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Khan, A W and Garg, V and Sun, S and Gupta, Saurabh and Dudchenko, O and Roorkiwal, M and Chitikineni, A and Bayer, P E and Shi, C and Upadhyaya, H D and Bohra, A and Bharadwaj, C and Mir, R R and Baruch, K and Yang, B and Coyne, C J and Bansal, K C and Nguyen, H T and Ronen, G and Aiden, E L and Veneklaas, E and Siddique, K H M and Liu, X and Edwards, D and Varshney, R K (2024) Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea. Nature Genetics (TSI). ISSN 1061-4036
Naik, Y D and Sharma, V K and Aski, M S and Rangari, S K and Kumar, Raj and Dikshit, H K and Sangita, S and Kant, R and Mishra, G and Mir, R R and Kudapa, H and Elango, D and Zwart, R S and Varshney, R K and Thudi, M (2024) Phenotypic profiling of lentil (Lens culinaris Medikus) accessions enabled identification of promising lines for use in breeding for high yield, early flowering and desirable traits. Plant Genetic Resources: Characterization and Utilization, 22 (2). pp. 69-77. ISSN 1479-2621
Garg, V and Barmukh, R and Chitikineni, A and Roorkiwal, M and Ojiewo, C and Bohra, A and Thudi, M and Singh, V K and Kudapa, H and Saxena, R K and Fountain, J and Mir, R R and Bharadwaj, C and Chen, X and Xin, L and Pandey, M K (2024) Celebrating Professor Rajeev K. Varshney's transformative research odyssey from genomics to the field on his induction as Fellow of the Royal Society. Plant Biotechnology Journal. pp. 1-12. ISSN 1467-7652
Pandey, M K and Mir, R R and Nese, S (2023) The Plant Genome special section: Grain quality and nutritional genomics for breeding next-generation crops. The Plant Genome (TSI), 16 (4). pp. 1-4. ISSN 1940-3372
Jan, S and Rustgi, S and Barmukh, R and Shikari, A B and Leske, B and Bekuma, A and Sharma, D and Ma, W and Kumar, U and Kumar, U and Bohra, A and Varshney, R K and Mir, R R (2023) Advances and opportunities in unraveling cold-tolerance mechanisms in the world’s primary staple food crops. The Plant Genome. pp. 1-23. ISSN 1940-3372
Jan, S and Kumar, S and Yousuf, M and Shafi, S and Majid, R and Khan, M A and Jeelani, F and Shikari, A B and Kaur, S and Kumar, S and Kalia, S and Singh, K and Prasad, M and Varshney, R K and Mir, R R (2023) Do diverse wheat genotypes unleash their biochemical arsenal differentially to conquer cold stress? A comprehensive study in the Western Himalayas. Physiologia Plantarum, 176 (1). ISSN 1399-3054
Kumar, R and Sharma, V K and Rangari, S K and Jha, U C and Sahu, A and Paul, P J and Gupta, S and Gangurde, S S and Kudapa, H and Mir, R R and Gaur, P M and Varshney, R K and Elango, D and Thudi, M (2023) High confidence QTLs and key genes identified using Meta-QTL analysis for enhancing heat tolerance in chickpea (Cicer arietinum L.). Frontiers in Plant Science (TSI), 14. 01-09. ISSN 1664-462X
Lokya, V and Parmar, S and Pandey, A K and Sudini, H K and Huai, D and Ozias-Akins, P and Foyer, C H and Nwosu, C V and Karpinska, B and Baker, A and Xu, P and Liao, B and Mir, R R and Chen, X and Guo, B and Nguyen, H T and Kumar, R and Bera, S K and Singam, P and Kumar, A and Varshney, R K and Pandey, M K (2023) Prospects for developing allergen-depleted food crops. The Plant Genome (TSI), 16 (4). pp. 1-32. ISSN 1940-3372
Rasool, B and Summuna, B and Djalovic, I and Shah, T A and Sheikh, P A and Gupta, S and Tyagi, S and Bilal, S and Varshney, R K and Abidi, I and Kumar, J and Penmetsa, R V and Khandey, I and Kumar, U and Sofi, P A and Khan, M A and Bhat, M A and Wani, F J and Thudi, M and Mir, R R (2023) Delineating Marker-Trait Associations for Fusarium Wilt in Chickpea Using the Axiom® CicerSNP Array. Phytopathology, 113 (5). ISSN 1943-7684
Gangurde, S S and Xavier, A and Naik, Y D and Jha, U C and Rangari, S K and Kumar, R and Reddy, M S S and Channale, S and Elango, D and Mir, R R and Zwart, R and Laxuman, C and Sudini, H K and Pandey, M K and Punnuri, S and Mendu, V and Reddy, U K and Guo, B and Gangarao, N V P R and Sharma, V K and Wang, X and Zhao, C and Thudi, M (2022) Two decades of association mapping: Insights on disease resistance in major crops. Frontiers in Plant Science (TSI), 13. 01-22. ISSN 1664-462X
Mir, R R and Kudapa, H and Pramod, S and Lewis, R S (2022) Editorial: Biotechnological and genomic approaches for enhancing agronomic performance of crops. Frontiers in Genetics (TSI), 13. 01-08. ISSN 1664-8021
Fayaz, H and Tyagi, S and Wani, A A and Pandey, R and Akhtar, S and Bhat, M A and Chitikineni, A and Varshney, R K and Thudi, M and Kumar, U and Mir, R R (2022) Genome‑wide association analysis to delineate high‑quality SNPs for seed micronutrient density in chickpea (Cicer arietinum L.). Scientific Reports, 12. 01-14. ISSN 2045-2322
Mir, A H and Bhat, M A and Fayaz, H and Wani, A A and Dar, S A and Maqbool, S and Yasin, M and Mir, J I and Khan, M A and Sofi, P A and El‑Sappah, A H and Thudi, M and Varshney, R K and Mir, R R (2022) SSR markers in revealing extent of genetic diversity and phylogenetic relationships among chickpea core collection accessions for Western Himalayas. Molecular Biology Reports, 49. pp. 11469-11479. ISSN 1573-4978
Vikas, V K and Pradhan, A K and Budhlakoti, N and Mishra, D C and Chandra, T and Bhardwaj, S C and Kumar, S and Sivasamy, M and Jayaprakash, P and Nisha, R and Shajitha, P and Peter, J and Geetha, M and Mir, R R and Singh, K and Kumar, S (2022) Multi-locus genome-wide association studies (ML-GWAS) reveal novel genomic regions associated with seedling and adult plant stage leaf rust resistance in bread wheat (Triticum aestivum L.). Heredity, 128. pp. 434-449. ISSN 1365-2540
Kulwal, P L and Mir, R R and Varshney, R K (2022) Cytogenetics to functional genomics: six decades journey of Professor P.K. Gupta. Plant Biotechnology Journal, 20. pp. 1021-1030. ISSN 1467-7652
Mir, R R and Choudhary, N and Bawa, V and Jan, S and Singh, B and Bhat, M A and Paliwal, R and Kumar, A and Chitikineni, A and Thudi, M and Varshney, R K (2021) Allelic Diversity, Structural Analysis, and Genome-Wide Association Study (GWAS) for Yield and Related Traits Using Unexplored Common Bean (Phaseolus vulgaris L.) Germplasm From Western Himalayas. Frontiers in Genetics, 11. pp. 1-17. ISSN 1664-8021
Saxena, R K and Kale, S and Mir, R R and Mallikarjuna, N and Yadav, P and Das, R R and Molla, J and Sonnappa, M and Ghanta, A and Narasimhan, Y and Rathore, A and Kumar, C V S and Varshney, R K (2019) Genotyping-by-sequencing and multilocation evaluation of two interspecific backcross populations identify QTLs for yield-related traits in pigeonpea. Theoretical and Applied Genetics (TSI), 133 (3). pp. 737-749. ISSN 0040-5752
Choudhary, N and Bawa, V and Paliwal, R and Singh, B and Bhat, M A and Mir, J I and Gupta, M and Sofi, P A and Thudi, M and Varshney, R K and Mir, R R (2018) Gene/QTL discovery for Anthracnose in common bean (Phaseolus vulgaris L.) from North-western Himalayas. PLoS ONE, 13 (2). pp. 1-12. ISSN 1932-6203
Mir, R R and Kudapa, H and Srikanth, S and Saxena, R K and Sharma, A and Azam, S and Saxena, K B and Penmetsa, R V and Varshney, R K (2014) Candidate gene analysis for determinacy in pigeonpea (Cajanus spp.). Theoretical and Applied Genetics, 127 (12). pp. 2663-2678. ISSN 0040-5752
Thudi, M and Gaur, P M and Krishnamurthy, L and Mir, R R and Kudapa, H and Fikre, A and Kimurto, P and Tripathi, S and Soren, K R and Mulwa, R and Bharadwaj, C and Datta, S and Chaturvedi, S K and Varshney, R K (2014) Genomics-assisted breeding for drought tolerance in chickpea. Functional Plant Biology. pp. 1-13. ISSN 1445-4408
Varshney, R K and Mir, R R and Bhatia, S and Thudi, M and Hu, Yukin and Azam, S and Zang, Y and Jaganathan, D and You, F M and Gao, J and Riera-Lizarazu, O and Luo, M (2014) Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.). Functional & Integrative Genomics, 14 (1). pp. 59-73. ISSN 1438-7948
Mir, R R and Saxena, R K and Saxena, K B and Upadhyaya, H D and Kilian, A and Cook, D R and Varshney, R K (2013) Whole-genome scanning for mapping determinacy in Pigeonpea (Cajanus spp.). Plant Breeding, 132 (5). pp. 472-478. ISSN 1439-0523
Mir, R R and Kumar, N and Jaiswal, V and Girdharwal, N and Prasad, M and Balyan, H S and Gupta, P K (2012) Genetic dissection of grain weight in bread wheat through quantitative trait locus interval and association mapping. Molecular Breeding, 29 (4). pp. 963-972. ISSN 1380-3743
Mir, R R and Zaman-Allah, M and Sreenivasulu, N and Trethowan, R and Varshney, R K (2012) Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops. TAG Theoretical and Applied Genetics, 125 (4). pp. 625-645. ISSN 1432-2242
Mir, R R and Kumar, J and Balyan , H S and Gupta, P K (2012) A study of genetic diversity among Indian bread wheat (Triticum aestivum L.) cultivars released during last 100 years. Genetic Resources and Crop Evolution, 59 (5). pp. 717-726. ISSN 1573-5109
Ravi, K and Vadez, V and Isobe, S and Mir, R R and Guo, Y and Nigam, S N and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Varshney, R K (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.). Theoretical and Applied Genetics, 122 (6). pp. 1119-1132. ISSN 0040-5752
Ravi, K and Vadez, V and Isobe, S and Mir, R R and Guo, Y and Nigam, S N and Gowda, M V C and Radhakrishnan, T and Bertioli, D J and Knapp, S J and Varshney, R K (2011) Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 122 (6). pp. 1119-1132. ISSN 1432-2242
Kumar, J and Jaiswal, V and Kumar, A and Kumar, N and Mir, R R and et al, . (2011) Introgression of a major gene for high grain protein content in some indian bread wheat cultivars. Field Crops Research, 123 (3). pp. 226-233. ISSN 0378-4290
Mir, R R and Rather, I A and Bhat, M A and Parray, G A and Varshney, R K (2017) Molecular Mapping of Genes and QTLs in Pigeonpea. In: The Pigeonpea Genome. Compendium of Plant Genomes book series (CPG) . Springer, pp. 55-64. ISBN 978-3-319-63795-2
Mir, R R and Hiremath, P J and Riera-Lizarazu, O and Varshney, R K (2013) Evolving Molecular Marker Technologies in Plants: From RFLPs to GBS. In: Diagnostics in Plant Breeding. Springer Science+Business, New York, pp. 229-247. ISBN 978-94-007-5686-1 ;978-94-007-5687-8 (eBook)
Mir, R R and Varshney, R K (2012) Future Prospects of Molecular Markers in Plants. In: Molecular Markers in Plants. Blackwell Publishing Ltd, Oxford, UK. , pp. 169-190. ISBN 9781118473023
Mir, R R and Thudi, M and Chamarthi, S K and Krishnamurthy, L and Gaur, P M and Varshney, R K (2012) Translational Root Genomics for Crop Improvement. In: Root Genomics and Soil Interactions. John Wiley & Sons, Inc., USA, pp. 249-264. ISBN 9781118447093
Burstin, J and Gallardo, K and Mir, R R and Varshney, R K and Duc, G (2011) Improving protein content and nutrition quality. In: Biology and Breeding of Food Legumes. CAB International, Wallingford, UK, pp. 314-328. ISBN 9781845937669