Browse by ICRISAT Creators

Agricultural Research Station (ARS)-Gulbarga, University of Agricultural Sciences (UAS) (Raichur)

Saxena, R K and Singh, V K and Kale, S M and Tathineni, R and Parupalli, S and Kumar, V and Garg, V and Das, R R and Sharma, M and Yamini, K N and Muniswamy, S and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Kishor, P B K and Varshney, R K (2017) Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea. Scientific Reports, 7 (1911). pp. 1-11. ISSN 2045-2322

Singh, V K and Khan, A W and Saxena, R K and Kumar, V and Kale, S M and Sinha, P and Chitikineni, A and Pazhamala, L T and Garg, V and Sharma, M and Sameer Kumar, C V and Parupalli, S and Vechalapu, S and Patil, S and Muniswamy, S and Ghanta, A and Yamini, K N and Dharmaraj, P S and Varshney, R K (2016) Next-generation sequencing for identification of candidate genes for Fusarium wilt and sterility mosaic disease in pigeonpea (Cajanus cajan). Plant Biotechnology Journal, 14. pp. 1183-1194. ISSN 1467-7644

Agronomy Department, University of Florida (Gainesville)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Amity University (Mumbai)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

BGI-Fuyang, BGI-Shenzhen (Fuyang)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

BGI-Qingdao (Qingdao)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

BGI-Qingdao, BGI-Shenzhen (Qingdao)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

BGI-Shenzhen (Beijing)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

BGI-Shenzhen (Qingdao)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

BGI-Shenzhen (Shenzhen)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Garg, V and Khan, A W and Kudapa, H and Kale, S M and Chitikineni, A and Qiwei, S and Sharma, M and Li, C and Zhang, B and Xin, L and Kavi Kishor, P B and Varshney, R K (2019) Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal (TSI), 17 (5). pp. 914-931. ISSN 1467-7644

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

BGI-Shenzhen, (Shenzhen)

Sinha, P and Singh, V K and Saxena, R K and Kale, S M and Li, Y and Garg, V and Meifang, T and Khan, A W and Kim, K D and Chitikineni, A and Saxena, K B and Sameer Kumar, C V and Liu, X and Xu, X and Jackson, S and Powell, W and Nevo, E and Searle, I R and Lodha, M and Varshney, R K (2020) Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal (TSI). ISSN 1467-7644

Bayer Crop Sciences (Chesterfield)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Baylor College of Medicine (Houston)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Biotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences (Shandong)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Broad Institute of MIT and Harvard (Cambridge)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

CIMMYT(Mexico)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

CNR-Consiglio Nazionale delle Ricerche, Istituto di Biologia e Biotecnologia Agraria (Milan)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Centre for Cellular and Molecular Biology (CSIR), (Hyderabad)

Sinha, P and Singh, V K and Saxena, R K and Kale, S M and Li, Y and Garg, V and Meifang, T and Khan, A W and Kim, K D and Chitikineni, A and Saxena, K B and Sameer Kumar, C V and Liu, X and Xu, X and Jackson, S and Powell, W and Nevo, E and Searle, I R and Lodha, M and Varshney, R K (2020) Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal (TSI). ISSN 1467-7644

Chaudhary Charan Singh Haryana Agricultural University (Hisar)

Singh, S and Gupta, S K and Thudi, M and Das, R R and Anil Kumar, V and Garg, V and Varshney, R K and Rathore, A and Pahuja, S K and Yadav, D V (2018) Genetic Diversity Patterns and Heterosis Prediction Based on SSRs and SNPs in Hybrid Parents of Pearl Millet. Crop Science (TSI), 58 (6). pp. 2379-2390. ISSN 0011-183X

China National Gene Bank (CNGB) (Shenzhen)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

China National GeneBank (CNGB) (Shenzen)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

China National GeneBank (Shenzhen)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

China National GeneBank, BGI-Shenzhen (Shenzhen)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Chinese Academy of Agricultural Sciences (Beijing)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

College of Biosciences and Biotechnology, National Cheng Kung University (Tainan)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

College of Crop Sciences, Fujian Agriculture and Forestry University (Fuzhou)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

College of Food Science and Engineering, Qingdao Agricultural University (Qingdao)

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424

College of Life Science, National Tsing Hua University (Hsin Chu)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Cornell University (Ithaca)

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Cornell University (New York)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Cornell University, Biotechnology Building (Ithaca)

Kale, S M and Jaganathan, D and Ruperao, P and Chen, C and Punna, R and Kudapa, H and Thudi, M and Roorkiwal, M and Katta, M A V S K and Doddamani, D and Garg, V and Kavi Kishor, P B and Gaur, P M and Nguyen, H T and Batley, J and Edwards, D and Sutton, T and Varshney, R K (2015) Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.). Scientific Reports (15296). 01-14. ISSN 2045-2322

Cornell University, Ithaca (New York)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Crop Genetics and Breeding Research Unit, USDA-ARS (Tifton)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Crop Protection and Management Research Unit, USDA-Agricultural Research Service (Tifton)

Pandey, M K and Khan, A W and Singh, V K and Vishwakarma, M K and Shasidhar, Y and Kumar, V and Garg, V and Bhat, R S and Chitikineni, A and Janila, P and Guo, B and Varshney, R K (2017) QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.). Plant Biotechnology Journal. pp. 1-15. ISSN 1467-7644

Crops Research Institute, Guangdong Academy of Agricultural Sciences, South China Peanut Sub-Center of National Center of Oilseed Crops Improvement, Guangdong Key Laboratory for Crops Genetic Improvement (Guangzhou)

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424

Department of Biology, East Carolina University (Greenville)

Garg, V and Khan, A W and Kudapa, H and Kale, S M and Chitikineni, A and Qiwei, S and Sharma, M and Li, C and Zhang, B and Xin, L and Kavi Kishor, P B and Varshney, R K (2019) Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal (TSI), 17 (5). pp. 914-931. ISSN 1467-7644

Department of Biotechnology, University of Agricultural Sciences (Dharwad)

Pandey, M K and Khan, A W and Singh, V K and Vishwakarma, M K and Shasidhar, Y and Kumar, V and Garg, V and Bhat, R S and Chitikineni, A and Janila, P and Guo, B and Varshney, R K (2017) QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.). Plant Biotechnology Journal. pp. 1-15. ISSN 1467-7644

Department of Ecogenomics and Systems Biology, University of Vienna (Vienna)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Department of Genetics, Osmania University (Hyderabad)

Garg, V and Khan, A W and Kudapa, H and Kale, S M and Chitikineni, A and Qiwei, S and Sharma, M and Li, C and Zhang, B and Xin, L and Kavi Kishor, P B and Varshney, R K (2019) Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal (TSI), 17 (5). pp. 914-931. ISSN 1467-7644

Garg, V and Agarwal, G and Pazhamala, L T and Nayak, S N and Kudapa, H and Khan, A W and Doddamani, D and Sharma, M and Kavi Kishor, P B and Varshney, R K (2017) Genome-Wide Identification, Characterization, and Expression Analysis of Small RNA Biogenesis Purveyors Reveal Their Role in Regulation of Biotic Stress Responses in Three Legume Crops. Frontiers in Plant Science, 8 (488). pp. 1-16. ISSN 1664-462X

Singh, V K and Khan, A W and Jaganathan, D and Thudi, M and Roorkiwal, M and Takagi, H and Garg, V and Kumar, V and Chitikineni, A and Gaur, P M and Sutton, T and Terauchi, R and Varshney, R K (2016) QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal. pp. 2110-2119. ISSN 1467-7644

Kale, S M and Jaganathan, D and Ruperao, P and Chen, C and Punna, R and Kudapa, H and Thudi, M and Roorkiwal, M and Katta, M A V S K and Doddamani, D and Garg, V and Kavi Kishor, P B and Gaur, P M and Nguyen, H T and Batley, J and Edwards, D and Sutton, T and Varshney, R K (2015) Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.). Scientific Reports (15296). 01-14. ISSN 2045-2322

Department of Plant Biology, University of Illinois of Urbana-Champaign (Urbana)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Department of Plant Breeding and Biotechnology, Gorgan University of Agricultural Sciences and Natural Resources (Gorgan)

Mahdavi Mashaki, K and Garg, V and Ghomi, A A N and Kudapa, H and Chitikineni, A and Zaynali Nezhad, K and Yamchi, A and Soltanloo, H and Varshney, R K and Thudi, M (2018) RNA-Seq analysis revealed genes associated with drought stress response in kabuli chickpea (Cicer arietinum L.). PLoS ONE (TSI), 13 (6). pp. 1-17. ISSN 1932-6203

Egerton University (Njoro)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Ethiopian Institute of Agricultural Research (EIAR) (Debre Ziet)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Faculty of Sciences and Techniques, University Abdou Moumouni (Niamey)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Former Principal Scientist (ICRISAT); 17, NMC Housing, Al Ain, Abu Dhabi, UAE

Obala, J and Saxena, R K and Singh, V K and Kale, S M and Garg, V and Kumar, C V S and Saxena, K B and Tongoona, P and Sibiya, J and Varshney, R K (2020) Seed protein content and its relationships with agronomic traits in pigeonpea is controlled by both main and epistatic effects QTLs. Scientific Reports (TSI), 10 (1). pp. 1-17. ISSN 2045-2322

Fort Valley State University, Fort Valley (Georgia)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Fujian Agriculture and Forestry University (Fuzhou)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University (Fuzhou)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Graduate Program in Translational Agricultural Sciences, National Cheng Kung University and Academia Sinica (Taipei)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Guangdong Academy of Agricultural Sciences (Guangzhou)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University (Shenzhen)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Guangxi Academy of Agricultural Sciences (Nanning)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University (Fuzhou)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Henan Academy of Agricultural Sciences (Zhengzhou)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

ICAR–Indian Agricultural Research Institute (IARI) (New Delhi)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

ICAR–Indian Agricultural Research Institute (New Delhi)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

ICRISAT (Nairobi)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

ICRISAT (Niamey)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

ICRISAT (Patancheru)

Singh, S and Kudapa, H and Garg, V and Varshney, R K (2021) Comprehensive analysis and identification of drought-responsive candidate NAC genes in three semi-arid tropics (SAT) legume crops. BMC Genomics (TSI), 22 (1). pp. 1-23. ISSN 1471-2164

Khan, A W and Garg, V and Roorkiwal, M and Golicz, A A and Edwards, D and Varshney, R K (2020) Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement. Trends in Plant Science (TSI), 25 (2). pp. 148-158. ISSN 1360-1385

Sinha, P and Singh, V K and Saxena, R K and Kale, S M and Li, Y and Garg, V and Meifang, T and Khan, A W and Kim, K D and Chitikineni, A and Saxena, K B and Sameer Kumar, C V and Liu, X and Xu, X and Jackson, S and Powell, W and Nevo, E and Searle, I R and Lodha, M and Varshney, R K (2020) Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal (TSI). ISSN 1467-7644

Obala, J and Saxena, R K and Singh, V K and Kale, S M and Garg, V and Kumar, C V S and Saxena, K B and Tongoona, P and Sibiya, J and Varshney, R K (2020) Seed protein content and its relationships with agronomic traits in pigeonpea is controlled by both main and epistatic effects QTLs. Scientific Reports (TSI), 10 (1). pp. 1-17. ISSN 2045-2322

Garg, V and Khan, A W and Kudapa, H and Kale, S M and Chitikineni, A and Qiwei, S and Sharma, M and Li, C and Zhang, B and Xin, L and Kavi Kishor, P B and Varshney, R K (2019) Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal (TSI), 17 (5). pp. 914-931. ISSN 1467-7644

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Jain, A and Roorkiwal, M and Kale, S and Garg, V and Yadala, R and Varshney, R K (2019) InDel markers: An extended marker resource for molecular breeding in chickpea. PLoS ONE (TSI), 14 (3). pp. 1-13. ISSN 1932-6203

Singh, S and Gupta, S K and Thudi, M and Das, R R and Anil Kumar, V and Garg, V and Varshney, R K and Rathore, A and Pahuja, S K and Yadav, D V (2018) Genetic Diversity Patterns and Heterosis Prediction Based on SSRs and SNPs in Hybrid Parents of Pearl Millet. Crop Science (TSI), 58 (6). pp. 2379-2390. ISSN 0011-183X

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Mahdavi Mashaki, K and Garg, V and Ghomi, A A N and Kudapa, H and Chitikineni, A and Zaynali Nezhad, K and Yamchi, A and Soltanloo, H and Varshney, R K and Thudi, M (2018) RNA-Seq analysis revealed genes associated with drought stress response in kabuli chickpea (Cicer arietinum L.). PLoS ONE (TSI), 13 (6). pp. 1-17. ISSN 1932-6203

Kudapa, H and Garg, V and Chitikineni, A and Varshney, R K (2018) The RNA-Seq based high resolution gene expression atlas of chickpea (Cicer arietinum L.) reveals dynamic spatio-temporal changes associated with growth and development. Plant, Cell & Environment (TSI). pp. 1-17. ISSN 0140-7791

Vishwakarma, M K and Kale, S M and Sriswathi, M and Naresh, T and Shasidhar, Y and Garg, V and Pandey, M K and Varshney, R K (2017) Genome-Wide Discovery and Deployment of Insertions and Deletions Markers Provided Greater Insights on Species, Genomes, and Sections Relationships in the Genus Arachis. Frontiers in Plant Science, 8 (2064). pp. 1-13. ISSN 1664-462X

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Saxena, R K and Singh, V K and Kale, S M and Tathineni, R and Parupalli, S and Kumar, V and Garg, V and Das, R R and Sharma, M and Yamini, K N and Muniswamy, S and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Kishor, P B K and Varshney, R K (2017) Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea. Scientific Reports, 7 (1911). pp. 1-11. ISSN 2045-2322

Saxena, R K and Kale, S M and Kumar, V and Parupalli, S and Joshi, S and Singh, V K and Garg, V and Das, R R and Sharma, M and Yamini, K N and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Varshney, R K (2017) Genotyping-by-sequencing of three mapping populations for identification of candidate genomic regions for resistance to sterility mosaic disease in pigeonpea. Scientific Reports, 7 (1813). pp. 1-10. ISSN 2045-2322

Pazhamala, L T and Purohit, S and Saxena, R K and Garg, V and Krishnamurthy, L and Verdier, J and Varshney, R K (2017) Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation. Journal of Experimental Botany, 68 (8). pp. 2037-2054. ISSN 0022-0957

Garg, V and Agarwal, G and Pazhamala, L T and Nayak, S N and Kudapa, H and Khan, A W and Doddamani, D and Sharma, M and Kavi Kishor, P B and Varshney, R K (2017) Genome-Wide Identification, Characterization, and Expression Analysis of Small RNA Biogenesis Purveyors Reveal Their Role in Regulation of Biotic Stress Responses in Three Legume Crops. Frontiers in Plant Science, 8 (488). pp. 1-16. ISSN 1664-462X

Obala, J and Saxena, R K and Singh, V K and Kale, S M and Garg, V and Kumar, V and Sameer Kumar, C V and Tongoona, P and Sibiya, J and Saxena, K B and Varshney, R K (2017) Molecular mapping of seed protein content in pigeonpea – a drought tolerant crop of the semi-arid tropics. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Puppala, N and Xavier, A and Garg, V and Nayak, S N and Pandey, M K and Varshney, R K and Layland, N and Payton, P and Holbrook, C (2017) Next generation sequencing approaches for understanding genetic mechanism of drought tolerance in Valencia Peanut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Pazhamala, L T and Saxena, R K and Purohit, S and Bajaj, P and Kumar, V and Garg, V and Srikanth, S and Hingane, A J and Kulshreshtha, A and Krishnamurthy, L and Sameer Kumar, C V and Verdier, J and Varshney, R K (2017) Next generation sequencing based transcriptomic studies for crop improvement in pigeonpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Pandey, M K and Khan, A W and Singh, V K and Vishwakarma, M K and Shasidhar, Y and Kumar, V and Garg, V and Bhat, R S and Chitikineni, A and Janila, P and Guo, B and Varshney, R K (2017) QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.). Plant Biotechnology Journal. pp. 1-15. ISSN 1467-7644

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424

Singh, V K and Khan, A W and Jaganathan, D and Thudi, M and Roorkiwal, M and Takagi, H and Garg, V and Kumar, V and Chitikineni, A and Gaur, P M and Sutton, T and Terauchi, R and Varshney, R K (2016) QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal. pp. 2110-2119. ISSN 1467-7644

Thudi, M and Khan, A W and Kumar, V and Gaur, P M and Katta, K and Garg, V and Roorkiwal, M and Samineni, S and Varshney, R K (2016) Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.). BMC Plant Biology, 16 (10). pp. 53-64. ISSN 1471-2229

Agarwal, G and Garg, V and Kudapa, H and Doddamani, D and Pazhamala, L T and Khan, A W and Thudi, M and Lee, S H and Varshney, R K (2016) Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea. Plant Biotechnology Journal, 14 (07). pp. 1563-1577. ISSN 1467-7652

Kumar, V and Khan, A W and Saxena, R K and Garg, V and Varshney, R K (2016) First-generation HapMap in Cajanus spp. reveals untapped variations in parental lines of mapping populations. Plant Biotechnology Journal, 14 (08). pp. 1673-1681. ISSN 1467-7652

Singh, V K and Khan, A W and Saxena, R K and Kumar, V and Kale, S M and Sinha, P and Chitikineni, A and Pazhamala, L T and Garg, V and Sharma, M and Sameer Kumar, C V and Parupalli, S and Vechalapu, S and Patil, S and Muniswamy, S and Ghanta, A and Yamini, K N and Dharmaraj, P S and Varshney, R K (2016) Next-generation sequencing for identification of candidate genes for Fusarium wilt and sterility mosaic disease in pigeonpea (Cajanus cajan). Plant Biotechnology Journal, 14. pp. 1183-1194. ISSN 1467-7644

Ramalingam, A and Kudapa, H and Pazhamala, L T and Garg, V and Varshney, R K (2015) Gene Expression and Yeast Two-Hybrid Studies of 1R-MYB Transcription Factor Mediating Drought Stress Response in Chickpea (Cicer arietinum L.). Frontiers in Plant Science, 6 (1117). 01-10. ISSN 1664-462X

Kale, S M and Jaganathan, D and Ruperao, P and Chen, C and Punna, R and Kudapa, H and Thudi, M and Roorkiwal, M and Katta, M A V S K and Doddamani, D and Garg, V and Kavi Kishor, P B and Gaur, P M and Nguyen, H T and Batley, J and Edwards, D and Sutton, T and Varshney, R K (2015) Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.). Scientific Reports (15296). 01-14. ISSN 2045-2322

ICRISAT(Patancheru)

Garg, V and Chitikineni, A and Sharma, M and Ghosh, R and Samineni, S and Varshney, R K and Kudapa, H (2023) Transcriptome profiling reveals the expression and regulation of genes associated with Fusarium wilt resistance in chickpea (Cicer arietinum L.). The Plant Genome (TSI). 01-16. ISSN 1940-3372

Kudapa, H and Barmukh, R and Garg, V and Chitikineni, A and Samineni, S and Agarwal, G and Varshney, R K (2023) Comprehensive Transcriptome Profiling Uncovers Molecular Mechanisms and Potential Candidate Genes Associated with Heat Stress Response in Chickpea. International Journal of Molecular Sciences (TSI), 24 (2). pp. 1-20. ISSN 1422-0067

Barmukh, R and Roorkiwal, M and Garg, V and Khan, A W and German, L and Jaganathan, D and Chitikineni, A and Kholova, J and Kudapa, H and Samineni, S and Sivasakthi, K and Kale, S M and Gaur, P M and Sagurthi, S R and Benitez-Alfonso, Y and Varshney, R K (2022) Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea. Plant Biotechnology Journal, 20. pp. 1701-1715. ISSN 1467-7652

Garg, V and Varshney, R K (2022) Analysis of Small RNA Sequencing Data in Plants. In: Plant Bioinformatics Methods in Molecular Biology. Methods in Molecular Biology, III (2443). Humana, New York, pp. 497-509. ISBN 978-1-0716-2067-0

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Roorkiwal, M and Jarquin, D and Jain, A and Garg, V and Kale, S M and Singh, M K and Samineni, S and Gaur, P M and Rathore, A and Chellapilla, B and Tripathi, S and Crossa, J and Varshney, R K (2017) Genomic-enabled prediction model with genotype × environment interaction in elite chickpea lines. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

INRA - Research Institute in Horticulture and Seeds (IRHS) (Beaucouze)

Pazhamala, L T and Saxena, R K and Purohit, S and Bajaj, P and Kumar, V and Garg, V and Srikanth, S and Hingane, A J and Kulshreshtha, A and Krishnamurthy, L and Sameer Kumar, C V and Verdier, J and Varshney, R K (2017) Next generation sequencing based transcriptomic studies for crop improvement in pigeonpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

INRA - Research Institute in Horticulture and Seeds (IRHS)(Beaucouze)

Pazhamala, L T and Purohit, S and Saxena, R K and Garg, V and Krishnamurthy, L and Verdier, J and Varshney, R K (2017) Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation. Journal of Experimental Botany, 68 (8). pp. 2037-2054. ISSN 0022-0957

IPK Gatersleben (Gatersleben)

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Indian Agricultural Research Institute (Delhi)

Roorkiwal, M and Jarquin, D and Jain, A and Garg, V and Kale, S M and Singh, M K and Samineni, S and Gaur, P M and Rathore, A and Chellapilla, B and Tripathi, S and Crossa, J and Varshney, R K (2017) Genomic-enabled prediction model with genotype × environment interaction in elite chickpea lines. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Indian Agricultural Research Institute (IARI) (Delhi)

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Indian Council of Agricultural Research (ICAR) (New Delhi)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Indian Council of Agricultural Research (ICAR), Indian Institute of Pulses Research (IIPR) (Kanpur)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Indian Council of Agricultural Research (ICAR)—Central Arid Zone Research Institute (CAZRI) (Jodhpur)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Indian Council of Agricultural Research (New Delhi)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Indian Institute of Pulses Research (Kanpur)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Institut Sénégalais de Recherches Agricoles (ISRA) (Dakar)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Institut de Recherche pour le Développement (IRD), University of Montpellier (Montpellier)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Institut de Recherche pour le Développement (Montpellier)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Institut de recherche pour le développement (IRD) (Montpellier)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Institut des Mondes Africains (IMAf) (Paris)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Institute of Agriculture, The University of Western Australia (Crawley)

Agarwal, G and Garg, V and Kudapa, H and Doddamani, D and Pazhamala, L T and Khan, A W and Thudi, M and Lee, S H and Varshney, R K (2016) Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea. Plant Biotechnology Journal, 14 (07). pp. 1563-1577. ISSN 1467-7652

Institute of Biological, Environmental and Rural Sciences, Aberystwyth University (Ceredigion)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Institute of Biotechnology, Professor Jayshankar Telangana State Agricultural University (PJTSAU) (Hyderabad)

Singh, V K and Khan, A W and Saxena, R K and Kumar, V and Kale, S M and Sinha, P and Chitikineni, A and Pazhamala, L T and Garg, V and Sharma, M and Sameer Kumar, C V and Parupalli, S and Vechalapu, S and Patil, S and Muniswamy, S and Ghanta, A and Yamini, K N and Dharmaraj, P S and Varshney, R K (2016) Next-generation sequencing for identification of candidate genes for Fusarium wilt and sterility mosaic disease in pigeonpea (Cajanus cajan). Plant Biotechnology Journal, 14. pp. 1183-1194. ISSN 1467-7644

Institute of Biotechnology, Professor Jayshankar Telangana State Agricultural University (PJTSAU) (Rajendranagar)

Saxena, R K and Kale, S M and Kumar, V and Parupalli, S and Joshi, S and Singh, V K and Garg, V and Das, R R and Sharma, M and Yamini, K N and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Varshney, R K (2017) Genotyping-by-sequencing of three mapping populations for identification of candidate genomic regions for resistance to sterility mosaic disease in pigeonpea. Scientific Reports, 7 (1813). pp. 1-10. ISSN 2045-2322

International Center for Biosaline Agriculture (Dubai)

Garg, V and Chitikineni, A and Sharma, M and Ghosh, R and Samineni, S and Varshney, R K and Kudapa, H (2023) Transcriptome profiling reveals the expression and regulation of genes associated with Fusarium wilt resistance in chickpea (Cicer arietinum L.). The Plant Genome (TSI). 01-16. ISSN 1940-3372

International Centre for Agricultural Research in the Dry Areas (Cairo)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

International Centre for Agricultural Research in the Dry Areas (Rabat)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

International Maize and Wheat Improvement Center (CIMMYT) (Mexico)

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Roorkiwal, M and Jarquin, D and Singh, M K and Gaur, P M and Bharadwaj, C and Rathore, A and Howard, R and Srinivasan, S and Jain, A and Garg, V and Kale, S M and Chitikineni, A and Tripathi, S and Jones, E and Robbins, K R and Crossa, J and Varshney, R K (2018) Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea. Scientific Reports (TSI), 8 (1) (11701). pp. 1-11. ISSN 2045-2322

Roorkiwal, M and Jarquin, D and Jain, A and Garg, V and Kale, S M and Singh, M K and Samineni, S and Gaur, P M and Rathore, A and Chellapilla, B and Tripathi, S and Crossa, J and Varshney, R K (2017) Genomic-enabled prediction model with genotype × environment interaction in elite chickpea lines. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

International Rice Research Institute (Hyderabad)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

International Rice Research Institute, South-Asia Hub, (Patancheru)

Sinha, P and Singh, V K and Saxena, R K and Kale, S M and Li, Y and Garg, V and Meifang, T and Khan, A W and Kim, K D and Chitikineni, A and Saxena, K B and Sameer Kumar, C V and Liu, X and Xu, X and Jackson, S and Powell, W and Nevo, E and Searle, I R and Lodha, M and Varshney, R K (2020) Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal (TSI). ISSN 1467-7644

Iwate Biotechnology Research Center, Kitakami (Iwate)

Singh, V K and Khan, A W and Jaganathan, D and Thudi, M and Roorkiwal, M and Takagi, H and Garg, V and Kumar, V and Chitikineni, A and Gaur, P M and Sutton, T and Terauchi, R and Varshney, R K (2016) QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal. pp. 2110-2119. ISSN 1467-7644

James D. Watson Institute of Genome Science (Hangzhou)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Junagadh Agricultural University (Junagadh)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Junagadh Agricultural University, Jamnagar (Gujarat)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés aux Stress Environnementaux, Centre de Recherche de Bel Air (Dakar)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Laboratoire de biométrie et Biologie Evolutive, Université Lyon 1 (Villeurbanne)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) (Gatersleben)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) (Gatersleben)

Jain, A and Roorkiwal, M and Kale, S and Garg, V and Yadala, R and Varshney, R K (2019) InDel markers: An extended marker resource for molecular breeding in chickpea. PLoS ONE (TSI), 14 (3). pp. 1-13. ISSN 1932-6203

Lincoln University (Jefferson City)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Macrogen Millennium Genomics Company (Shenzhen)

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424

Max Planck Institute of Molecular Plant Physiology (Potsdam)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Michigan State University(East Lansing)

Kudapa, H and Barmukh, R and Garg, V and Chitikineni, A and Samineni, S and Agarwal, G and Varshney, R K (2023) Comprehensive Transcriptome Profiling Uncovers Molecular Mechanisms and Potential Candidate Genes Associated with Heat Stress Response in Chickpea. International Journal of Molecular Sciences (TSI), 24 (2). pp. 1-20. ISSN 1422-0067

Murdoch University (Murdoch)

Garg, V and Chitikineni, A and Sharma, M and Ghosh, R and Samineni, S and Varshney, R K and Kudapa, H (2023) Transcriptome profiling reveals the expression and regulation of genes associated with Fusarium wilt resistance in chickpea (Cicer arietinum L.). The Plant Genome (TSI). 01-16. ISSN 1940-3372

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Murdoch University(Murdoch)

Kudapa, H and Barmukh, R and Garg, V and Chitikineni, A and Samineni, S and Agarwal, G and Varshney, R K (2023) Comprehensive Transcriptome Profiling Uncovers Molecular Mechanisms and Potential Candidate Genes Associated with Heat Stress Response in Chickpea. International Journal of Molecular Sciences (TSI), 24 (2). pp. 1-20. ISSN 1422-0067

Barmukh, R and Roorkiwal, M and Garg, V and Khan, A W and German, L and Jaganathan, D and Chitikineni, A and Kholova, J and Kudapa, H and Samineni, S and Sivasakthi, K and Kale, S M and Gaur, P M and Sagurthi, S R and Benitez-Alfonso, Y and Varshney, R K (2022) Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea. Plant Biotechnology Journal, 20. pp. 1701-1715. ISSN 1467-7652

Myongji University, (Yongin)

Sinha, P and Singh, V K and Saxena, R K and Kale, S M and Li, Y and Garg, V and Meifang, T and Khan, A W and Kim, K D and Chitikineni, A and Saxena, K B and Sameer Kumar, C V and Liu, X and Xu, X and Jackson, S and Powell, W and Nevo, E and Searle, I R and Lodha, M and Varshney, R K (2020) Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal (TSI). ISSN 1467-7644

Nanyang Technological University (Singapore)

Pazhamala, L T and Saxena, R K and Purohit, S and Bajaj, P and Kumar, V and Garg, V and Srikanth, S and Hingane, A J and Kulshreshtha, A and Krishnamurthy, L and Sameer Kumar, C V and Verdier, J and Varshney, R K (2017) Next generation sequencing based transcriptomic studies for crop improvement in pigeonpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

National Institute of Plant Genome Research (New Delhi)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

New Mexico State University Agricultural Science Center (Clovis)

Puppala, N and Xavier, A and Garg, V and Nayak, S N and Pandey, M K and Varshney, R K and Layland, N and Payton, P and Holbrook, C (2017) Next generation sequencing approaches for understanding genetic mechanism of drought tolerance in Valencia Peanut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Nextomics Biosciences Institute (Wuhan)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

North China University of Science and Technology (Tangshan)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Oil Crops Research Institute of Chinese Academy of Agricultural Sciences (Wuhan)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences (Wuhan)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Oklahoma State University, Department of Biochemistry and Molecular Biology (Stillwater)

Kale, S M and Jaganathan, D and Ruperao, P and Chen, C and Punna, R and Kudapa, H and Thudi, M and Roorkiwal, M and Katta, M A V S K and Doddamani, D and Garg, V and Kavi Kishor, P B and Gaur, P M and Nguyen, H T and Batley, J and Edwards, D and Sutton, T and Varshney, R K (2015) Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.). Scientific Reports (15296). 01-14. ISSN 2045-2322

Oklahoma State University, Stillwater (Oklahoma)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Osmania University (Hyderabad)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Varshney, R K and Thudi, M and Roorkiwal, M and He, W and Upadhyaya, H D and Yang, W and Bajaj, P and Cubry, P and Rathore, A and Jian, J and Doddamani, D and Khan, A W and Garg, V and Chitikineni, A and Xu, D and Gaur, P M and Singh, N P and Chaturvedi, S K and Gangarao, N V P R and Krishnamurthy, L and Dixit, G P and Fikre, A and Kimurto, P K and Sreeman, S M and Bharadwaj, C and Tripathi, S and Wang, J and Lee, S H and Edwards, D and Kavi Kishor, P B and Penmetsa, R V and Crossa, J and Nguyen, H T and Siddique, K H M and Colmer, T D and Sutton, T and von Wettberg, E and Vigouroux, Y and Xu, X and Liu, X (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics (TSI), 51 (5). pp. 857-864. ISSN 1061-4036

Saxena, R K and Singh, V K and Kale, S M and Tathineni, R and Parupalli, S and Kumar, V and Garg, V and Das, R R and Sharma, M and Yamini, K N and Muniswamy, S and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Kishor, P B K and Varshney, R K (2017) Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea. Scientific Reports, 7 (1911). pp. 1-11. ISSN 2045-2322

Osmania University(Hyderabad)

Barmukh, R and Roorkiwal, M and Garg, V and Khan, A W and German, L and Jaganathan, D and Chitikineni, A and Kholova, J and Kudapa, H and Samineni, S and Sivasakthi, K and Kale, S M and Gaur, P M and Sagurthi, S R and Benitez-Alfonso, Y and Varshney, R K (2022) Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea. Plant Biotechnology Journal, 20. pp. 1701-1715. ISSN 1467-7652

Phoenix Bioinformatics, Redwood City (California)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Pioneer Hi-Bred Private Limited (Hyderabad)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

Plant Genome Mapping Laboratory, University of Georgia (Athens)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424

Plant Genomics and Breeding Institute, Seoul National University (Seoul)

Agarwal, G and Garg, V and Kudapa, H and Doddamani, D and Pazhamala, L T and Khan, A W and Thudi, M and Lee, S H and Varshney, R K (2016) Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea. Plant Biotechnology Journal, 14 (07). pp. 1563-1577. ISSN 1467-7652

Plant Molecular Biology and Biotechnology Laboratory, Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, Melbourne, VIC, Australia

Khan, A W and Garg, V and Roorkiwal, M and Golicz, A A and Edwards, D and Varshney, R K (2020) Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement. Trends in Plant Science (TSI), 25 (2). pp. 148-158. ISSN 1360-1385

Professor Jayashankar Telangana State Agricultural University (Rajendranagar)

Saxena, R K and Singh, V K and Kale, S M and Tathineni, R and Parupalli, S and Kumar, V and Garg, V and Das, R R and Sharma, M and Yamini, K N and Muniswamy, S and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Kishor, P B K and Varshney, R K (2017) Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea. Scientific Reports, 7 (1911). pp. 1-11. ISSN 2045-2322

Professor Jayashankar Telangana State Agricultural University, Rajendranagar, Hyderabad

Obala, J and Saxena, R K and Singh, V K and Kale, S M and Garg, V and Kumar, C V S and Saxena, K B and Tongoona, P and Sibiya, J and Varshney, R K (2020) Seed protein content and its relationships with agronomic traits in pigeonpea is controlled by both main and epistatic effects QTLs. Scientific Reports (TSI), 10 (1). pp. 1-17. ISSN 2045-2322

Rajasthan Agricultural Research Institute (Durgapura)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Rajmata Vijayaraje Scindia Krishi Vishwa Vidyalaya (Gwalior)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Rani Lakshmi Bai Central Agricultural University (Jhansi)

Varshney, R K and Roorkiwal, M and Sun, S and Bajaj, P and Chitikineni, A and Thudi, M and Singh, N P and Du, X and Upadhyaya, H D and Khan, A W and Wang, Y and Garg, V and Fan, G and Cowling, W A and Crossa, J and Gentzbittel, L and Voss-Fels, K P and Valluri, V K and Sinha, P and Singh, V K and Ben, C and Rathore, A and Punna, R and Singh, M K and Tar’an, B and Bharadwaj, C and Yasin, M and Pithia, M S and Singh, S and Soren, K R and Kudapa, H and Jarquín, D and Cubry, P and Hickey, L T and Dixit, G P and Thuillet, A and Hamwieh, A and Kumar, S and Deokar, A A and Chaturvedi, S K and Francis, A and Howard, R and Chattopadhyay, D and Edwards, D and Lyons, E and Vigouroux, Y and Hayes, B J and Wettberg, E v and Datta, S K and Yang, H and Nguyen, H T and Wang, J and Siddique, K H M and Mohapatra, T and Bennetzen, J L and Xu, X and Liu, X (2021) A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature, 599. pp. 622-627. ISSN 1476-4687

Research Institute for Agriculture and Life Sciences, Seoul National University (Seoul)

Agarwal, G and Garg, V and Kudapa, H and Doddamani, D and Pazhamala, L T and Khan, A W and Thudi, M and Lee, S H and Varshney, R K (2016) Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea. Plant Biotechnology Journal, 14 (07). pp. 1563-1577. ISSN 1467-7652

Rice University (Houston)

Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224

School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal (Pietermaritzburg)

Obala, J and Saxena, R K and Singh, V K and Kale, S M and Garg, V and Kumar, V and Sameer Kumar, C V and Tongoona, P and Sibiya, J and Saxena, K B and Varshney, R K (2017) Molecular mapping of seed protein content in pigeonpea – a drought tolerant crop of the semi-arid tropics. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

School of Agriculture and Environment, The University of Western Australia (Crawley)

Garg, V and Agarwal, G and Pazhamala, L T and Nayak, S N and Kudapa, H and Khan, A W and Doddamani, D and Sharma, M and Kavi Kishor, P B and Varshney, R K (2017) Genome-Wide Identification, Characterization, and Expression Analysis of Small RNA Biogenesis Purveyors Reveal Their Role in Regulation of Biotic Stress Responses in Three Legume Crops. Frontiers in Plant Science, 8 (488). pp. 1-16. ISSN 1664-462X

School of Agriculture, Food and Wine, The University of Adelaide (Adelaide)

Singh, V K and Khan, A W and Jaganathan, D and Thudi, M and Roorkiwal, M and Takagi, H and Garg, V and Kumar, V and Chitikineni, A and Gaur, P M and Sutton, T and Terauchi, R and Varshney, R K (2016) QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal. pp. 2110-2119. ISSN 1467-7644

School of Bioinformatics and Biotechnology, D.Y. Patil University (Mumbai)

Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156

School of Biological Sciences, The University of Western Australia (UWA), Crawley, WA, Australia

Khan, A W and Garg, V and Roorkiwal, M and Golicz, A A and Edwards, D and Varshney, R K (2020) Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement. Trends in Plant Science (TSI), 25 (2). pp. 148-158. ISSN 1360-1385

School of Life Science, TsingHua University (Beijing)

Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036

School of Plant Biology and Institute of Agriculture, The University of Western Australia (Crawley)

Saxena, R K and Singh, V K and Kale, S M and Tathineni, R and Parupalli, S and Kumar, V and Garg, V and Das, R R and Sharma, M and Yamini, K N and Muniswamy, S and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Kishor, P B K and Varshney, R K (2017) Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea. Scientific Reports, 7 (1911). pp. 1-11. ISSN 2045-2322

Saxena, R K and Kale, S M and Kumar, V and Parupalli, S and Joshi, S and Singh, V K and Garg, V and Das, R R and Sharma, M and Yamini, K N and Ghanta, A and Rathore, A and Sameer Kumar, C V and Saxena, K B and Varshney, R K (2017) Genotyping-by-sequencing of three mapping populations for identification of candidate genomic regions for resistance to sterility mosaic disease in pigeonpea. Scientific Reports, 7 (1813). pp. 1-10. ISSN 2045-2322

Pazhamala, L T and Saxena, R K and Purohit, S and Bajaj, P and Kumar, V and Garg, V and Srikanth, S and Hingane, A J and Kulshreshtha, A and Krishnamurthy, L and Sameer Kumar, C V and Verdier, J and Varshney, R K (2017) Next generation sequencing based transcriptomic studies for crop improvement in pigeonpea. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

Pandey, M K and Khan, A W and Singh, V K and Vishwakarma, M K and Shasidhar, Y and Kumar, V and Garg, V and Bhat, R S and Chitikineni, A and Janila, P and Guo, B and Varshney, R K (2017) QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.). Plant Biotechnology Journal. pp. 1-15. ISSN 1467-7644

Singh, V K and Khan, A W and Jaganathan, D and Thudi, M and Roorkiwal, M and Takagi, H and Garg, V and Kumar, V and Chitikineni, A and Gaur, P M and Sutton, T and Terauchi, R and Varshney, R K (2016) QTL‐seq for rapid identification of candidate genes for 100‐seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea. Plant Biotechnology Journal. pp. 2110-2119. ISSN 1467-7644

Kumar, V and Khan, A W and Saxena, R K and Garg, V and Varshney, R K (2016) First-generation HapMap in Cajanus spp. reveals untapped variations in parental lines of mapping populations. Plant Biotechnology Journal, 14 (08). pp. 1673-1681. ISSN 1467-7652

Singh, V K and Khan, A W and Saxena, R K and Kumar, V and Kale, S M and Sinha, P and Chitikineni, A and Pazhamala, L T and Garg, V and Sharma, M and Sameer Kumar, C V and Parupalli, S and Vechalapu, S and Patil, S and Muniswamy, S and Ghanta, A and Yamini, K N and Dharmaraj, P S and Varshney, R K (2016) Next-generation sequencing for identification of candidate genes for Fusarium wilt and sterility mosaic disease in pigeonpea (Cajanus cajan). Plant Biotechnology Journal, 14. pp. 1183-1194. ISSN 1467-7644

Ramalingam, A and Kudapa, H and Pazhamala, L T and Garg, V and Varshney, R K (2015) Gene Expression and Yeast Two-Hybrid Studies of 1R-MYB Transcription Factor Mediating Drought Stress Response in Chickpea (Cicer arietinum L.). Frontiers in Plant Science, 6 (1117). 01-10. ISSN 1664-462X

School of Plant Biology and Institute of Agriculture, University of Western Australia (Crawley)

Pazhamala, L T and Purohit, S and Saxena, R K and Garg, V and Krishnamurthy, L and Verdier, J and Varshney, R K (2017) Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation. Journal of Experimental Botany, 68 (8). pp. 2037-2054. ISSN 0022-0957

School of Plant Biology and the Institute of Agriculture, The University of Western Australia (UWA) (Crawley)

Roorkiwal, M and Jarquin, D and Jain, A and Garg, V and Kale, S M and Singh, M K and Samineni, S and Gaur, P M and Rathore, A and Chellapilla, B and Tripathi, S and Crossa, J and Varshney, R K (2017) Genomic-enabled prediction model with genotype × environment interaction in elite chickpea lines. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.

School of Plant Biology, University of Western Australia (Crawley)

Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424