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Number of items: 154.

A

Almekinders, C J M and Beumer, K and Hauser, M and Misiko, M and Gatto, M and Nkurumwa, A O and Erenstein, O (2019) Understanding the relations between farmers’ seed demand and research methods: The challenge to do better. Outlook on Agriculture (TSI), 48 (1). pp. 16-21. ISSN 0030-7270

Arnaud, E and Laporte, M A and Kim, S and Aubert, C and Leonelli, S and Miro, B and Cooper, L and Jaiswal, P and Kruseman, G and Shrestha, R and Buttigieg, P L and Mungall, C J and Pietragalla, J and Agbona, A and Muliro, J and Detras, J and Hualla, V and Rathore, A and Das, R R and Dieng, I and Bauchet, G and Menda, N and Pommier, C and Shaw, F and Lyon, D and Mwanzia, L and Juarez, H and Bonaiuti, E and Chiputwa, B and Obileye, O and Auzoux, S and Yeumo, E D and Mueller, L A and Silverstein, K and Lafargue, A and Antezana, E and Devare, M and King, B (2020) The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. Patterns, 1 (7). p. 100105. ISSN 2666-3899

B

Balaji, J and Crouch, J H and Petite, P V N S and Hoisington, D A (2006) A database of annotated tentative orthologs from crop abiotic stress transcripts. Bioinformation, 1 (6). pp. 225-227.

Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.

Bandyopadhyay, T and Swarbreck, S M and Jaiswal, V and Maurya, J and Gupta, R and Bentley, A R and Griffiths, H and Prasad, M (2022) GWAS identifies genetic loci underlying nitrogen responsiveness in the climate resilient C4 model Setaria italica (L.). Journal of Advanced Research, 42. pp. 249-261. ISSN 2090-1224

Bhattacharya, J and Reddy, D S and Prasad, K and Nitnavare, R B and Bhatnagar-Mathur, P and Reddy, P S (2023) Ectopic expression of pigeonpea Orf147 gene imparts partial sterility in Cicer arietinum. Gene, 868. pp. 1-7. ISSN 0378-1119

Bohorova, N and Frutos, R and Royer, M and Estanol, P and Pacheco, M and Rascón, Q and McLean, S and Hoisington, D A (2001) Novel synthetic Bacillus thuringiensiscry1B gene and the cry1B-cry1Ab translational fusion confer resistance to southwestern corn borer, sugarcane borer and fall armyworm in transgenic tropical maize. TAG Theoretical and Applied Genetics, 103 (3-4). pp. 817-826. ISSN 1432-2242

Bohorova, N and Zhang, W and Julstrum, P and McLean, S and Luna, M and Brito, R M and Diaz, L and Ramos, M E and Estanol, P and Pacheco, M and Salgado, M and Hoisington, D A (1999) Production of transgenic tropical maize with cryIAb and cryIAc genes via microprojectile bombardment of immature embryos. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 437-444. ISSN 1432-2242

Bohra, A and Dubey, A and Saxena, R K and Penmetsa, R V and Poornima, K N and Kumar, N and Farmer, A D and Srivani, G and Upadhyaya, H D and Gothalwal, R and Ramesh, S and Singh, D and Saxena, K B and Kishor, P B K and Singh, N K and Town, C D and May, G D and Cook, D R and Varshney, R K (2011) Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology, 11 (56). pp. 1-15. ISSN 1471-2229

Bohra, A and Mallikarjuna, N and Saxena, K B and Upadhyaya, H D and Vales, I and Varshney, R K (2010) Harnessing the Potential of Crop Wild Relatives through Genomics Tools for Pigeonpea Improvement. Journal of Plant Biology, 37 (1). pp. 83-98.

Brito, R M and Velazquez, L and Noguera, L M and Pfeiffer, W and McLean, S and Hoisington, D A (2002) The effect of pretreatment with mild heat and drought stresses on the explant and biolistic transformation frequency of three durum wheat cultivars. Plant Cell Reports, 20 (10). pp. 955-960. ISSN 1432-203X

Buhariwalla, H K and Jarret, R L and Jayashree, B and Crouch, J H and Ortiz, R (2005) Isolation and characterization of microsatellite markers from Musa balbisiana. Molecular Ecology Notes, 5 (2). pp. 327-330. ISSN 1471-8278

Buhariwalla, H K and Jayashree, B and Eshwar, K and Crouch, J H (2005) Development of ESTs from chickpea roots and their use in diversity analysis of the Cicergenus. BMC Plant Biology, 5 (16). 01-14. ISSN 14712229

Buhariwalla, H K and Srilakshmi, P and Kannan, S and Kanchi, R S and Chndra, S and Satyaprasad, K and Waliyar, F and Thakur, R P and Crouch, J H (2005) AFLP Analysis of Trichoderma spp. from India Compared with Sequence and Morphological-based Diagnostics. Journal Of Phytopathology, 153 (7-8). pp. 389-400. ISSN 1439-0434

C

Chichaybelu, M and Eshete, M and Korbu, L and Mohammed, R and Girma, N and Bekele, D and Geleta, T and Fikre, A and Ganga Rao, N V P R and Ojiewo, C O and Monyo, E and Gaur, P M and Varshney, R K (2017) Advances in chickpea crop improvement for improved productivity and resilient cropping systems in Ethiopia. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Crossa, J and Pérez-Rodríguez, P and Cuevas, J and Montesinos-López, O and Jarquín, D and de los Campos, G and Burgueño, J and González-Camacho, J M and Pérez-Elizalde, S and Beyene, Y and Dreisigacker, S and Singh, R and Zhang, X and Gowda, M and Roorkiwal, M and Rutkoski, J and Varshney, R K (2017) Genomic Selection in Plant Breeding: Methods, Models, and Perspectives. Trends in Plant Science, 22 (11). pp. 961-975. ISSN 13601385

Crossa, J and Vargas, M and Eeuwijk, F A van and Jiang, C and Edmeades, G O and Hoisington, D A (1999) Interpreting genotype × environment interaction in tropical maize using linked molecular markers and environmental covariables. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 611-625. ISSN 1432-2242

Cuc, L M and Mace, E S and Crouch, J H and Quang, V D and Long, T D and Varshney, R K (2008) Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea). BMC Plant Biology, 8 (55). pp. 1-11.

D

Devare, M and Zandstra, M and Clobridge, A and Fotsy, M and Abreu, D and Arnaud, E and Baraka, P and Bonaiuti, E and Chukka, S and Dieng, I and Dreher, K and Erlita, S and Juarez, H and Kim, S and Koo, J and Muchlish, U and Müller, M and Mwanzia, L and Poole, J and Siddiqui, S (2017) Open Access and Open Data at CGIAR: Challenges and Solutions. Knowledge Management for Development Journal, 13 (2). pp. 6-21. ISSN 1947-4199

Dixon, J M and Weerahewa, J and Hellin, J and Rola-Rubzen, M F and Huang, J and Shalander, K and Das, A and Qureshi, M E and Krupnik, T J and Shideed, K and Jat, M L and Prasad, P V V and Yadav, S and Irshad, A and Asanaliev, A and Abugalieva, A and Karimov, A and Bhattarai, B and Balgos, C Q and Benu, F and Ehara, H and Pant, J and Sarmiento, J M P and Newby, J C and Pretty, J and Tokuda, H and Weyerhaeuser, H and Digal, L N and Li, L and Sarkar, M A R and Abedin, M Z and Schreinemachers, P and Grafton, Q and Sharma, R C and Saidzoda, S and Lopez-Ridaura, S and Coffey, S and Kam, S P and Win, S S and Praneetvatakul, S and Maraseni, T and Touch, V and Liang, W and Saharawat, Y S and Timsina, J (2021) Response and resilience of Asian agrifood systems to COVID-19: An assessment across twenty-five countries and four regional farming and food systems. Agricultural Systems (TSI), 193. pp. 1-19. ISSN 0308-521X

Dreisigacker, S and et al, . (2005) Hybrid performance and heterosis in spring bread wheat, and their relations to SSR-based genetic distances and coefficients of parentage. Euphytica, 144 (1-2). pp. 51-59. ISSN 1573-5060

Dreisigacker, S and et al, . (2004) SSR and Pedigree Analyses of Genetic Diversity among CIMMYT Wheat Lines Targeted to Different Megaenvironments. Crop Science, 44 (2). pp. 381-388. ISSN 0011-183X

Dubey, A and Farmer, A and Schlueter, J and Cannon, S B and Abernathy, B and Tuteja, R and Woodward, J and Shah, T and Mulasmanovic, B and Kudapa, H and Raju, N L and Gothalwal, R and Pande, S and Xiao, Y and Town, C D and Singh, N K and May, G D and Jackson, S and Varshney, R K (2011) Defining the transcriptome assembly and its use for genome dynamics and transcriptome profiling studies in pigeonpea (Cajanus cajan L.). DNA Research, 18 (3). pp. 153-164. ISSN 1340-2838, 1756-1663

Dwivedi, S and Perotti, E and Ortiz, R (2008) Towards molecular breeding of reproductive traits in cereal crops. Plant Biotechnology Journal, 6 (6). pp. 529-559. ISSN 1467-7652

Dwivedi, S and Upadhyaya, H D and Subudhi, P and Gehring, C and Bajic, V and Ortiz, R (2010) Enhancing Abiotic Stress Tolerance in Cereals Through Breeding and Transgenic Interventions. Plant Breeding Reviews, 33. pp. 31-114.

Dwivedi, S L and Upadhyaya, H D and Balaji, J and Buhariwalla, H K and Blair, M W and Ortiz, R and Crouch, J H and Serraj, R (2006) Using Genomics to Exploit Grain Legume Biodiversity in Crop Improvement. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 171-358. ISBN 978-0-471-73215-0

Dwivedi, S L and Upadhyaya, H D and Chung, I M and De Vita, P and García-Lara, S and Guajardo-Flores, D and Gutiérrez-Uribe, J A and Serna-Saldívar, S O and Rajakumar, G and Sahrawat, K L and Kumar, J and Ortiz, R (2016) Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes. Frontiers in Plant Science, 07 (763). 01-27. ISSN 1664-462X

Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523

E

Elias, M and Mudege, N and Lopez, D E and Najjar, D and Kandiwa, V and Luis, J and Yila, J and Tegbaru, A and Ibrahim, G and Badstue, L and Njuguna, E M and Bentaibi, A (2018) Gendered aspirations and occupations among rural youth, in agriculture and beyond: A cross-regional perspective. Journal of Gender, Agriculture and Food Security, 3 (1). pp. 82-107. ISSN 2413-922X

F

Farkhari, Md and et al, . (2011) Recombination frequency variation in maize as revealed by genomewide single-nucleotide polymorphisms. Plant Breeding, 130 (5). pp. 533-539. ISSN 1439-0523

Fedoroff, N V and Battisti, D S and Beachy, R N and Cooper, P J M and et al, . (2010) Radically Rethinking Agriculture for the 21st Century. Science, 327 (5967). pp. 833-834. ISSN 0036-8075

Ferrara, G O and Mosaad, M G and Mahalakshmi, V and Rajaram, S (1998) Photoperiod and vernalisation response of Mediterranean wheats, and implications for adaptation. Euphytica, 100 (1-3). pp. 377-384. ISSN 0014-2336

Fischer, R A and Bidinger, F R and Syme, J R and Wall, P C (1981) Leaf photosynthesis, leaf permeability, crop growth, and yield of short spring wheat genotypes under irrigation. Crop Science, 21 (3). pp. 367-373. ISSN 0011-183X

Flowers, T J and Gaur, P M and Gowda, C L L and Krishnamurthy, L and Samineni, S and Siddique, K H M and Turner, N C and Vadez, V and Varshney, R K and Colmer, T D (2010) Salt sensitivity in chickpea. Plant, Cell and Environment , 33 (4). pp. 490-509. ISSN 0140-7791

Franco, J and Crossa, J and Desphande, S (2010) Hierarchical multiple-factor analysis for classifying genotypes based on phenotypic and genetic data. Crop Science, 50 (1). pp. 105-117.

G

Gassner, A and Alvare, L M and Bamba, Z and Beare, D and Bernardo, M and Biradar, C and Brakel, M V and Chapman, R and Dileepkumar, G and Dieng, I and Erlita, S and Fulss, R and Poole, J and Kshatriya, M and Selim, G and Simon, R and Sonder, K and Prasai, N and Garruccio, M and Rivas, S S and Rajasekharan, M and Srinivasa Rao, CH (2013) Shifting the goal post - from high impact journals to high impact data. CGIAR.

Gautami, B and Ravi, K and Narasu, M L and Hoisington, D A and Varshney, R K (2009) Novel set of groundnut SSR markers for germplasm analysis and interspecific transferability. International Journal of Integrative Biology, 7 (2). pp. 100-106.

George, M L and et al, . (2004) Genetic diversity of maize inbred lines in relation to downy mildew. Euphytica, 135 (2). pp. 145-155. ISSN 1573-5060

George, M L C and Prasanna, B M P and Rathore, R S and Setty, T A S and Kasim, F and Azrai, M and Vasal, S and Balla, O and Hautea, D and Canama, A and Regalado, E and Vargas, M and Khairallah, M and Jeffers, D and Hoisington, D A (2003) Identification of QTLs conferring resistance to downy mildews of maize in Asia. TAG Theoretical and Applied Genetics, 107 (3). pp. 544-551. ISSN 1432-2242

George, M L C and Regalado, E and Li, W and Cao, M and Dahlan, M and Pabendon, M and Warburton, M L and Xianchun, X and Hoisington, D A (2003) Molecular characterization of Asian maize inbred lines by multiple laboratories. TAG Theoretical and Applied Genetics, 109 (1). pp. 80-91. ISSN 1432-2242

Glaszmann, J C and Kilian, B and Upadhyaya, H D and Varshney, R K (2010) Accessing genetic diversity for crop improvement. Current Opinion in Plant Biology, 13 (2). pp. 167-173. ISSN 1369-5266

Gnanesh, B N and Bohra, A and Sharma, M and Byregowda, M and Pandey, S and Wesley, V and Saxena, R K and Saxena, K B and Kavi Kishor, P B and Varshney, R K (2011) Genetic mapping and quantitative trait locus analysis of resistance to sterility mosaic disease in pigeonpea [Cajanus cajan (L.) Millsp.]. Field Crops Research, 123. pp. 53-61.

Govindaraj, M and Rai, K N and Kanatti, A and Velu, G and Shivade, H (2015) Breeding high-iron pearl millet cultivars: present status and future prospects. In: 2nd International Conference on " Global Food Security", October 11-14, 2015, Ithaca, NY, USA. (Submitted)

Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242

Gurney, A L and et al, . (2003) Novel sources of resistance to Striga hermonthica in Tripsacum dactyloides, a wild relative of maize. New Phytologist, 160 (3). pp. 557-568. ISSN 1469-8137

H

Halewood, M and Jamora, N and Noriega, I and Anglin, N and Wenzl, P and Payne, T and Ndjiondjop, M N and Guarino, L and Kumar, P and Yazbek, M and Muchugi, A and Azevedo, V and Tchamba, M and Jones, C and Venuprasad, R and Roux, N and Rojas, E and Lusty, C (2020) Germplasm Acquisition and Distribution by CGIAR Genebanks. Plants, 9 (10). pp. 1-29. ISSN 2223-7747

Hay, F R and Hamilton, N R S and Furman, B J and Upadhyaya, H D and Reddy, K N and Singh, S K (2013) Cereals. In: Conservation of Tropical Plant Species. Springer, New York, pp. 293-315. ISBN 978-1-4614-3776-5

Hiremath, P J and Farmer, A and Cannon, S B and Woodward, J and Kudapa, H and Tuteja, R and Kumar, A and Bhanuprakash, A and Mulaosmanovic, B and Gujaria, N and Krishnamurthy, L and Gaur, P M and Kavi Kishor, P B and Shah, T and Srinivasan, R and Lohse, M and Xiao, Y and Town, C D and Cook, D R and May, G D and Varshney, R K (2011) Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnology Journal, 9. pp. 922-931.

Hoisington, D A and Bohorova, N and Fennell, S and Khairallah, M and Pellegrineschi, A and Ribaut, J M (2002) The application of biotechnology to wheat improvement. In: Bread Wheat Improvement and Production. FAO Plant Production and Protection Series (30). Food and Agriculture Organization of the United Nations., pp. 175-198. ISBN 92-5-104809-6

Hoisington, D A and Khairallah, M and Reeves, T and Ribaut, J M and Skovmand, B and Taba, S and Warburton, M (1999) Plant genetic resources: What can they contribute toward increased crop productivity? Proceedings of the National Academy of Sciences, 96 (11). pp. 5937-5943. ISSN 1091-6490

Hoisington, D A and Ortiz, R (2008) Research and field monitoring on transgenic crops by the Centro Internacional de Mejoramiento de Maíz y Trigo (CIMMYT). Euphytica, 164 (3). pp. 893-902.

Hyman, G and Espinosa, H and Camargo, P and Abreu, D and Devare, M and Arnaud, E and Porter, C and Mwanzia, L and Sonder, K and Traore, S (2017) Improving agricultural knowledge management: The AgTrials experience. F1000Research, 6 (317). pp. 1-13. ISSN 2046-1402

I

Inagaki, M N and Hash, C T (1998) Production of haploids in bread wheat, durum wheat and hexaploid triticale crossed with pearl millet. Plant Breeding, 117 (5). pp. 485-487. ISSN 1439-0523

J

Jagadish, S V K and Cairns, J E and Kumar, Arvind and Somayanda, I M and Craufurd, P Q (2011) Does susceptibility to heat stress confound screening for drought tolerance in rice? Functional Plant Biology, 38 (4). pp. 261-269. ISSN 1445-4408

Jarquin, D and Howard, R and Liang, Z and Gupta, S K and Schnable, J C and Crossa, J (2020) Enhancing Hybrid Prediction in Pearl Millet Using Genomic and/or Multi-Environment Phenotypic Information of Inbreds. Frontiers in Genetics (TSI), 10 (1294). pp. 1-11. ISSN 1664-8021

Jayashree, B and Reddy, P T and Leeladevi, Y and Crouch, J H and Mahalakshmi, V and Buhariwalla, H K and Eshwar, K E and Mace, E and Folksterma, R and Senthilvel, S and Varshney, R K and Seetha, K and Rajalakshmi, R and Prasanth, V P and Chandra, S and Swarupa, L and SriKalyani, P and Hoisington, D A (2006) Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping. BMC Bioinformatics, 7 (383). ISSN 1471-2105

Jiang, C and Edmeades, G O and Armstead, I and Lafitte, H R and Hayward, M D and Hoisington, D A (1990) Genetic analysis of adaptation differences between highland and lowland tropical maize using molecular markers. TAG Theoretical and Applied Genetics, 99 (7-8). pp. 1106-1119. ISSN 1432-2242

Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.

K

Kashiwagi, J and Krishnamurthy, L and Serraj, R and Crouch, J H and Panwar, J D S (2007) Rapid and reliable screening technique for root traits in chickpea. Journal of Food Legumes, 20 (1). pp. 67-70.

Kenis, M and Benelli, G and Biondi, A and Calatayud, P A and Day, R and Desneux, N and Harrison, R D and Kriticos, D and Rwomushana, I and Berg, J V D and Verheggen, F and Zhang, Y and Agboyi, L K and Ahissou, R B and Ba, M N and Bernal, J and Bueno, A F and Carrière, Y and Carvalho, G A and Chen, X X and Cicero, L and du Plessis, H and Early, R and Fallet, P and Fiaboe, K K M and Firake, D M and Goergen, G and Groot, A T and Guedes, R N C and Gupta, A and Hu, G and Huang, F N and Jaber, L R and Malo, E A and McCarthy, C B and Meagher, R L Jr and Mohamed, S and Sanchez, D M and Nagoshi, R N and Nègre, N and Niassy, S and Ota, N and Nyamukondiwa, C and Omoto, C and Palli, S R and Pavela, R and Ramirez-Romero, R and Rojas, J C and Subramanian, S and Tabashnik, B E and Tay, W T and Virla, E G and Wang, S and Williams, T and Zang, L and Zhang, L and Wu, K (2022) Invasiveness, biology, ecology, and management of the fall armyworm, Spodoptera frugiperda. Entomologia Generalis. pp. 1-55. ISSN 2363-7102

Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2010) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 121 (05). pp. 971-984. ISSN 1432-2242

Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2011) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 121 (5). pp. 971-984.

Kottapalli, P and Upadhyaya, H D and Kottapalli, K R and Payton, P and Dwivedi, S L and Burow, M and David, K O and Sanogo, S and Puppala, N (2011) Population structure and diversity in Valencia peanut germplasm collection. Crop Science, 51 (3). pp. 1089-1100.

Kruseman, G and Bairagi, S and Komarek, A M and Milan, A M and Nedumaran, S and Petsakos, A and Prager, S and Yigezu, Y A (2020) CGIAR modeling approaches for resource constrained scenarios: IV Models for analyzing socio‐economic factors to improve policy recommendations. Crop Science (TSI). pp. 1-14. ISSN 0011-183X

Kulwal, P L and Thudi, M and Varshney, R K (2013) Crop breeding for sustainable agriculture, genomics interventions in. In: Sustainable Food Production. Springer, New York, pp. 501-513. ISBN 978-1-4614-5796-1

Kumar, P L and Cuervo, M and Kreuze, J F and Muller, G and Kulkarni, G and Kumari, S G and Massart, S and Mezzalama, M and Alakonya, A and Muchugi, A and Graziosi, I and Ndjiondjop, M N and Sharma, R and Negawo, A T (2021) Phytosanitary Interventions for Safe Global Germplasm Exchange and the Prevention of Transboundary Pest Spread: The Role of CGIAR Germplasm Health Units. Plants (TSI), 10 (328). pp. 1-29. ISSN 2223-7747

Kumari, V and Gowda, M V C and Tasiwal, V and Pandey, M K and Bhat, R S and Mallikarjuna, N and Upadhyaya, H D and Varshney, R K (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.). The Crop Journal, 2 (2 - 3). pp. 110-119. ISSN 2214-5141

L

Lu, Y and et al, . (2012) Comparative LD mapping using single SNPs and haplotypes identifies QTL for plant height and biomass as secondary traits of drought tolerance in maize. Molecular Breeding, 30 (1). pp. 407-418. ISSN 1572-9788

Lu, Y and et al, . (2011) Comparative SNP and Haplotype Analysis Reveals a Higher Genetic Diversity and Rapider LD Decay in Tropical than Temperate Germplasm in Maize. PLoS ONE, 6 (9). pp. 1-8. ISSN 1932-6203

M

Maiti, R K and Raju, P S and Reddy, B V S and Peacock, J M (1989) Evaluation of Techniques to Screen for Drought Resistance in Sorghum Seedlings. Turrialba, 39 (1). pp. 106-110.

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N

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Raju, N L and Gnanesh, B N and Pazhamala, L T and Jayashree, B and Pande, S and Hiremath, P and Byregowda, M and Singh, N K and Varshney, R K (2010) The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.). BMC Plant Biology, 10 (45).

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Ravi, K and Vadez, V and Isobe, S and Mir, R R and Guo, Y and Nigam, S N and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Varshney, R K (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 122 (6). pp. 1119-1132. ISSN 1432-2242

Ravi, K and Vadez, V and Isobe, S and Mir, R R and Guo, Y and Nigam, S N and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Varshney, R K (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 122 (6). pp. 1119-1132. ISSN 0040-5752

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Reif, J C and Melchinger, A E and Xia, X C and Warburton, M L and Hoisington, D A and Vasal, S K and Beck, D and Bohn, M and Frisch, M (2003) Use of SSRs for establishing heterotic groups in subtropical maize. TAG Theoretical and Applied Genetics, 107 (5). pp. 947-957. ISSN 1432-2242

Reif, J C and Warburton, M L and Xia, X C and Hoisington, D A and Crossa, J and Taba, S and Muminovic, J and Bohn, M and Frisch, M and Melchinger, A E (2006) Grouping of accessions of Mexican races of maize revisited with SSR markers. TAG Theoretical and Applied Genetics, 113 (2). pp. 177-185. ISSN 1432-2242

Reif, J C and Zhang, P and Dreisigacker, S and Warburton, M L and Ginkel, M van and Hoisington, D A and Bohn, M and Melchinger, A E (2005) Wheat genetic diversity trends during domestication and breeding. TAG Theoretical and Applied Genetics, 110 (5). pp. 859-864. ISSN 1432-2242

Reif, J C and et al, . (2003) Genetic Distance Based on Simple Sequence Repeats and Heterosis in Tropical Maize Populations. Crop Science, 43 (4). pp. 1275-1282. ISSN 0011-183X

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Reynolds, P W and Quilligan, E and Aggarwal, P K and Bansal, K C and Cavalieri, A J and Chapman, S C and Chapotin, S M and Datta, S K and Duveiller, E and Gill, K S and Jagadish, K S V and Joshi, A K and Koehler, A K and Kosina, P and Krishnan, S and Lafitte, R and Mahala, R S and Muthurajan, R and Paterson, A H and Prasanna, B M and Rakshit, S and Rosegrant, M W and Sharma, I and Singh, R P and Sivasankar, S and Vadez, V and Valluru, R and Vara Prasad, P V and Yadav, O P (2016) An integrated approach to maintaining cereal productivity under climate change. Global Food Security, 08 (-). 09-18. ISSN 2211-9124

Ribaut , J M and Jiang, C and Hoisington, D A (2002) Simulation Experiments on Efficiencies of Gene Introgression by Backcrossing. Crop Science, 42 (2). pp. 557-565. ISSN 0011-183X

Robinson, S and D’Croz, D M and Islam, S and Cenacchi, N and Creamer, B and Gueneau, A and Hareau, G and Kleinwechter, U and Mottaleb, K and Nedumaran, S and Robertson, R and Rosegrant, M W and Sika, G and Sulser, T B and Wiebe, K (2015) Climate change adaptation in agriculture: Ex ante analysis of promising and alternative crop technologies using DSSAT and IMPACT. Discussion Paper. IFPRI, Washington, D.C..

Roorkiwal, M and Jarquin, D and Jain, A and Garg, V and Kale, S M and Singh, M K and Samineni, S and Gaur, P M and Rathore, A and Chellapilla, B and Tripathi, S and Crossa, J and Varshney, R K (2017) Genomic-enabled prediction model with genotype × environment interaction in elite chickpea lines. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Roorkiwal, M and Rathore, A and Das, R R and Singh, M K and Jain, A and Samineni, S and Gaur, P M and Chellapilla, B and Tripathi, S and Li, Y and Hickey, J M and Lorenz, A and Sutton, T and Crossa, J and Jannink, J L and Varshney, R K (2016) Genome-Enabled Prediction Models for Yield Related Traits in Chickpea. Frontiers in Plant Science, 7 (1666). 01-13. ISSN 1664-462X

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Santantonio, N and Atanda, S A and Beyene, Y and Varshney, R K and Olsen, M and Jones, E and Roorkiwal, M and Gowda, M and Bharadwaj, C and Gaur, P M and Zhang, X and Dreher, K and Ayala-Hernández, C and Crossa, J and Pérez-Rodríguez, P and Rathore, A and Gao, S Y and McCouch, S and Robbins, K R (2020) Strategies for Effective Use of Genomic Information in Crop Breeding Programs Serving Africa and South Asia. Frontiers in Plant Science (TSI), 11. ISSN 1664-462X

Sarvamangala, C and Gowda, M V C and Varshney, R K (2011) Identification of quantitative trait loci for protein content, oil content and oil quality for groundnut (Arachis hypogaea L.). Field Crops Research, 122 (1). pp. 49-59.

Saxena, R K and Prathima, C and Saxena, K B and Hoisington, D A and Singh, N K and Varshney, R K (2010) Novel SSR Markers for Polymorphism Detection in Pigeonpea (Cajanus spp.). Plant Breeding, 129 (2). pp. 142-148.

Saxena, R K and Saxena, K B and Kumar, R V and Hoisington, D A and Varshney, R K (2010) Simple sequence repeat-based diversity in elite pigeonpea genotypes for developing mapping populations to map resistance to Fusarium wilt and sterility mosaic disease. Plant Breeding, 129. pp. 135-141. ISSN 0179-9541

Saxena, R K and Saxena, K B and Varshney, R K (2010) Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [Cajanus cajan (L.) Millspaugh]. Molecular Breeding, 26. pp. 371-380. ISSN 1572-9788

Saxena, R K and Saxena, K B and Varshney, R K (2010) Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [Cajanus cajan (L.) Millspaugh]. Molecular Breeding, 26 (2). pp. 371-380. ISSN 1380-3743

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Schut, M and Kamanda, J and Gramzow, A and Dubois, T and Stoian, D and Andersson, J A and Dror, I and Sartas, M and Mur, R and Kassam, S and Brouwer, H and Devaux, A and Velasco, C and Flor, R J and Gummert, M and Buizer, D and McDougall, C and Davis, K and Homann-Kee Tui, S and Lundy, M (2019) Innovation platforms in agricultural research for development : Ex-ante Appraisal of the Purposes and Conditions Under Which Innovation Platforms can Contribute to Agricultural Development Outcomes. Experimental Agriculture (TSI), 55 (04). pp. 575-596. ISSN 0014-4797

Semalaiyappan, J and Selvanayagam, S and Rathore, A and Gupta, S K and Chakraborty, A and Gujjula, K R and Haktan, S and Viswanath, A and Malipatil, R and Shah, P and Govindaraj, M and Ignacio, J C and Reddy, S and Singh, A K and Thirunavukkarasu, N (2023) Development of a new AgriSeq 4K mid-density SNP genotyping panel and its utility in pearl millet breeding. Frontiers in Plant Science, 13. 01-14. ISSN 1664-462X

Singh, P K and Mergoum, M and Adhikari, T B and Shah, T and Ghavami, F and Kianian, S F (2010) Genetic and molecular analysis of wheat tan spot resistance effective against Pyrenophora tritici-repentis races 2 and 5. Molecular Breeding, 25. pp. 369-379.

Snapp, S and Sapkota, T B and Chamberlin, J and Cox, C M and Gameda, S and Jat, M L and Marenya, P and Mottalebab, K A and Negra, C and Senthilkumar, K and Sida, T S and Singh, U and Stewart, Z P and Tesfaye, K and Govaerts, B (2023) Spatially differentiated nitrogen supply is key in a global food–fertilizer price crisis. Nature Sustainability. 01-11. ISSN 2398-9629

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Subbarao, G V and Sahrawat, K L and Nakahara, K and Rao, I M and Ishitani, M and Hash, C T and Kishii, M and Bonnett, D G and Berry, W L and Lata, J C (2013) A paradigm shift towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI). Annals of Botany, 112 (2). pp. 297-316. ISSN 0305-7364

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T

Tharanya, M and Kholova, J and Sivasakthi, K and Seghal, D and Hash, C T and Raj, B and Srivastava, R K and Baddam, R and Thirunalasundari, T and Yadav, R and Vadez, V (2018) Quantitative trait loci (QTLs) for water use and crop production traits co-locate with major QTL for tolerance to water deficit in a fine-mapping population of pearl millet (Pennisetum glaucum L. R.Br.). Theoretical and Applied Genetics (TSI). pp. 1-21. ISSN 0040-5752

Thudi, M and Manthena, R and Wani, S P and Tatikonda, L and Hoisington, D A and Varshney, R K (2010) Analysis of Genetic Diversity in Pongamia [Pongamia pinnata (L)Pierrre] using AFLP Markers. Journal of Plant Biochemistry and Biotechnlogy, 19 (2). pp. 209-216.

Thudi, M and Palakurthi, R and Schnable, J C and Chitikineni, A and Dreisigacker, S and Mace, E and Srivastava, R K and Satyavathi, C T and Odeny, D and Tiwari, V K and Lam, H M and Hong, Y B and Singh, V K and Li, G and Xu, Y and Chen, X and Kaila, S and Nguyen, H and Sivasankar, S and Jackson, Scott A. and Close, T J and Shubo, W and Varshney, R K (2021) Genomic resources in plant breeding for sustainable agriculture. Journal of Plant Physiology (TSI), 257. pp. 1-18. ISSN 0176-1617

Thudi, M and Senthilvel, S and Bottley, A and Hash, C T and Reddy, A R and Feltus, A F and Paterson, A H and Hoisington, D A and Varshney, R K (2010) A comparative assessment of the utility of PCR-based marker systems in pearl millet. Euphytica, 174 (2). pp. 253-260. ISSN 0014-2336

Toorop, R A and Lopez-Ridaura, S and Jat, M L and Eichenseer, P and Bijarniya, D and Jat, R K and Groot, J C J (2023) Analyzing antifragility among smallholder farmers in Bihar, India: An assessment of farmers’ vulnerability and the strengths of positive deviants. Experimental Agriculture, 59 (4). 01-17. ISSN 1469-4441

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Upadhyaya, H D and Thudi, M and Dronavalli, N and Gujaria, N and Singh, Sube and Sharma, S and Varshney, R K (2011) Genomic tools and germplasm diversity for chickpea improvement. Plant Genetic Resources : Characterization and Utilization, 9 (1). pp. 45-58.

V

Vadez, V and Krishnamurthy, L and Thudi, M and Anuradha, C and Colmer, T D and Turner, N C and Siddique, K H M and Gaur, P M and Varshney, R K (2012) Assessment of ICCV 2 × JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTLs for seed yield and yield components. Molecular Breeding, 30 (1). pp. 9-21. ISSN 1572-9788

Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696

Varshney, R K and Close, T J and Singh, N K and Hoisington, D A and Cook, D R (2009) Orphan legume crops enter the genomics era! Current Opinion in Plant Biology, 12 (2). pp. 202-210. ISSN 1369-5266

Varshney, R K and Glaszmann, Jean-Christophe and Leung, H and Ribaut, J M (2010) More genomic resources for less-studied crops. Trends in Biotechnology, 28 (9). pp. 452-460. ISSN 0167-7799

Varshney, R K and Hiremath, P J and Pazhamala, L T and Kashiwagi, J and Jayashree, B and Deokar, A A and Vadez, V and Xiao, Y and Srinivasan, R and Gaur, P M and Siddique, K H M and Town, C D and Hoisington, D A (2009) A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics, 10 (523). 18p. ISSN 1471-2164

Varshney, R K and May, G D (2012) Next-generation sequencing technologies: opportunities and obligations in plant genomics. Briefings in Functional Genomics, 11 (1). pp. 1-2. ISSN 2041-2647

Varshney, R K and Mohan, S M and Gaur, P M and Chamarthi, S K and Singh, V K and Samineni, S and Swapna, N and Sharma, M and Singh, S and Kaur, L and Pande, S (2014) Marker-Assisted Backcrossing to Introgress Resistance to Fusarium Wilt Race 1 and Ascochyta Blight in C 214, an Elite Cultivar of Chickpea. The Plant Genome, 7. pp. 1-11. ISSN 1940-3372

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Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743

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Y

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