 03784290
Roorkiwal, M and Thudi, M and Gaur, P M and Upadhyaya, H D and Singh, N P and Varshney, R K (2015) Chickpea translational genomics in the ‘whole genome’ era. Legume Perspectives (7). pp. 7-9. ISSN 2340-1559
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Cuevas, H E and Zhou, C and Tang, H and Khadke, P P and Das, S and Lin, Y R and Ge, Z and Clemente, T and Upadhyaya, H D and Hash, C T and Paterson, A W (2016) The evolution of photoperiod-insensitive flowering in sorghum, a genomic model for panicoid grasses. Molecular Biology and Evolution, 33 (09). pp. 2417-2428. ISSN 0737-4038
Bhagyawant, S S and Gautam, A K and Narvekar, D T and Gupta, N and Bhadkaria, A and Srivastava, N and Upadhyaya, H D (2018) Biochemical diversity evaluation in chickpea accessions employing mini-core collection. Physiology and Molecular Biology of Plants (TSI). pp. 1-19. ISSN 0971-5894
Sameer Kumar, C V and Ganga Rao, N V P R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Siambi, M and Silim, S N and Reddy, K N and Hingane, A J and Sharma, M and Sharma, S and Lyimo, S D and Ubwe, R and Makenge, M and Gad, K and Kimurto, P K and Amane, M and Kanenga, K and Obong, Y and Monyo, E and Ojiewo, C O and Mallela Venkata, N K and Polineni Rao, J and Lakkireddy, P and Chourat, S and Singh, I and Sajja, S and Beliappa, S H and Varshney, R K (2019) Pigeonpea improvement: An amalgam of breeding and genomic research. Plant Breeding (TSI). pp. 1-10. ISSN 01799541
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Pandey, M K and Upadhyaya, H D and Rathore, A and Vadez, V and Sheshshayee, M S and Sriswathi, M and Govil, M and Kumar, A and Gowda, M V and Sharma, S and Hamidou, F and Kumar, V A and Khera, P and Bhat, R S and Khan, A W and Singh, S and Li, H and Monyo, E and Nadaf, H L and Mukri, G and Jackson, S A and Guo, B and Liang, X and Varshney, R K (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLoS One, 9 (8). pp. 1-14. ISSN 1932-6203
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Dwivedi, S L and Upadhyaya, H D and Balaji, J and Buhariwalla, H K and Blair, M W and Ortiz, R and Crouch, J H and Serraj, R (2006) Using Genomics to Exploit Grain Legume Biodiversity in Crop Improvement. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 171-358. ISBN 978-0-471-73215-0
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Ortiz, R and Upadhyaya, H D (2017) Genetic Resources: From Mendel’s peas to underutilized legume species. Legume Perspectives, 14. pp. 15-17.
Dwivedi, S L and Ceccarelli, S and Blair, M W and Upadhyaya, H D and Ashok Kumar, A and Ortiz, R (2016) Landrace Germplasm for Improving Yield and Abiotic Stress Adaptation. Trends in Plant Science, 21 (01). pp. 31-42. ISSN 1360-1385
Dwivedi, S L and Lammerts van Bueren, E T and Ceccarelli, S and Grando, S and Upadhyaya, H D and Ortiz, R (2017) Diversifying Food Systems in the Pursuit of Sustainable Food Production and Healthy Diets. Trends in Plant Science, 22 (10). pp. 842-856. ISSN 13601385
Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Vetriventhan, M (2011) Phenotypic and genetic diversity in the foxtail millet (setaria italica (l.) p. beauv.) core collection). PHD thesis, Tamil Nadu Agricultural University.
Bharathi, A and Veerabathiran, P and Gowda, C L L and Upadhyaya, H D (2013) Genetic Diversity of Global Finger Millet Composite Collection Based on Qualitative Traits and Biological Races. Madras Agricultural Journal, 100 (4-6). pp. 277-279. ISSN 0024-9602
Bharathi, A and Veerabadhiran, P and Gowda, C L L and Upadhyaya, H D (2013) Genetic Variability and Correlation Analysis in Global Composite Collection of Finger Millet (Eleusine coracana (L.) Gaertn). Madras Agricultural Journal, 100 (4-6). pp. 280-282. ISSN 0024-9602
Vetriventhan, M and Upadhyaya, H D and Deshpande, S P and Johnson, M S and Wallace, J G and Victor, A and Naresh, D and Rayaprolu, L and Singh, K and Mayes, S (2024) Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.). Scientific Reports (TSI), 14. pp. 1-17. ISSN 2045-2322
Upadhyaya, H D and Wang, L and Prakash, C S and Liu, Y and Gao, L and Meng, R and Seetharam, K and Gowda, C L L and Ganesamurthy, K and Singh, S K and Kumar, R and Li, J and Wang, Y (2022) Genome-wide association mapping identifies an SNF4 ortholog that impacts biomass and sugar yield in sorghum and sugarcane. Journal of Experimental Botany, 73 (11). pp. 3584-3596. ISSN 1460-2431
Bharathi, A (2011) Phenotypic and Genotypic Diversity of Global Finger Millet (Eleusine coracana (L.) Gaertn. ) Composite Collection. PHD thesis, Tamil Nadu Agricultural University.
Seetharam, K (2011) Phenotypic assessment of sorghum (Sorghum bicolor L. Moench) germplasm reference set for yield and related traits under post flowering drought conditions. PHD thesis, Tamil Nadu Agricultural University.
Dwivedi, S L and Puppala, N and Upadhyaya, H D and Manivannan, N and Singh, Sube (2008) Developing a core collection of peanut specific to Valencia market type. Crop Science, 48 (2). pp. 625-632.
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Varshney, R K and Parzies, H K (2014) Population structure and linkage disequilibrium of ICRISAT foxtail millet (Setaria italica (L.) P. Beauv.) core collection. Euphytica, 196 (3). pp. 423-435. ISSN 1573-5060
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Parzies, H K and Bharathi, A and Varshney, R K and Gowda, C L L (2012) Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection. Plant Genetic Resources, 10 (3). pp. 214-223. ISSN 1479-2621
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Burow, M D and Selvaraj, M G and Upadhyaya, H D and Ozias-Akins, P and Guo, B and Bertioli, D J and Leal-Bertioli, S C M and Moretzsohn, M C and Guimaraes, P M (2008) Genomics of Peanut, a Major Source of Oil and Protein. In: Genomics of Tropical Crop Plants. Springer New York, New York, USA, pp. 421-440. ISBN 978-0-387-71218-5
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Puppala, N and Upadhyaya, H D and Dwivedi, S L and Kottapalli, K R and Payton, P and Burow, M (2008) Genetic enhancement of Valencia core collection and molecular characterization of U.S. peanut mini core collection using SSR markers. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Ramakrishnan, M and Ceasar, S A and Vinod, K K and Duraipandiyan, V and Ajeesh Krishna, T P and Upadhyaya, H D and Al-Dhabi, N A and Ignacimuthu, S (2017) Identification of putative QTLs for seedling stage phosphorus starvation response in finger millet (Eleusine coracana L. Gaertn.) by association mapping and cross species synteny analysis. PLoS ONE. pp. 1-27. ISSN 1932-6203
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Upadhyaya, H D and Vetriventhan, M and Asiri, A M and Azevedo, V C R and Sharma, H C and Sharma, R and Sharma, S P and Wang, Y (2019) Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement. Agriculture, 9(6) (121). pp. 1-17. ISSN 2077-0472
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Irshad Ahmed, M and Gumma, M K and Thimma Reddy, M and Singh, S K (2017) Sorghum germplasm from West and Central Africa maintained in the ICRISAT genebank: Status, gaps, and diversity. The Crop Journal, 5 (6). pp. 518-532. ISSN 22145141
Grace, D and Mahuku, G and Hoffmann, V and Atherstone, C and Upadhyaya, H D and Bandyopadhyay, R (2015) International agricultural research to reduce food risks: case studies on aflatoxins. Food Security, 07 (03). pp. 569-582. ISSN 1876-4517
Babu, T K and Sharma, R and Thakur, R P and Upadhyaya, H D and Reddy, P N and Girish, A G (2015) Selection of Host Differentials for Elucidating Pathogenic Variation in Magnaporthe grisea Populations Adapted to Finger Millet (Eleusine coracana). Plant Disease, 99 (12). pp. 1784-1789. ISSN 0191-2917
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Gowda, C L L and Reddy, T M and Ramachandran, S (2015) Identification of Gaps in Pigeonpea Germplasm from East and Southern Africa Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 28 (2). pp. 180-188. ISSN 0971-8184
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Ahmed, M I and Reddy, M T (2018) Latitudinal Adaptation of Flowering Response to Photoperiod and Temperature in the World Collection of Sorghum Landraces. Crop Science (TSI). ISSN 0011-183X
Upadhyaya, H D and Narsimha Reddy, K and Vetriventhan, M and Gumma, M K and Irshad Ahmed, M and Manyasa, E O and Thimma Reddy, M and Singh, S K (2017) Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank. Australian Journal of Crop Science, 11 (4). pp. 424-437. ISSN 1835-2707
Upadhyaya, H D and Reddy, K N and Vetriventhan, M and Gumma, M K and Ahmed, M I and Thimma Reddy, M and Singh, S K (2016) Status, genetic diversity and gaps in sorghum germplasm from South Asia conserved at ICRISAT genebank. Plant Genetic Resources. pp. 1-12. ISSN 1479-2621
Varshney, R K and Thudi, M and Upadhyaya, H D and Dwivedi, S and Udupa, S and Furman, B and Baum, M and Hoisington, D (2014) A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.). Plant Genetic Resources, 12 (S1). S118-S120. ISSN 1479-2621
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Khera, P and Upadhyaya, H D and Pandey, M K and Roorkiwal, M and Sriswathi, M and Janila, P and Guo, Y and McKain, M R and Nagy, E D and Knapp, S J and Leebens-Mack, J and Conner, J A and Ozias-Akins, P and Varshney, R K (2013) Single Nucleotide Polymorphism–based Genetic Diversity in the Reference Set of Peanut (Arachis spp.) by Developing and Applying Cost-Effective Kompetitive Allele Specific Polymerase Chain Reaction Genotyping Assays. The Plant Genome, 6 (3). pp. 1-11. ISSN 1940-3372
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Dwivedi, S L and Bertioli, D J and Crouch, J H and Valls, J F and Upadhyaya, H D and Favero, A and Moretzsohn, M and Paterson, A H (2007) Peanut.Chapter 3. In: Genome Mapping and Molecular Breeding in Plants. Springer-Verlag, New York, pp. 115-151. ISBN 978-3-540-34387-5
Upadhyaya, H D and Varshney, R K and Hoisington, D A and et al, . (2006) Genotyping composite collection of finger millet [Eleusine coracana (L.) Gaertn]. In: Generation Challenge Program Annual Research Meeting, 12-16 September 2006, Sao Paulo, Brazil.
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Challinor, A J and Wheeler, T and Hemming, D and Upadhyaya, H D (2009) Ensemble yield simulations: crop and climate uncertainties, sensitivity to temperature and genotypic adaptation to climate change. Climate Research (CR), 38 (2). pp. 117-127. ISSN 0936-577X
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Vadez, V and Krishnamurthy, L and Hash, C T and Upadhyaya, H D and Borrell, A K (2011) Yield, transpiration efficiency, and water-use variations and their interrelationships in the sorghum reference collection. Crop and Pasture Science, 62 (8). pp. 645-655. ISSN 1836-5795
Waliyar, F and et al, . (2006) Evaluation of new Aspergillus flavus resistant groundnut varieties for agronomic performance in multi-location on-farm trials in Andhra Pradesh, India. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Waliyar, F and et al, . (2005) Management of Aflatoxins in groundnut in Southern India. In: Summary proceedings of the International peanut conference 2005 “Prospects and emerging opportunities for peanut quality and utilization technology”, 9-12 Jan 2005, Bangkok, Thailand..
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Krishnamurthy, L and Turner, N C and Gaur, P M and Upadhyaya, H D and Varshney, R K and Siddique, K H M and Vadez, V (2011) Consistent Variation across Soil Types in Salinity Resistance of a Diverse Range of Chickpea (Cicer arietinum L.) Genotypes. Journal Of Agronomy And Crop Science, 197 (3). pp. 214-227.
Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266
Vadez, V and Krishnamurthy, L and Serraj, R and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K and Turner, N C and Siddique, K H M (2007) Large variation in salinity tolerance in chickpea is explained by differences in sensitivity at the reproductive stage. Field Crops Research, 104 (1-3). pp. 123-129. ISSN 0378-4290
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Basu, U and Bajaj, D and Sharma, A and Malik, N and Daware, A and Narnoliya, L and Thakro, V and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Tyagi, A K and Parida, S K (2018) Genetic dissection of photosynthetic efficiency traits for enhancing seed yield in chickpea. Plant, Cell & Environment (TSI). pp. 1-16. ISSN 0140-7791
Shimray, P W and Bajaj, D and Srivastava, R and Daware, A and Upadhyaya, H D and Kumar, R and Bharadwaj, C and Tyagi, A K and Parida, S K (2017) Identifying Transcription Factor Genes Associated with Yield Traits in Chickpea. Plant Molecular Biology Reporter. pp. 1-13. ISSN 0735-9640
Srivastava, R and Bajaj, D and Sayal, Y K and Meher, P K and Upadhyaya, H D and Kumar, R and Tripathi, S and Bharadwaj, C and Rao, A R and Parida, S K (2016) Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea. Plant Science, 252. pp. 374-387. ISSN 01689452
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Upadhyaya, H D and Valls, J F M and Bertolli, D and et al, . (2006) Molecular characterization of groundnut (Arachis hypogaea L.) composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Roorkiwal, M and Nayak, S N and Thudi, M and Upadhyaya, H D and Brunel, D and Mournet, P and This, D and Sharma, P C and Varshney, R K (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers. Frontiers in Plant Science, 5 (248). pp. 1-11. ISSN 1664-462X
Dwivedi, S L and Sahrawat, K L and Upadhyaya, H D and Mengoni, A and Galardini, M and Bazzicalupo, M and Biondi, E G and Hungria, M and Kaschuk, G and Blair, M W and Ortiz, R (2015) Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation in Grain Legumes. Advances in Agronomy, 129. 01-116. ISSN 0065-2113
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Puppala, N and Upadhyaya, H D and Dwivedi, S L and Kottapalli, K R and Payton, P and Burow, M (2008) Genetic enhancement of Valencia core collection and molecular characterization of U.S. peanut mini core collection using SSR markers. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Rao, N K and Upadhyaya, H D and Sastry, D V S S R and et al, . (2008) A Global Experiment to Explore Ultra Dry Seed Storage Technology and Optimum Condition for Seed Storage Perspectives after 14 Year. Documentation. International Crops Research Institute for the Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.
Ahn, E and Hu, Z and Perumal, R and Prom, L K and Odvody, G and Upadhyaya, H D and Magill, C (2019) Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut. PLoS ONE (TSI), 14 (5). pp. 1-16. ISSN 1932-6203
Jiang, H and Ren, X and Zhang, X and Huang, J and Lei, Y and Yan, L and Liao, B and Upadhyaya, H D and Holbrook, C C (2010) Comparison of genetic diversity based on SSR markers between peanut mini core collections from China and ICRISAT. Acta Agronomica Sinica, 36 (7). pp. 1084-1091. ISSN 1875-2780
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Hui-Fang, J and Xiao-Ping, R and Sheng-Yu, W and Xiao-Ji, Z and Jia-Quan, H and Bo-Shou, L and Holbrook, C C and Upadhyaya, H D (2010) Development and Evaluation of Peanut Germplasm with Resistance to Aspergillus flavus from Core Collection. Acta Agronomica Sinica, 36 (3). pp. 428-434. ISSN 0496-3490
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Hui-Fang, J and Xiao-Ping, R and Bo-Shou, L and Jia-Quan, H and Yong, L and Ben-Yin, C and Guo, B Z and Holbrook, C C and Upadhyaya, H D (2008) Peanut Core Collection Established in China and Compared with ICRISAT Mini Core Collection. Acta Agronomica Sinica, 34 (1). pp. 25-30. ISSN 0496-3490
Wallace, J G and Upadhyaya, H D and Vetriventhan, M and Buckler, E S and Hash, C T and Ramu, P (2015) The Genetic Makeup of a Global Barnyard Millet Germplasm Collection. Plant Genome, 08 (01). 01-07. ISSN 1940-3372
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Ramachandran, S and Kumar, V and Singh, S (2017) Characterization and genetic potential of African pearl millet named landraces conserved at the ICRISAT genebank. Plant Genetic Resources, 15 (5). pp. 438-452. ISSN 1479-2621
Upadhyaya, H D and Reddy, K N and Ahmed, M I and Kumar, V and Gumma, M K and Ramachandran, S (2017) Geographical distribution of traits and diversity in the world collection of pearl millet [Pennisetum glaucum (L.) R. Br., synonym: Cenchrus americanus (L.) Morrone] landraces conserved at the ICRISAT genebank. Genetic Resources and Crop Evolution, 64 (6). pp. 1365-1381. ISSN 0925-9864
Upadhyaya, H D and Reddy, K N and Pattanashetti, S K and Kumar, V and Ramachandran, S (2017) Identification of promising sources for fodder traits in the world collection of pearl millet at the ICRISAT genebank. Plant Genetic Resources (TSI). pp. 1-10. ISSN 1479-2621
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.). Field Crops Research, 201. pp. 146-161. ISSN 03784290
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea. Functional Plant Biology, 44. pp. 235-252. ISSN 1445-4408
Purushothaman, R and Krishnamurthy, L and Upadhyaya, H D and Vadez, V and Varshney, R K (2016) Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.). Field Crops Research, 197 (-). pp. 10-27. ISSN 03784290
Krishnamurthy, L and Upadhyaya, H D and Kashiwagi, J and Purushothaman, R and Dwivedi, S L and Vadez, V (2016) Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm. Crop and Pasture Science, 67 (8). pp. 834-846. ISSN 1836-0947
Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X
Barkley, N A and Upadhyaya, H D and Liao, B and Holbrook, C C (2016) Global Resources of Genetic Diversity in Peanut. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 67-109. ISBN 9781630670382
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Ahmed, M I (2016) Adaptation Pattern and Genetic Potential of Indian Pearl Millet Named Landraces Conserved at the ICRISAT Genebank. Indian Journal of Plant Genetic Resources, 29 (2). pp. 97-113. ISSN 0971-8184
Dwivedi, S L and Britt, A B and Tripathi, L and Sharma, S and Upadhyaya, H D and Ortiz, R (2015) Haploids: Constraints and opportunities in plant breeding. Biotechnology Advances, 33 (6Part1). pp. 812-829. ISSN 1873-1899
Upadhyaya, H D and Reddy, K N and Ramachandran, S and Kumar, V and Singh, S and Reddy, T M and Ahmed, M I (2015) Status and genetic diversity in pigeonpea germplasm from Caribbean and Central American regions at ICRISAT genebank. Plant Genetic Resources, 13 (03). 01-09. ISSN 1479-263X
Sudini, H and Upadhyaya, H D and Reddy, S V and Naga Mangala, U and Rathore, A and Vijay Krishna Kumar, K (2015) Resistance to late leaf spot and rust diseases in ICRISAT’s mini core collection of peanut (Arachis hypogaea L.). Australasian Plant Pathology, 44 (5). pp. 557-566. ISSN 0815-3191
Lalitha, N and Upadhyaya, H D and Krishnamurthy, L and Kashiwagi, J and Kavi Kishor, P B and Singh, S (2015) Assessing Genetic Variability for Root Traits and Identification of Trait-Specific Germplasm in Chickpea Reference Set. Crop Science, 55 (-). 01-12. ISSN 1435-0653
Lasky, J R and Upadhyaya, H D and Ramu, P and Deshpande, S P and Hash, C T and Bonnette, J and Juenger, T E and Hyma, K and Acharya, C and Mitchell, S E and Buckler, E S and Brenton, Z and Kresovich, S and Morris, G P (2015) Genome-environment associations in sorghum landraces predict adaptive traits. Science Advances, 1 (6). pp. 1-13. ISSN 2375-2548
Westengen, O T and Okongo, M A and Onek, L and Berg, T and Upadhyaya, H D and Birkeland, S and Khalsa, S D K and Ring, K H and Stenseth, N C and Brysting, A K (2014) Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems. Proceedings of the National Academy of Sciences (PNAS), 111 (39). pp. 14100-14105. ISSN 1091-6490
Upadhyaya, H D and Wang, Y H and Sastry, D V S S R and Dwivedi, S L and Prasad, P V V and Burrell, A M and Klein, R R and Morris, G P and Klein, P E (2016) Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions. Genome, 59 (2). pp. 137-145. ISSN 0831-2796
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Kashiwagi, J and Krishnamurthy, L and Purushothaman, R and Upadhyaya, H D and Gaur, P M and Gowda, C L L and Ito, O and Varshney, R K (2015) Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.). Field Crops Research, 170 (-). pp. 47-54. ISSN 1872-6852
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Upadhyaya, H D and Vetriventhan, M and Deshpande, S P and Sivasubramani, S and Wallace, J G and Buckler, E S and Hash, C T and Ramu, P (2015) Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection. Plant Genome, 8 (3). pp. 1-13. ISSN 1940-3372
Jensen, S E and Charles, J R and Muleta, K and Bradbury, P J and Casstevens, T and Deshpande, S P and Gore, M A and Gupta, R and Ilut, D C and Johnson, L and Lozano, R and Miller, Z and Ramu, P and Rathore, A and Romay, M C and Upadhyaya, H D and Varshney, R K and Morris, G P and Pressoir, G and Buckler, E S and Ramstein, G P (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction. The Plant Genome (TSI), 13 (1). pp. 1-15. ISSN 1940-3372
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Upadhyaya, H D and Bhattacharjee, R and Bertioli, D and et al, . (2005) Genotyping Groundnut (Arachis hypogaea) Composite Collection Using SSR Markers. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Dwivedi, S L and Bertioli, D J and Crouch, J H and Valls, J F and Upadhyaya, H D and Favero, A and Moretzsohn, M and Paterson, A H (2007) Peanut.Chapter 3. In: Genome Mapping and Molecular Breeding in Plants. Springer-Verlag, New York, pp. 115-151. ISBN 978-3-540-34387-5
Hamidou, F and Ratnakumar, P and Halilou, O and Mponda, O and Kapewa, T and Monyo, E and Faye, I and Ntare, B R and Nigam, S N and Upadhyaya, H D and Vadez, V (2012) Selection of intermittent drought tolerant lines across years and locations in the reference collection of groundnut (Arachis hypogaea L.). Field Crops Research, 126. pp. 189-199.
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Pattanashetti, S K and Upadhyaya, H D and Motagi, B N and Kanatti, A and Boodi, I and Biradar, B D and Naidu, G K and Chimmad, V P (2015) Genetic Differences for Iron Absorption Efficiency Related Traits in Groundnut. In: 47th Annual Meeting of the American Peanut Research and Education Society (APRES), July 14-16, 2015, Francis Marion Hotel, Charleston, SC, USA.
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic analysis for yield, nutritional and oil quality traits in RIL population of groundnut (Arachis hypogaea L.). Indian Journal of Genetics and Plant Breeding, 74 (4). pp. 450-455. ISSN 0019-5200
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2010) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 121 (05). pp. 971-984. ISSN 1432-2242
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Thudi, M and Upadhyaya, H D and Rathore, A and Gaur, P M and Krishnamurthy, L and Roorkiwal, M and Nayak, S N and Chaturvedi, S K and Basu, P S and Ganga Rao, N V P R and Fikre, A and Kimurto, P and Sharma, P C and Sheshashayee, M S and Tobita, S and Kashiwagi, J and Ito, O and Killian, A and Varshney, R K (2014) Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches. PLoS ONE, 9 (5). e96758. ISSN 1932-6203
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Gopal Reddy, K (2008) Genetics of SCMR AND SLA, the Traits Related To Drought Tolerance in Groundnut (Arachis hypogaea L.). Masters thesis, University of Agricultural Sciences, Bangalore.
Gopal, K and Ravi, K S and Upadhyaya, H D (1993) Evaluation of Soybean Genotypes Against Major Diseases. Plant Protection Bulletin (Faridabad), 45 (4). pp. 17-18. ISSN 0378-0449
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2012) Genetic variability studies in minicore collection of chickpea (Cicer arietinum L.) under different environments. Karnataka Journal of Agricultural Sciences, 25 (3). pp. 305-308. ISSN 0972-1061
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Kajjidoni, S T and Patil, S S (2012) Heterosis in relation to genetic divergence in minicore collections of Chickpea (Cicer arietinum L.). Indian Journal of Genetics and Plant Breeding , 72 (3). pp. 303-308. ISSN 0975-6906
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Upadhyaya, H D and Mukri, G and Nadaf, H L and Singh, Sube (2012) Variability and Stability Analysis for Nutritional Traits in the Mini Core Collection of Peanut. Crop Science, 52 (1). pp. 168-178. ISSN 0011-183X
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2011) Genetic Divergence under Three Environments in a Minicore Collection of Chickpea (Cicer arietinum L.). Indian Journal of Plant Genetic Resources, 24 (2). pp. 177-185. ISSN 0971-8184
Parameshwarappa, S G and Salimath, P M and Upadhyaya, H D and Patil, S S and Kajjidoni, S T (2011) Genetic Variability Studies in Minicore Collections of Chickpea (Cicer arietinum L.) under Different Environments. Indian Journal of Plant Genetic Resources, 24 (1). pp. 43-48. ISSN 0976-1926
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Dwivedi, S L and Nadaf, H L and Singh, Sube (2011) Phenotypic diversity and identification of wild Arachis accessions with useful agronomic and nutritional traits. Euphytica, 82 (1). pp. 103-115. ISSN 0014-2336
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2011) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 121 (5). pp. 971-984.
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Khedikar, Y P and Patgar, K V and Gowda, M C V and Upadhyaya, H D and Varshney, R K (2008) Construction of a genetic linkage map and QTL analysis for late leaf spot and rust in groundnut (Arachis hypogaea L.). In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Gowda, M V C and Khedikar, Y P and Kusuma, V P and Sujay, V and Bhat, S and Upadhyaya, H D and Varshney, R K (2008) Genetic enhancement of resistance to foliar diseases. In: Third International Conference of the Peanut Research Community On Advances in Arachis through Genomics and Biotechnology (AAGB – 2008), 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Khedikar, Y P (2008) Molecular tagging and mapping of resistance to late leaf spot and rust in groundnut (Arachis hypogaea L.). PHD thesis, University of Agricultural Sciences.
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Upadhyaya, H D and Salimath, P M and Gowda, C L L and Singh, Sube (2007) New early-maturing germplasm lines for utilization in chickpea improvement. Euphytica, 157 (1-2). pp. 195-208.
Swamy, B P M and Upadhyaya, H D and Goudar, P V K (2006) Characterization of Asian core-collection of groundnut for morphological traits. Indian Journal of Crop Science, 1 (1-2). pp. 129-134. ISSN 0973-4880
Upadhyaya, H D and Swamy, B P M and Goudar, P V K and Kullaiswamy, B Y and Singh, Sube (2005) Identification of diverse groundnut germplasm through multienvironment evaluation of a core collection for Asia. Field Crops Research, 93 (2-3). pp. 293-299. ISSN 0378-4290
Gadag, R N and Upadhyaya, H D (1995) Heterosis in soybean (Glycine max (L.) Merrill). Indian Journal of Genetics and Plant Breeding, 55 (3). pp. 308-314. ISSN 0019-5200
Upadhyaya, H D and Gopal, K (1995) Inheritance of albinism in certain crosses of groundnut (Arachis hypogaea L.). Journal of Oilseeds Research, 12 (2). pp. 167-170. ISSN 0970-2776
Upadhyaya, H D and Gopal, K and Nadaf, H L and Vijayakumar, S (1992) Combining ability studies for yield and its components in groundnut. Indian Journal of Genetics and Plant Breeding, 52 (1). pp. 1-6. ISSN 0019-5200
Gadag, R N and Upadhyaya, H D and Goud, J V (1990) Studies on Harvest Index in Soybean. Legume Research, 13 (4). pp. 193-196. ISSN 0976-0571
Upadhyaya, H D (1985) Induced genetic variability for oil content in soybean. Journal of Nuclear Agriculture and Biology, 14 (3). pp. 119-120. ISSN 0379-5489
Swamy, B P M and Upadhyaya, H D and Goudar, P V K and Kullaiswamy, B Y and Singh, S (2003) Phenotypic variation for agronomic characteristics in a groundnut core collection for Asia. Field Crops Research, 84 (3). pp. 359-371.
Gopal, K and Ravi, K S and Upadhyaya, H D (1993) Evaluation of Soybean Genotypes Against Major Diseases. Plant Protection Bulletin (Faridabad), 45 (4). pp. 17-18. ISSN 0378-0449
Vijayakumar, S and Gopal, K and Ravikumar, R L and Upadhyaya, H D (1993) Induced Mutation for higher yield in Groundnut(Arachis hypogae). Indian Journal of Agricultural Sciences, 63 (11). pp. 716-718. ISSN 0019-5022
Mukri, G and Nadaf, H L and Gowda, M V C and Bhat, R S and Upadhyaya, H D (2014) Genetic analysis for yield, nutritional and oil quality traits in RIL population of groundnut (Arachis hypogaea L.). Indian Journal of Genetics and Plant Breeding, 74 (4). pp. 450-455. ISSN 0019-5200
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Motagi, B N and Ajeigbe, H A and Echekwu, C and Mohammed, S G and Adnan, A A and Omoigui, L O and Desmae, H M and Monyo, E and Okori, P and Janila, P and Upadhyaya, H D and Varshney, R K and Tabo, R (2015) Evaluation of multiple stress tolerant groundnut genotypes for productivity and nutritional quality in Nigeria. In: Proceedings of the 8th International Conference of the Peanut Research Community-Advances in Arachis through Genomics and Biotechnology (AAGB-2015), November 4 - 7, 2015, Brisbane, Australia.
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Kassa, M T and Penmetsa, R V and Carrasquilla-Garcia, N and et al, . (2012) Genetic Patterns of Domestication in Pigeonpea (Cajanus cajan (L.) Millsp.) and Wild Cajanus Relatives. PLoS ONE, 7 (6). pp. 1-13. ISSN 1932-6203
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Pandey, M K and Monyo, E and Ozias-Akins, P and Liang, X and Guimaraes, P and Nigam, S N and Upadhyaya, H D and Janila, P and Zhang, X and Guo, B and Cook, D R and Bertioli, D J and Michelmore, R and Varshney, R K (2012) Advances in Arachis genomics for peanut improvement. Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Pandey, M K and Gautami, B and Jayakumar, T and Sriswathi, M and Upadhyaya, H D and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Cook, D R and Varshney, R K (2012) Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding, 131 (1). pp. 139-147. ISSN 1439-0523
Saxena, R K and Penmetsa, R V and Upadhyaya, H D and Kumar, Ashish and Varshney, R K and et al, . (2012) Large-Scale Development of Cost-Effective Single-Nucleotide Polymorphism Marker Assays for Genetic Mapping in Pigeonpea and Comparative Mapping in Legumes. DNA Research. pp. 1-13. ISSN 1756-1663
Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Gowda, C L L and Serraj, R and Srinivasan, G and Chauhan, Y S and Reddy, B V S and Rai, K N and Nigam, S N and Gaur, P M and Reddy, L J and Dwivedi, S L and Upadhyaya, H D and Zaidi, P H and Rai, H K and Maniselvan, P and Follkerstma, R and Mallikarjuna, N (2009) Opportunities for improving crop water productivity through genetic enhancement of dryland crops. In: Rainfed agriculture: unlocking the potential. Comprehensive Assessment of Water Management in Agriculture Series (7). CAB Inernational, Wallingford, Oxon, UK, pp. 133-163. ISBN 978-1-84593-389-0
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 0032-0889
Thakro, V and Malik, N and Basu, U and Srivastava, R and Narnoliya, L and Daware, A and Varshney, N and Mohanty, J K and Bajaj, D and Dwivedi, V and Tripathi, S and Jha, U C and Dixit, G P and Singh, A K and Tyagi, A K and Upadhyaya, H D and Parida, S K (2022) A superior gene allele involved in abscisic acid signaling enhances drought tolerance and yield in chickpea. Plant Physiology, 191 (3). pp. 1884-1912. ISSN 1532-2548
Upadhyaya, H D and Dwivedi, S L and Ambrose, M and Ellis, N and Berger, J and Smykal, P and Debouck, D and Duc, G and Dumet, D and Flavell, A and Sharma, S K and Mallikarjuna, N and Gowda, C L L (2011) Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica, 180 (1). pp. 27-47.
Roorkiwal, M and Nayak, S N and Thudi, M and Upadhyaya, H D and Brunel, D and Mournet, P and This, D and Sharma, P C and Varshney, R K (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers. Frontiers in Plant Science, 5 (248). pp. 1-11. ISSN 1664-462X
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Thudi, M and Bohra, A and Nayak, S N and Varghese, N and Shah, T M and Penmetsa, R V and Thirunavukkarasu, N and Gudipati, S and Gaur, P M and Kulwal, P L and Upadhyaya, H D and Kavi Kishor, P B and Winter, P and Kahl, G and Town, C D and Kilian, A and Cook, D R and Varshney, R K (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.). PLoS ONE, 6 (11). pp. 1-12. ISSN 1932-6203
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Vetriventhan, M and Upadhyaya, H D and Deshpande, S P and Johnson, M S and Wallace, J G and Victor, A and Naresh, D and Rayaprolu, L and Singh, K and Mayes, S (2024) Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.). Scientific Reports (TSI), 14. pp. 1-17. ISSN 2045-2322
Ambika, - and Aski, M S and Gayacharan, - and Hamwieh, A and Talukdar, A and Gupta, A K and Sharma, B B and Joshi, R and Upadhyaya, H D and Singh, K and Kumar, R (2022) Unraveling Origin, History, Genetics, and Strategies for Accelerated Domestication and Diversification of Food Legumes. Frontiers in Genetics (TSI), 13. pp. 1-21. ISSN 1664-8021
Singh, R K and Singh, C and Ambika, - and Chandana, B S and Mahto, R K and Patial, R and Gupta, A and Gahlaut, V and Gayacharan, - and Hamwieh, A and Upadhyaya, H D and Kumar, R (2022) Exploring Chickpea Germplasm Diversity for Broadening the Genetic Base Utilizing Genomic Resourses. Frontiers in Genetics (TSI), 13. pp. 1-26. ISSN 1664-8021
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Pande, S and Rao, J N and Upadhyaya, H D and Lenne, J M (2001) Farmers' participatory integrated management of foliar diseases of groundnut. International Journal of Pest Management, 47 (2). pp. 121-126. ISSN 0967-0874
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Varshney, R K and Parzies, H K (2014) Population structure and linkage disequilibrium of ICRISAT foxtail millet (Setaria italica (L.) P. Beauv.) core collection. Euphytica, 196 (3). pp. 423-435. ISSN 1573-5060
Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Parzies, H K and Bharathi, A and Varshney, R K and Gowda, C L L (2012) Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection. Plant Genetic Resources, 10 (3). pp. 214-223. ISSN 1479-2621
Upadhyaya, H D and Ramesh, S and Sharma, S and Singh, S K and Varshney, R K and Sarma, N D R K and Ravishankar, C R and Narasimhudu, Y and Reddy, V G and Sahrawat, K L and Dhanalakshmi, T N and Mgonja, M A and Parzies, H K and Gowda, C L L and Singh, Sube (2011) Genetic diversity for grain nutrients contents in a core collection of finger millet (Eleusine coracana (L.) Gaertn.) germplasm. Field Crops Research, 121. pp. 42-52. ISSN 0378-4290
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Wang, L and Prakash, C S and Liu, Y and Gao, L and Meng, R and Seetharam, K and Gowda, C L L and Ganesamurthy, K and Singh, S K and Kumar, R and Li, J and Wang, Y (2022) Genome-wide association mapping identifies an SNF4 ortholog that impacts biomass and sugar yield in sorghum and sugarcane. Journal of Experimental Botany, 73 (11). pp. 3584-3596. ISSN 1460-2431
Upadhyaya, H D and Wang, Y-H and Sharma, R and Sharma, S (2013) Identification of genetic markers linked to anthracnose resistance in sorghum using association analysis. Theoretical and Applied Genetics, 126 (6). pp. 1649-1657. ISSN 0040-5752
Wang, Y and Bible, P and Loganantharaj, R and Upadhyaya, H D (2012) Identification of SSR markers associated with height using pool-based genome-wide association mapping in sorghum. Molecular Breeding, 30 (1). pp. 281-292. ISSN 1572-9788
Upadhyaya, H D and Wang, Y H and Gowda, C L L and Sharma, S (2013) Association mapping of maturity and plant height using SNP markers with the sorghum mini core collection. TAG Theoretical and Applied Genetics, 126 (8). pp. 2003-2015. ISSN 1432-2242
Wang, Y H and Upadhyaya, H D and Burrell, A M and Sahraeian, S M E and Klein, R R and Klein, P E (2013) Genetic Structure and Linkage Disequilibrium in a Diverse, Representative Collection of the C4 Model Plant, Sorghum bicolor. G3.Genes Genomes Genetics, 3 (5). pp. 783-793. ISSN 2160-1836
Upadhyaya, H D and Wang, Y-H. and Sharma, S and Singh, Sube (2012) Association mapping of height and maturity across five environments using the sorghum mini core collection. Genome. 34 pp.. ISSN 1480-3321
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Dwivedi, S L and Upadhyaya, H D and Senthilvel, S and Hash, C T and Fukunaga, K and Diao, X and Santra, D and Baltensperge, D and Prasad, M (2012) Millets: Genetic and Genomic Resources. In: Plant Breeding Reviews. Wiley-Blackwell, Hoboken, New Jersey, pp. 247-375. ISBN 9781118100509
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Nayyar, H and Singh, S and Kaur, S and Kumar, S and Upadhyaya, H D (2006) Differential Sensitivity of Macrocarpa and Microcarpa Types of Chickpea (Cicer arietinum L.) to Water Stress: Association of Contrasting Stress Response with Oxidative Injury. Journal of Integrative Plant Biology, 48 (11). pp. 1318-1329. ISSN 1744-7909
Nayyar, H and Kaur, S and Singh, Smita and Upadhyaya, H D (2006) Differential sensitivity of Desi (small-seeded) and Kabuli (large-seeded) chickpea genotypes to water stress during seed filling: effects on accumulation of seed reserves and yield. Journal of the Science of Food and Agriculture, 86 (13). pp. 2076-2082. ISSN 0022-5142
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Nigam, S N and Waliyar, F and Aruna, R and Reddy, S V and Kumar, P L and Craufurd, P Q and Diallo, A T and Ntare, B R and Upadhyaya, H D (2009) Breeding peanut for resistance to aflatoxin contamination at ICRISAT. Peanut Science, 36 (4). pp. 42-49. ISSN 0095-3679
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Song, C and Saxena, R K and Azam, S and Yu, S and Sharpe, A G and Cannon, S and Baek, J and Rosen, B D and Tar'an, B and Millan, T and Zhang, X and Ramsay, L D and Iwata, A and Wang, Y and Nelson, W and Farmer, A D and Gaur, P M and Soderlund, C and Penmetsa, R V and Xu, C and Bharathi, A K and He, W and Winter, P and Zhao, S and Hane, J K and Carrasquilla-Garcia, N and Condie, J A and Upadhyaya, H D and Luo, M and Thudi, M and Gowda, C L L and Singh, N P and Lichtenzveig, J and Gali, K K and Rubio, J and Nadarajan, N and Dolezel, J and Bansal, K C and Xu, X and Edwards, D. and Zhang, G and Kahl, G and Gil, J and Singh, K B and Datta, S K and Jackson, S A and Wang, J and Cook, D R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31. pp. 240-246. ISSN 1546-1696
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Dwivedi, S and Upadhyaya, H D and Subudhi, P and Gehring, C and Bajic, V and Ortiz, R (2010) Enhancing Abiotic Stress Tolerance in Cereals Through Breeding and Transgenic Interventions. Plant Breeding Reviews, 33. pp. 31-114.
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Divakara, B N and Upadhyaya, H D and Fandohan, B (2012) Identification and divergence studies of genotypes of Tamarindus indica (Fabaceae) with superior pod traits. International Journal of Biological and Chemical Sciences. pp. 1-19. (In Press)
Manju, Y and Kumar, Y Y and Pushpendra, K and Kumar, S R and Renu, Y and Pawan, K and Shaily, J and Mahesh, R and Neelam, Y and Upadhyaya, H D and Rajendra, K (2017) Molecular Diversity Analysis as An Improvement Tool for Pigeonpea [Cajanus Cajan (L.)]. Research Journal of Biotechnology, 12 (9). ISSN 0973-6263
Yadava, Y K and Singh, R K and Kumar, P and Kumar, P and Yadav, M K and Barh, A and Upadhyaya, H D and Kumar, R (2018) Assay of Genetic Architecture for Identification of Waterlogging Tolerant Pigeonpea Germplasm. National Academy Science Letters (TSI), 41 (1). pp. 11-14. ISSN 0250-541X
Nirgude, M and Kalyana Babu, B and Shambhavi, Y and Singh, U M and Upadhyaya, H D and Anil Kumar, . (2014) Development and molecular characterization of genic molecular markers for grain protein and calcium content in finger millet (Eleusine coracana (L.) Gaertn.). Molecular Biology Reports, 41 (3). pp. 1189-1200. ISSN 1573-4978
Redden, R J and Furman, B J and Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Coyne, C J and Enneking, D (2007) Biodiversity Management in Chickpea. In: Chickpea Breeding and Management. CAB International Publishing, Wallingford Oxfordshire, UK, pp. 355-358. ISBN 978-1-84593-213-8
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Varshney, R K and Saxena, R K and Upadhyaya, H D and Khan, A W and Yu, Y and Kim, C and Rathore, A and Kim, D and Kim, J and An, S and Kumar, V and Anuradha, G and Yamini, K N and Zhang, W and Muniswamy, S and Kim, J S and Penmetsa, R V and von Wettberg, E and Datta, S K (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics. pp. 1-9. ISSN 1061-4036
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Sood, S and Khulbe, R K and Gupta, A K and Agrawal, P K and Upadhyaya, H D and Bhatt, J C (2015) Barnyard millet – a potential food and feed crop of future. Plant Breeding, 134 (2). pp. 135-147. ISSN 0179-9541
Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Khoury, C K and Castañeda-Alvarez, N P and Achicanoy, H A and Sosa, C C and Bernau, V and Kassa, M T and Norton, S L and Van Der Maesen, L J G and Upadhyaya, H D and Ramírez-Villegas, J and Jarvis, A and Struik, P C (2015) Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance. Biological Conservation, 184. pp. 259-270. ISSN 0006-3207
Dwivedi, S L and Lammerts van Bueren, E T and Ceccarelli, S and Grando, S and Upadhyaya, H D and Ortiz, R (2017) Diversifying Food Systems in the Pursuit of Sustainable Food Production and Healthy Diets. Trends in Plant Science, 22 (10). pp. 842-856. ISSN 13601385
Vetriventhan, M and Upadhyaya, H D and Deshpande, S P and Johnson, M S and Wallace, J G and Victor, A and Naresh, D and Rayaprolu, L and Singh, K and Mayes, S (2024) Genome-wide assessment of population structure and association mapping for agronomic and grain nutritional traits in proso millet (Panicum miliaceum L.). Scientific Reports (TSI), 14. pp. 1-17. ISSN 2045-2322
Challinor, A J and Wheeler, T and Hemming, D and Upadhyaya, H D (2009) Ensemble yield simulations: crop and climate uncertainties, sensitivity to temperature and genotypic adaptation to climate change. Climate Research (CR), 38 (2). pp. 117-127. ISSN 0936-577X
Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Redden, R J and Furman, B J and Upadhyaya, H D and Pundir, R P S and Gowda, C L L and Coyne, C J and Enneking, D (2007) Biodiversity Management in Chickpea. In: Chickpea Breeding and Management. CAB International Publishing, Wallingford Oxfordshire, UK, pp. 355-358. ISBN 978-1-84593-213-8
Yol, E and Furat, S and Upadhyaya, H D and Uzun, B (2017) Characterization of groundnut (Arachis hypogaea L.) collection using quantitative and qualitative traits in the Mediterranean Basin. Journal of Integrative Agriculture, 16. pp. 1-12. ISSN 2095-3119
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
Upadhyaya, H D and Ravishankar, C R and Narasimhudu, Y and Sarma, N D R K and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Parzies, H K and Dwivedi, S L and Nadaf, H L and Sahrawat, K L and Gowda, C L L (2011) Identification of trait-specific germplasm and developing a mini core collection for efficient use of foxtail millet genetic resources in crop improvement. Field Crops Research, 124 (3). pp. 459-467.
Upadhyaya, H D and Sarma, N D R K and Ravishankar, C R and Albrecht, T and Narasimhudu, Y and Singh, S K and Varshney, S K and Reddy, V G and Singh, Sube and Dwivedi, S L and Wanyera, N and Oduori, C O A and Mgonja, M A and Kisandu, D B and Parzies, H K and Gowda, C L L (2010) Developing a Mini-Core Collection in Finger Millet Using Multilocation Data. Crop Science, 50 (5). pp. 1924-1931. ISSN 1435-0653
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