 | Up a level |
Balaji, J and Crouch, J H and Petite, P V N S and Hoisington, D A (2006) A database of annotated tentative orthologs from crop abiotic stress transcripts. Bioinformation, 1 (6). pp. 225-227.
Bandyopadhyay, T and Swarbreck, S M and Jaiswal, V and Maurya, J and Gupta, R and Bentley, A R and Griffiths, H and Prasad, M (2022) GWAS identifies genetic loci underlying nitrogen responsiveness in the climate resilient C4 model Setaria italica (L.). Journal of Advanced Research, 42. pp. 249-261. ISSN 2090-1224
Bergvinson, D and Willcox , M and Hoisington, D A (1997) Efficacy and Deployment of Transgenic Plants for Stemborer Management. International Journal of Tropical Insect Science formerly Insect Sci Appl, 17 (1). pp. 157-167. ISSN 1742-7584
Bhattacharya, J and Reddy, D S and Prasad, K and Nitnavare, R B and Bhatnagar-Mathur, P and Reddy, P S (2023) Ectopic expression of pigeonpea Orf147 gene imparts partial sterility in Cicer arietinum. Gene, 868. pp. 1-7. ISSN 0378-1119
Bijarniya, D and Groot, J C J and Jat, M L and Toorop, R A and Lopez-Ridaura, S and Kalvania, K C and Jat, R K and Gathala, M K (2024) Holistic analysis of cropping diversity and intensity implications for productive, environmental, and nutritional performance of smallholder farms in Bihar, India. Frontiers in Sustainable Food Systems (TSI), 8. 01-10. ISSN 2571-581X
Bohn, M and Khairallah, M M and González-de-León, D and Hoisington, D A and et al, . (1996) QTL Mapping in Tropical Maize: I. Genomic Regions Affecting Leaf Feeding Resistance to Sugarcane Borer and Other Traits. Crop Science, 36. pp. 1352-1361. ISSN 1435-0653
Bohn, M M and Khairallah, M and Jiang, C and González-de-León, D and Hoisington, D A and et al, . (1997) QTL Mapping in Tropical Maize: II. Comparison of Genomic Regions for Resistance to Diatraea spp. Crop Science, 37 (6). pp. 1892-1902. ISSN 1435-0653
Bohorova, N and Cabrera, M and Abarca, C and Hoisington, D A and et al, . (1997) Susceptibility of Four Tropical Lepidopteran Maize Pests to Bacillus thuringiensis CryI-Type Insecticidal Toxins. Journal of Economic Entomology, 90 (2). pp. 412-415. ISSN 1938-291X
Bohorova, N and Frutos, R and Royer, M and Estanol, P and Pacheco, M and Rascón, Q and McLean, S and Hoisington, D A (2001) Novel synthetic Bacillus thuringiensiscry1B gene and the cry1B-cry1Ab translational fusion confer resistance to southwestern corn borer, sugarcane borer and fall armyworm in transgenic tropical maize. TAG Theoretical and Applied Genetics, 103 (3-4). pp. 817-826. ISSN 1432-2242
Bohorova, N and Maciel, A M and Hoisington, D A (1996) Selection and characterization of Mexican strains of Bacillus thuringiensis active against four major lepidopteran maize pests. Entomophaga, 41 (2). pp. 153-165. ISSN 0013-8959
Bohorova, N and Zhang, W and Julstrum, P and McLean, S and Luna, M and Brito, R M and Diaz, L and Ramos, M E and Estanol, P and Pacheco, M and Salgado, M and Hoisington, D A (1999) Production of transgenic tropical maize with cryIAb and cryIAc genes via microprojectile bombardment of immature embryos. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 437-444. ISSN 1432-2242
Bohorova, N E and Ginkel, M van and Rajaram, V and Hoisington, D A (1995) Tissue culture response of CIMMYT elite bread wheat cultlvars and evaluation of regenerated plants. Cereal Research Communications, 23 (3). pp. 243-249. ISSN 1788-9170
Bohra, A and Mallikarjuna, N and Saxena, K B and Upadhyaya, H D and Vales, I and Varshney, R K (2010) Harnessing the Potential of Crop Wild Relatives through Genomics Tools for Pigeonpea Improvement. Journal of Plant Biology, 37 (1). pp. 83-98.
Brito, R M and Velazquez, L and Noguera, L M and Pfeiffer, W and McLean, S and Hoisington, D A (2002) The effect of pretreatment with mild heat and drought stresses on the explant and biolistic transformation frequency of three durum wheat cultivars. Plant Cell Reports, 20 (10). pp. 955-960. ISSN 1432-203X
Crossa, J and Vargas, M and Eeuwijk, F A van and Jiang, C and Edmeades, G O and Hoisington, D A (1999) Interpreting genotype × environment interaction in tropical maize using linked molecular markers and environmental covariables. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 611-625. ISSN 1432-2242
Cuc, L M and Mace, E S and Crouch, J H and Quang, V D and Long, T D and Varshney, R K (2008) Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea). BMC Plant Biology, 8 (55). pp. 1-11.
Deokar, A A and Kondawar, V and Jain, P K and Karuppayil, S M and Raju, N L and Vadez, V and Varshney, R K and Srinivasan, R (2011) Comparative analysis of expressed sequence tags (ESTs) between drought-tolerant and -susceptible genotypes of chickpea under terminal drought stress. BMC Plant Biology, 11 (70).
Dreisigacker, S and et al, . (2005) Hybrid performance and heterosis in spring bread wheat, and their relations to SSR-based genetic distances and coefficients of parentage. Euphytica, 144 (1-2). pp. 51-59. ISSN 1573-5060
Dreisigacker, S and et al, . (2004) SSR and Pedigree Analyses of Genetic Diversity among CIMMYT Wheat Lines Targeted to Different Megaenvironments. Crop Science, 44 (2). pp. 381-388. ISSN 0011-183X
Dwivedi, S and Perotti, E and Ortiz, R (2008) Towards molecular breeding of reproductive traits in cereal crops. Plant Biotechnology Journal, 6 (6). pp. 529-559. ISSN 1467-7652
Dwivedi, S L and Crouch, J H and Mackill, D J and Yunbi, Xu and Blair, M W and Ragot, M and Upadhyaya, H D and Ortiz, R (2007) The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy , 95. pp. 163-318. ISSN 0065-2113
Dwivedi, S L and Perotti, E and Upadhyaya, H D and Ortiz, R (2010) Sexual and apomictic plant reproduction in the genomics era: exploring the mechanisms potentially useful in crop plants. Sexual Plant Reproduction, 23 (4). pp. 265-279. ISSN 1432-2145
Farkhari, Md and et al, . (2011) Recombination frequency variation in maize as revealed by genomewide single-nucleotide polymorphisms. Plant Breeding, 130 (5). pp. 533-539. ISSN 1439-0523
Fedoroff, N V and Battisti, D S and Beachy, R N and Cooper, P J M and et al, . (2010) Radically Rethinking Agriculture for the 21st Century. Science, 327 (5967). pp. 833-834. ISSN 0036-8075
Fennell, S and Bohorova, N and Hoisington, D A and et al, . (1996) Plant regeneration from immature embryos of 48 elite CIMMYT bread wheats. TAG Theoretical and Applied Genetics, 92 (2). pp. 163-169. ISSN 1432-2242
Ferrara, G O and Mosaad, M G and Mahalakshmi, V and Rajaram, S (1998) Photoperiod and vernalisation response of Mediterranean wheats, and implications for adaptation. Euphytica, 100 (1-3). pp. 377-384. ISSN 0014-2336
Flowers, T J and Gaur, P M and Gowda, C L L and Krishnamurthy, L and Samineni, S and Siddique, K H M and Turner, N C and Vadez, V and Varshney, R K and Colmer, T D (2010) Salt sensitivity in chickpea. Plant, Cell and Environment , 33 (4). pp. 490-509. ISSN 0140-7791
Franco, J and Crossa, J and Desphande, S (2010) Hierarchical multiple-factor analysis for classifying genotypes based on phenotypic and genetic data. Crop Science, 50 (1). pp. 105-117.
Gardiner, J M and Coe, E H and Melia-Hancock, S and Hoisington, D A (1993) Development of a Core RFLP Map in Maize Using an Immortalized F2 Population. Genetics, 134. pp. 917-930. ISSN 1943-2631
Garrett, K A and et al, . (2011) Complexity in climate-change impacts: an analytical framework for effects mediated by plant disease. Plant Pathology, 60 (1). pp. 15-30. ISSN 1365-3059
George, M L and et al, . (2004) Genetic diversity of maize inbred lines in relation to downy mildew. Euphytica, 135 (2). pp. 145-155. ISSN 1573-5060
George, M L C and Prasanna, B M P and Rathore, R S and Setty, T A S and Kasim, F and Azrai, M and Vasal, S and Balla, O and Hautea, D and Canama, A and Regalado, E and Vargas, M and Khairallah, M and Jeffers, D and Hoisington, D A (2003) Identification of QTLs conferring resistance to downy mildews of maize in Asia. TAG Theoretical and Applied Genetics, 107 (3). pp. 544-551. ISSN 1432-2242
George, M L C and Regalado, E and Li, W and Cao, M and Dahlan, M and Pabendon, M and Warburton, M L and Xianchun, X and Hoisington, D A (2003) Molecular characterization of Asian maize inbred lines by multiple laboratories. TAG Theoretical and Applied Genetics, 109 (1). pp. 80-91. ISSN 1432-2242
Gnanesh, B N and Bohra, A and Sharma, M and Byregowda, M and Pandey, S and Wesley, V and Saxena, R K and Saxena, K B and Kavi Kishor, P B and Varshney, R K (2011) Genetic mapping and quantitative trait locus analysis of resistance to sterility mosaic disease in pigeonpea [Cajanus cajan (L.) Millsp.]. Field Crops Research, 123. pp. 53-61.
Gora, M K and Jat, H S and Ladha, J K and Choudhary, M and Sharma, P C and Yadav, A K and Singh, L K and Sapkota, T B and Singh, Y and Prajapat, K and Yadav, R K and Jat, M L and Krupnik, T J and Gathala, M K (2024) Enhancing productivity, soil health, and reducing global warming potential through diverse conservation agriculture cropping systems in India’s Western Indo-Gangetic Plains. Field Crops Research (TSI), 315. pp. 1-15. ISSN 0378-4290
Gowda, M V C and Bhat, R S and Sujay, V and Kusuma, P and Kumari, Varsha and Varshney, R K and Bhat, S (2011) Characterization of AhMITE1 transposition and its association with the mutational and evolutionary origin of botanical types in peanut (Arachis spp.). Plant Systematics and Evolution, 291 (3-4). pp. 153-158.
Groh, S and González-de-León, D and Khairallah, M M and Hoisington, D A and et al, . (1998) QTL Mapping in Tropical Maize: III. Genomic Regions for Resistance to Diatraea spp. and Associated Traits in Two RIL Populations. Crop Science, 38 (4). pp. 1062-1072. ISSN 1435-0653
Groh, S and Khairallah, M M and Hoisington, D A and et al, . (1998) Comparison of QTLs mapped in RILs and their test-cross progenies of tropical maize for insect resistance and agronomic traits. Plant Breeding, 117. pp. 193-202. ISSN 0179-9541
Gujaria, N and Kumar, Ashish and Dauthal, P and Dubey, A and Hiremath, P and Bhanu Prakash, A and Farmer, A and Bhide, M and Shah, T and Gaur, P M and Upadhyaya, H D and Bhatia, S and Cook, D R and May, G D and Varshney, R K (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.). TAG Theoretical and Applied Genetics, 122. pp. 1577-1589. ISSN 1432-2242
Gurney, A L and et al, . (2003) Novel sources of resistance to Striga hermonthica in Tripsacum dactyloides, a wild relative of maize. New Phytologist, 160 (3). pp. 557-568. ISSN 1469-8137
Hoisington, D and Khairallah, M and Reeves, T and Ribaut, J M and Skovmand, B and Taba, S and Warburton, M (1999) Plant genetic resources: What can they contribute toward increased crop productivity? Proceedings of the National Academy of Sciences, 96 (11). pp. 5937-5943. ISSN 1091-6490
Hoisington, D A and Khairallah, M and Reeves, T and Ribaut, J M and Skovmand, B and Taba, S and Warburton, M (1999) Plant genetic resources: What can they contribute toward increased crop productivity? Proceedings of the National Academy of Sciences, 96 (11). pp. 5937-5943. ISSN 1091-6490
Inagaki, M N and Hash, C T (1998) Production of haploids in bread wheat, durum wheat and hexaploid triticale crossed with pearl millet. Plant Breeding, 117 (5). pp. 485-487. ISSN 1439-0523
Ishtiaque, A and Krupnik, T J and Krishna, V and Uddin, M N and Aryal, J P and Srivastava, A K and Kumar, S and Shahzad, M F and Bhatt, R and Gardezi, M and Bahinipati, C S and Nazu, S B and Ghimire, R and Anik, A R and Sapkota, T B and Ghosh, M and Subedi, R and Sardar, A and Uddin, K M Z and Khatri-Chhetri, A and Rahman, M S and Singh, B and Jain, M (2024) Overcoming barriers to climate-smart agriculture in South Asia. Nature Climate Change. pp. 1-3. ISSN 1758-6798
Jayashree, B and Reddy, P T and Leeladevi, Y and Crouch, J H and Mahalakshmi, V and Buhariwalla, H K and Eshwar, K E and Mace, E and Folksterma, R and Senthilvel, S and Varshney, R K and Seetha, K and Rajalakshmi, R and Prasanth, V P and Chandra, S and Swarupa, L and SriKalyani, P and Hoisington, D A (2006) Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping. BMC Bioinformatics, 7 (383). ISSN 1471-2105
Jiang, C and Edmeades, G O and Armstead, I and Lafitte, H R and Hayward, M D and Hoisington, D A (1990) Genetic analysis of adaptation differences between highland and lowland tropical maize using molecular markers. TAG Theoretical and Applied Genetics, 99 (7-8). pp. 1106-1119. ISSN 1432-2242
Kanampiu, F and Ransom, J and Gressel, J and Jewell, D and Friesen, D and Grimanelli, D and Hoisington, D A (2002) Appropriateness of biotechnology to African agriculture: Striga and maize as paradigms. Plant Cell, Tissue and Organ Culture, 69 (2). pp. 105-110. ISSN 1573-5044
Khedikar, Y P and Gowda, M V C and Sarvamangala, C and Patgar, K V and Upadhyaya, H D and Varshney, R K (2011) A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 121 (5). pp. 971-984.
Lu, Y and et al, . (2012) Comparative LD mapping using single SNPs and haplotypes identifies QTL for plant height and biomass as secondary traits of drought tolerance in maize. Molecular Breeding, 30 (1). pp. 407-418. ISSN 1572-9788
Lu, Y and et al, . (2011) Comparative SNP and Haplotype Analysis Reveals a Higher Genetic Diversity and Rapider LD Decay in Tropical than Temperate Germplasm in Maize. PLoS ONE, 6 (9). pp. 1-8. ISSN 1932-6203
Montesinos-López, O A and Montesinos-Lopez, A and Acosta, R and Varshney, R K and Bentley, A and Crossa, J (2022) Using an incomplete block design to allocate lines to environments improves sparse genome-based prediction in plant breeding. The Plant Genome (TSI), 15 (1). pp. 1-24. ISSN 1940-3372
Montesinos-López, O A and Montesinos-López, J C and Montesinos-Lopez, A and Ramírez-Alcaraz, J M and Poland, J and Singh, R and Dreisigacker, S and Crespo, L and Mondal, S and Govidan, V and Juliana, P and Espino, J H and Shrestha, S and Varshney, R K and Crossa, J (2021) Bayesian multitrait kernel methods improve multienvironment genome-based prediction. G3: Genes, Genomes, Genetics (TSI), 12 (2). pp. 1-17. ISSN 2160-1836
Nayak, H S and Parihar, C M and Aravindakshan, S and Silva, J S and Krupnik, T J and McDonald, A J and Kakraliya, S K and Sena, D R and Kumar, V and Sherpa, S R and Bijarniya, D and Singh, L K and Kumar, M and Choudhary, K M and Kumar, S and Kumar, Y and Jat, H S and Sidhu, H S and Jat, M L and Sapkota, T B (2023) Pathways and determinants of sustainable energy use for rice farms in India. Energy, 272. pp. 1-13. ISSN 0360-5442
Nayak, H S and Silva, J S and Parihar, C M and Krupnik, T J and Sena, D R and Kakraliya, S K and Jat, H S and Sidhu, H S and Sharma, P C and Jat, M L and Sapkota, T B (2022) Interpretable machine learning methods to explain on-farm yield variability of high productivity wheat in Northwest India. Field Crops Research (TSI), 287. pp. 1-14. ISSN 0378-4290
Nayak, S N and Zhu, H and Varghese, N and Datta, S and Choi, H K and Horres, R and Jüngling, R and Singh, J and Kavi Kishor, P B and Sivaramakrishnan, S and Hoisington, D A and Khal, G and Winter, P and Cook, D R and Varshney, R K (2010) Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome. TAG Theoretical and Applied Genetics, 120 (7). pp. 1415-1441.
Nitnavare, R B and Pothana, A and Yeshvekar, R K and Bhattacharya, J and Sapara, V and Reddy, P S and Ramtirtha, Y and Tarafdar, A and Sharma, M and Bhatnagar-Mathur, P (2022) Chickpea Defensin Gene Family: Promising Candidates for Resistance Against Soil-Borne Chickpea Fungal Pathogens. Journal of Plant Growth Regulation, 42. pp. 6244-6260. ISSN 1435-8107
Odeny, D A and Jayashree, B and Ferguson, M and Hoisington, D A and Crouch, J H and Gebhard, C (2007) Development, characterization and utilization of microsatellite markers in pigeonpea. Plant Breeding, 126 (2). pp. 130-136.
Pellegrineschi, A and Brito, R M and McLean, S and Hoisington, D A (2004) Effect of 2,4-Dichlorophenoxyacetic Acid and NaCl on the Establishment of Callus and Plant Regeneration in Durum and Bread Wheat. Plant Cell, Tissue and Organ Culture, 77 (3). pp. 245-250. ISSN 1573-5044
Pellegrineschi, A and et al, . (2002) Identification of highly transformable wheat genotypes for mass production of fertile transgenic plants. Genome, 45 (2). pp. 421-430. ISSN 0831-2796
Pellegrineschi, A and et al, . (2004) Stress-induced expression in wheat of the Arabidopsis thaliana DREB1A gene delays water stress symptoms under greenhouse conditions. Genome, 47 (3). pp. 493-500. ISSN 1480-3321
Pellegrineschi, A and et al, . (2001) Transgenic wheat plants: a powerful breeding source. Euphytica, 119 (1-2). pp. 135-138. ISSN 1573-5060
Pernet, A and Hoisington, D A and et al, . (1999) Genetic mapping of maize streak virus resistance from the Mascarene source. I. Resistance in line D211 and stability against different virus clones. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 524-539. ISSN 1432-2242
Pernet, A and Hoisington, D A and et al, . (1999) Genetic mapping of maize streak virus resistance from the Mascarene source. II. Resistance in line CIRAD390 and stability across germplasm. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 540-553. ISSN 1432-2242
Prasad, K and Yogendra, K and Sanivarapu, H and Rajasekaran, K and Cary, J W and Sharma, K K and Bhatnagar-Mathur, P (2023) Multiplexed Host-Induced Gene Silencing of Aspergillus flavus Genes Confers Aflatoxin Resistance in Groundnut. Toxins (TSI), 15 (5). pp. 1-23. ISSN 2072-6651
Prasanna, B M and Hoisington, D A (2003) Molecular Breeding for Maize Improvement: An Overview. Indian Journal of Biotechnology , 2 (1). pp. 85-98. ISSN 0972-5849
Ragot, M and Hoisington, D A (1993) Molecular markers for plant breeding: comparisons of RFLP and RAPD genotyping costs. TAG Theoretical and Applied Genetics, 86 (8). pp. 975-984. ISSN 1432-2242
Ragot, M. and Sisco, P H and Hoisington, D A and Stuber, C W (1995) Molecular-Marker-Mediated Characterization of Favorable Exotic Alleles at Quantitative Trait Loci in Maize. Crop Science, 35. pp. 1306-1315. ISSN 1435-0653
Raju, N L and Gnanesh, B N and Pazhamala, L T and Jayashree, B and Pande, S and Hiremath, P and Byregowda, M and Singh, N K and Varshney, R K (2010) The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.). BMC Plant Biology, 10 (45).
Ramanagouda, G and Naik, M K and Nitnavare, R B and Yeshvekar, R and Bhattacharya, J and Bhatnagar-Mathur, P and Sharma, M (2023) Genetic enhancement of Trichoderma asperellum biocontrol potentials and carbendazim tolerance for chickpea dry root rot disease management. PLoS ONE (TSI), 18 (1). ISSN 1932-6203
Ramirez-Villegas, J and Khoury, C K and Achicanoy, H A and Diaz, M V and Mendez, A C and Sosa, C C and Kehel, Z and Guarino, L and Abberton, M and Aunario, J and Awar, B A and Alarcon, J C and Amri, A and Anglin, N L and Azevedo, V and Aziz, K and Capilit, G L and Chavez, O and Chebotarov, D and Costich, D E and Debouck, D G and Ellis, D and Falalou, H and Fiu, A and Ghanem, M E and Giovannini, P and Goungoulou, A J and Gueye, B and Hobyb, A I E and Jamnadass, R and Jones, C S and Kpeki, B and Lee, J and McNally, K L and Muchugi, A and Ndjiondjop, M N and Oyatomi, O and Payne, T S and Ramachandran, S and Rossel, G and Roux, N and Ruas, M and Sansaloni, C and Sardos, J and Setiyono, T D and Tchamba, M and Houwe, I v d and Velazquez, J A and Venuprasad, R and Wenzl, P and Yazbek, M and Zavala, C (2022) State of ex situ conservation of landrace groups of 25 major crops. Nature Plants, 8. pp. 491-499. ISSN 2055-0278
Rang, C and et al, . (2004) Competition of Bacillus thuringiensis Cry1 Toxins for Midgut Binding Sites: A Basis for the Development and Management of Transgenic Tropical Maize Resistant to Several Stemborers. Current Microbiology, 49 (1). pp. 22-27. ISSN 1432-0991
Ravi, K and Vadez, V and Isobe, S and Mir, R R and Guo, Y and Nigam, S N and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Varshney, R K (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 122 (6). pp. 1119-1132. ISSN 1432-2242
Reddy, B V S and Wani, S P and Ramesh, S and Bohn, M and Dixon, J and Araus, J L and Warburton, M and Sayre, K and Iwanaga, M and Crouch, J H and Ortiz, R (2006) Bioenergy and agricultural research for development. Bioenergy and Agriculture: Promises and Challenges. pp. 1-2.
Reif, J C and Melchinger, A E and Xia, X C and Warburton, M L and Hoisington, D A and Vasal, S K and Beck, D and Bohn, M and Frisch, M (2003) Use of SSRs for establishing heterotic groups in subtropical maize. TAG Theoretical and Applied Genetics, 107 (5). pp. 947-957. ISSN 1432-2242
Reif, J C and Zhang, P and Dreisigacker, S and Warburton, M L and Ginkel, M van and Hoisington, D A and Bohn, M and Melchinger, A E (2005) Wheat genetic diversity trends during domestication and breeding. TAG Theoretical and Applied Genetics, 110 (5). pp. 859-864. ISSN 1432-2242
Reif, J C and et al, . (2003) Genetic Distance Based on Simple Sequence Repeats and Heterosis in Tropical Maize Populations. Crop Science, 43 (4). pp. 1275-1282. ISSN 0011-183X
Reif, J C and et al, . (2004) Genetic Diversity Determined within and among CIMMYT Maize Populations of Tropical, Subtropical, and Temperate Germplasm by SSR Markers. Crop Science, 44 (1). pp. 326-334. ISSN 0011-183X
Ribaut, J M and Hoisington, D A (1998) Marker-assisted selection: new tools and strategies. Trends in Plant Science, 3 (6). pp. 236-239. ISSN 1360-1385
Ribaut, J M and Hu, X and Hoisington, D A (1997) Use of STSs and SSRs as rapid and reliable preselection tools in a marker-assisted selection-backcross scheme. Plant Molecular Biology Reporter, 15 (2). pp. 154-162. ISSN 1572-9818
Ribaut, J M and Jiang, C and Hoisington, D A and et al, . (1996) Identification of quantitative trait loci under drought conditions in tropical maize. 2. Yield components and marker-assisted selection strategies. TAG Theoretical and Applied Genetics, 94 (6-7). pp. 887-896. ISSN 1432-2242
Ribaut , J M and Jiang, C and Hoisington, D A (2002) Simulation Experiments on Efficiencies of Gene Introgression by Backcrossing. Crop Science, 42 (2). pp. 557-565. ISSN 0011-183X
Sarvamangala, C and Gowda, M V C and Varshney, R K (2011) Identification of quantitative trait loci for protein content, oil content and oil quality for groundnut (Arachis hypogaea L.). Field Crops Research, 122 (1). pp. 49-59.
Sawkins, M C and Farmer, A D and Hoisington, D A and Sullivan, J and Tolopko, A and Jiang, Z and Ribaut, J M (2004) Comparative Map and Trait Viewer (CMTV): an integrated bioinformatic tool to construct consensus maps and compare QTL and functional genomics data across genomes and experiments. Plant Molecular Biology, 56 (3). pp. 465-480. ISSN 1573-5028
Saxena, R K and Prathima, C and Saxena, K B and Hoisington, D A and Singh, N K and Varshney, R K (2010) Novel SSR Markers for Polymorphism Detection in Pigeonpea (Cajanus spp.). Plant Breeding, 129 (2). pp. 142-148.
Saxena, R K and Saxena, K B and Kumar, R V and Hoisington, D A and Varshney, R K (2010) Simple sequence repeat-based diversity in elite pigeonpea genotypes for developing mapping populations to map resistance to Fusarium wilt and sterility mosaic disease. Plant Breeding, 129. pp. 135-141. ISSN 0179-9541
Saxena, R K and Saxena, K B and Varshney, R K (2010) Application of SSR markers for molecular characterization of hybrid parents and purity assessment of ICPH 2438 hybrid of pigeonpea [Cajanus cajan (L.) Millspaugh]. Molecular Breeding, 26. pp. 371-380. ISSN 1572-9788
Sharma, K K and Palakolanu, S R and Bhattacharya, J and Shankhapal, A R and Bhatnagar-Mathur, P (2022) CRISPR for accelerating genetic gains in under-utilized crops of the drylands: Progress and prospects. Frontiers in Genetics (TSI), 13. pp. 1-20. ISSN 1664-8021
Singh, P K and Mergoum, M and Adhikari, T B and Shah, T and Ghavami, F and Kianian, S F (2010) Genetic and molecular analysis of wheat tan spot resistance effective against Pyrenophora tritici-repentis races 2 and 5. Molecular Breeding, 25. pp. 369-379.
Snapp, S and Sapkota, T B and Chamberlin, J and Cox, C M and Gameda, S and Jat, M L and Marenya, P and Mottalebab, K A and Negra, C and Senthilkumar, K and Sida, T S and Singh, U and Stewart, Z P and Tesfaye, K and Govaerts, B (2023) Spatially differentiated nitrogen supply is key in a global food–fertilizer price crisis. Nature Sustainability, 6. pp. 1268-1278. ISSN 2398-9629
Subbarao, G V and Sahrawat, K L and Nakahara, K and Rao, I M and Ishitani, M and Hash, C T and Kishii, M and Bonnett, D G and Berry, W L and Lata, J C (2013) A paradigm shift towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI). Annals of Botany, 112 (2). pp. 297-316. ISSN 0305-7364
Subbarao, G V and et al, . (2007) Can biological nitrification inhibition (BNI) genes from perennial Leymus racemosus (Triticeae) combat nitrification in wheat farming? Plant and Soil, 299 (1-2). pp. 55-64. ISSN 1573-5036
Suenaga, K. and Khairallah, M and William, H M and Hoisington, D A (2005) A new intervarietal linkage map and its application for quantitative trait locus analysis of "gigas" features in bread wheat. Genome, 48 (1). pp. 65-75. ISSN 1480-3321
Thudi, M and Manthena, R and Wani, S P and Tatikonda, L and Hoisington, D A and Varshney, R K (2010) Analysis of Genetic Diversity in Pongamia [Pongamia pinnata (L)Pierrre] using AFLP Markers. Journal of Plant Biochemistry and Biotechnlogy, 19 (2). pp. 209-216.
Thudi, M and Senthilvel, S and Bottley, A and Hash, C T and Reddy, A R and Feltus, A F and Paterson, A H and Hoisington, D A and Varshney, R K (2010) A comparative assessment of the utility of PCR-based marker systems in pearl millet. Euphytica, 174 (2). pp. 253-260. ISSN 0014-2336
Toorop, R A and Lopez-Ridaura, S and Jat, M L and Eichenseer, P and Bijarniya, D and Jat, R K and Groot, J C J (2023) Analyzing antifragility among smallholder farmers in Bihar, India: An assessment of farmers’ vulnerability and the strengths of positive deviants. Experimental Agriculture, 59 (4). 01-17. ISSN 1469-4441
Upadhyaya, H D and Thudi, M and Dronavalli, N and Gujaria, N and Singh, Sube and Sharma, S and Varshney, R K (2011) Genomic tools and germplasm diversity for chickpea improvement. Plant Genetic Resources : Characterization and Utilization, 9 (1). pp. 45-58.
Vadez, V and Krishnamurthy, L and Thudi, M and Anuradha, C and Colmer, T D and Turner, N C and Siddique, K H M and Gaur, P M and Varshney, R K (2012) Assessment of ICCV 2 × JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTLs for seed yield and yield components. Molecular Breeding, 30 (1). pp. 9-21. ISSN 1572-9788
Varshney, R K and Chen, W and Li, Y and Bharti, A K and Saxena, R K and Schlueter, J A and Donoghue, M T A and Azam, S and Fan, G and Whaley, A M and Farmer, A D and Sheridan, J and Iwata, A and Tuteja, R and Penmetsa, R V and Wu, W and Upadhyaya, H D and Yang, S P and Shah, T and Saxena, K B and Michael, T and McCombie, W R and Yang, B and Zhang, G and Yang, H and Wang, J and Spillane, C and Cook, D R and May, G D and Xu, X and Jackson, S A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1546-1696
Varshney, R K and Glaszmann, Jean-Christophe and Leung, H and Ribaut, J M (2010) More genomic resources for less-studied crops. Trends in Biotechnology, 28 (9). pp. 452-460. ISSN 0167-7799
Varshney, R K and Hiremath, P J and Pazhamala, L T and Kashiwagi, J and Jayashree, B and Deokar, A A and Vadez, V and Xiao, Y and Srinivasan, R and Gaur, P M and Siddique, K H M and Town, C D and Hoisington, D A (2009) A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics, 10 (523). 18p. ISSN 1471-2164
Varshney, R K and May, G D (2012) Next-generation sequencing technologies: opportunities and obligations in plant genomics. Briefings in Functional Genomics, 11 (1). pp. 1-2. ISSN 2041-2647
Varshney, R K and Mohan, S M and Gaur, P M and Chamarthi, S K and Singh, V K and Samineni, S and Swapna, N and Sharma, M and Singh, S and Kaur, L and Pande, S (2014) Marker-Assisted Backcrossing to Introgress Resistance to Fusarium Wilt Race 1 and Ascochyta Blight in C 214, an Elite Cultivar of Chickpea. The Plant Genome, 7. pp. 1-11. ISSN 1940-3372
Varshney, R K and Penmetsa, R V and Dutta, S and Kulwal, P L and Saxena, R K and Datta, S and Sharma, T R and Rosen, B and Carrasquilla-Garcia, N and Farmer, A D and Dubey, A and Saxena, K B and Gao, J and Fakrudin, B and Singh, M N and Singh, B P and Wanjari, K B and Yuan, M and Srivastava, R K and Kilian, A and Upadhyaya, H D and Mallikarjuna, N and Town, C D and Bruening, G E and He, G and May, G D and McCombie, R and Jackson, S A and Singh, N K and Cook, D R (2010) Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.). Molecular Breeding, 26 (3). pp. 393-408. ISSN 1380-3743
Varshney, R K and Ribaut, J M and Buckler, E S and et al, . (2012) Can genomics boost productivity of orphan crops? Nature Biotechnology, 30. pp. 1172-1176. ISSN 1087-0156
Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687
Vazquez, M D and et al, . (2012) Genetic analysis of adult plant, quantitative resistance to stripe rust in wheat cultivar ‘Stephens’ in multi-environment trials. TAG Theoretical and Applied Genetics, 124 (1). pp. 1-11. ISSN 1432-2242
Wen, W and Taba, S and Shah, T and Tovar, V H C and Yan, J (2011) Detection of genetic integrity of conserved maize (Zea mays L.) germplasm in genebanks using SNP markers. Genetic Resources and Crop Evolution, 58. pp. 189-207.
Wen, W and et al, . (2011) Molecular Characterization of a Diverse Maize Inbred Line Collection and its Potential Utilization for Stress Tolerance Improvement. Crop Science, 51 (6). pp. 2569-2581. ISSN 0011-183X
Willcox , M C (2002) Selection for Resistance to Southwestern Corn Borer Using Marker-Assisted and Conventional Backcrossing. Crop Science, 45 (2). pp. 1516-1528. ISSN 0011-183X
William, H M and Hoisington, D A and et al, . (1997) Detection of quantitative trait loci associated with leaf rust resistance in bread wheat. Genome, 40 (2). pp. 253-260. ISSN 1480-3321
William, H M and Singh, R P and Trethowan, R and Ginkel, M van and Pellegrinshi, A and Huerta-Espino , J and Hoisington, D A (2005) Biotechnology Applications for Wheat Improvement at CIMMYT. Turkish Journal of Agriculture and Forestry , 29 (2). pp. 113-119. ISSN 1303-6173
William, M and Singh, R P and Huerta-Espino, J and Islas, S O and Hoisington, D A (2003) Molecular Marker Mapping of Leaf Rust Resistance Gene Lr46 and Its Association with Stripe Rust Resistance Gene Yr29 in Wheat. Phytopathology , 93 (2). pp. 153-159. ISSN 0031-949X
Xu, W W and Sleper, D A and Hoisington, D A (1991) A survey of restriction fragment length polymorphisms in tall fescue and its relatives. Genome, 34 (5). pp. 686-692. ISSN 1480-3321
Yan, J and Yang, X and Shah, T and Sanchez-Villeda, H and Liu, J and Warburton, M and Zhou, Yi and Crouch, J H and Xu, Y (2010) High-throughput SNP genotyping with the GoldenGate assay in maize. Mol Breeding, 25. pp. 441-451.
Yang, S Y and Saxena, R K and Kulwal, P and Ash, G J and Dubey, A and Harper, J D I and Upadhyaya, H D and Gothalwal, R and Kilian, A and Varshney, R K (2011) The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers. Journal of Genetics, 90 (1). pp. 103-109.
Yang, X and Yan, J and Shah, T and Warburton, M L and et al, . (2010) Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection. Theoretical and Applied Genetics, 121 (3). pp. 417-431. ISSN 0040-5752
Yang, X and et al, . (2011) Comparison of SSRs and SNPs in assessment of genetic relatedness in maize. Genetica, 139 (8). 045-1054. ISSN 1573-6857
Yanli, Lu and Shihuang, Zhang and Trushar, Shah and Chuanxiao, Xie and Zhuanfang, Hao and Xinhai, Li and Farkhari, Md and Jean-Marcel, Ribaut and Moju, Cao and Tingzhao, Rong and Yunbi, Xu (2010) Joint linkage–linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize. Proceedings of the National Academy of Sciences of the United States of America (PNAS) ISSN 1091-6490, 1. pp. 1-6.
Bohar, R and Dreisigacker, S and Lindqvist-Kreuze, H and Kante, M and Pandey, M K and Sharma, V and Chaudhari, S and Varshney, R K (2024) Forward Breeding for Efficient Selection. In: Frontier Technologies for Crop Improvement. Sustainability Sciences in Asia and Africa . Springer, Singapore, pp. 153-185. ISBN 978-981-99-4673-0
Dwivedi, S L and Upadhyaya, H D and Balaji, J and Buhariwalla, H K and Blair, M W and Ortiz, R and Crouch, J H and Serraj, R (2006) Using Genomics to Exploit Grain Legume Biodiversity in Crop Improvement. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 171-358. ISBN 978-0-471-73215-0
Dwivedi, S L and Upadhyaya, H D and Stalker, H T and Blair, M W and Bertioli, D J and Nielen, S and Ortiz, R (2008) Enhancing Crop Gene Pools with Beneficial Traits Using Wild Relatives. In: Plant Breeding Reviews. John Wiley & Sons, New York, USA, pp. 179-230. ISBN 9780470171523
Hoisington, D A and Bohorova, N and Fennell, S and Khairallah, M and Pellegrineschi, A and Ribaut, J M (2002) The application of biotechnology to wheat improvement. In: Bread Wheat Improvement and Production. FAO Plant Production and Protection Series (30). Food and Agriculture Organization of the United Nations., pp. 175-198. ISBN 92-5-104809-6
Kulwal, P L and Thudi, M and Varshney, R K (2013) Crop breeding for sustainable agriculture, genomics interventions in. In: Sustainable Food Production. Springer, New York, pp. 501-513. ISBN 978-1-4614-5796-1
Pandey, M K and Bentley, A and Desmae, H and Roorkiwal, M and Varshney, R K (2024) Introduction: Frontier Technologies for Crop Improvement. In: Frontier Technologies for Crop Improvement. Sustainability Sciences in Asia and Africa . Springer, Singapore, pp. 1-7. ISBN 978-981-99-4673-0
Ortiz, R and Crouch, J H and Iwanaga, M and Sayre, K and Warburton, M and Araus, J L and Dixon, J and Bohn, M and Reddy, B V S and Ramesh, S and Wani, S P (2006) Bioenergy and Agriculture:Promises and Challenges.Bioenergy and Agricultural Research for Development.Policy Brief No 7 of 12. Monograph. International Food Policy Research Institute, Washington D.C, USA.
Upadhyaya, H D and Baum, M and Dwivedi, S L and et al, . (2005) Mining allelic variation associated with beneficial traits in composite collection of chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Bandyopadhyay, R and et al, . (2007) Consultative Group on International Agricultural Research (CGIAR) research-fordevelopment agenda on mycotoxins for enhanced food safety and trade. In: Proceedings of XVI International Plant Protection Congress 2007, 15-18 October 2007, Glasgow, UK.
Jorge, M A and Claessens, G and Hanson, J and et al, . (2011) Knowledge sharing on best practices for managing crop genebanks. In: Scientific and Technical Information and Rural Development IAALD XIIIth World Congress, 26-29 April 2010, Montpellier.
Reddy, B V S and Wani, S P and Sreedevi, T K and Ashok Kumar, A and Ortiz, R and Ramesh, S and Ceballos, H (2006) Agricultural research and energy security the crop link to bio-energy. In: Global Forum on Agricultural Research (GFAR) Triennial Conference, 8−11 November 2006, New Delhi, India.
Poland, D and Sawkins, M and Ribaut, J M and Hoisington, D A, eds. (2004) Resilient Crops for Water Limited Environments: Proceedings of a Workshop Held at Cuernavaca Mexico 24 – 28 May 2004. International Maize and Wheat Improvement Center (CIMMYT), Mexico. ISBN 970-648-124-9