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Achola, E and Wasswa, P and Fonceka, D and Clevenger, J P and Bajaj, P and Ozias‑Akins, P and Rami, J and Deom, C M and Hoisington, D A and Edema, R and Odeny, D A and Okello, D K (2023) Genome‑wide association studies reveal novel loci for resistance to groundnut rosette disease in the African core groundnut collection. Theoretical and Applied Genetics, 136. pp. 1-20. ISSN 1432-2242
Benitez-Alfonso, Y and Soanes, B K and Zimba, S and Sinanaj, B and German, L and Sharma, V and Bohra, A and Kolesnikova, A and Dunn, J A and Martin, A C and Rahman, M K and Saati-Santamaria, Z and Garcia-Fraile, P and Ferreira, E A and Frazao, L A and Cowling, W A and Siddique, K H M and Pandey, M K and Farooq, M and Varshney, R K and Chapman, M A and Boesch, C and Daszkowska-Golec, A and Foyer, C H (2023) Enhancing climate change resilience in agricultural crops. Current Biology, 33. R1246-R1261. ISSN 1879-0445
Chauhan, C and Thakur, A and Sharma, V and Yadav, R R and Sivakumar, K B and Kumar, R and Verma, S K and Panwar, R K (2023) Proteomics as a tool for analyzing plant responses to abiotic and biotic stresses. In: Genomics, Transcriptomics, Proteomics and Metabolomics of Crop Plants presents current operational methods applied to model crop plants. Plant Biology, Sustainability and Climate Change . Elsevier, A, pp. 35-68. ISBN 978-0-323-95989-6
Dutta, B and Halder, U and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Delving into the lifestyle of Sundarban Wetland resident, biofilm producing, halotolerant Salinicoccus roseus: a comparative genomics-based intervention. BMC Genomics (TSI), 24. pp. 1-15. ISSN 1471-2164
Fernandez, C G T and Bayer, P E and Petereit, J and Varshney, R K and Batley, J and Edwards, D (2023) The conservation of gene models can support genome annotation. The Plant Genome (TSI), 16 (3). pp. 1-7. ISSN 1940-3372
Gangurde, S S and Pasupuleti, J and Parmar, S and Variath, M T and Bomireddy, D and Manohar, S S and Varshney, R K and Singam, P and Guo, B and Pandey, M K (2023) Genetic mapping identifies genomic regions and candidate genes for seed weight and shelling percentage in groundnut. Frontiers in Genetics (TSI), 14. 01-15. ISSN 1664-8021
Ghosh, S and Palika, R and Dasi, T and Varshney, R K and Parasannanavar, D J and Gupta, S S and Chitikineni, A and Banjara, S K and Pullakhandam, R and Thomas, T and Sachdev, H S and Kurpad, A V and Kulkarni, B (2023) Haemoglobin diagnostic cut-offs for anaemia in Indian women of reproductive age. European Journal of Clinical Nutrition, 77. pp. 966-971. ISSN 1476-5640
Halder, U and Biswas, R and Shaw, R and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Genome-based characterization of the deep-sea psychrotolerant bacterium Bacillus altitudinis SORB11 isolated from the Indian Sector of the Southern Ocean. Polar Biology. ISSN 1432-2056
Halder, U and Biswas, R and Shaw, R and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Genome-based characterization of the deep-sea psychrotolerant bacterium Bacillus altitudinis SORB11 isolated from the Indian Sector of the Southern Ocean. Polar Biology, 47. pp. 115-133. ISSN 0722-4060
Huai, D and Wu, J and Xue, X and Hu, M and Zhi, C and Pandey, M K and Liu, N and Huang, L and Bai, D and Yan, L and Chen, Y and Wang, X and Kang, Y and Wang, Z and Jiang, H and Lei, Y and Varshney, R K and Liao, B (2023) Red fluorescence protein (DsRed2) promotes the screening efficiency in peanut genetic transformation. Frontiers in Plant Science (TSI), 14. 01-11. ISSN 1664-462X
Jan, S and Rustgi, S and Barmukh, R and Shikari, A B and Leske, B and Bekuma, A and Sharma, D and Ma, W and Kumar, U and Kumar, U and Bohra, A and Varshney, R K and Mir, R R (2023) Advances and opportunities in unraveling cold-tolerance mechanisms in the world’s primary staple food crops. The Plant Genome. pp. 1-23. ISSN 1940-3372
Joshi, D C and Sood, S and Kudapa, H and Zhou, M and Santra, D (2023) Editorial: Trait mining and genetic enhancement of millets and potential crops: modern prospects for ancient grains. Frontiers in Plant Science (TSI), 14. 01-03. ISSN 1664-462X
Kabiraj, A and Halder, U and Panja, A S and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Detailed genomic and biochemical characterization and plant growth promoting properties of an arsenic-tolerant isolate of Bacillus pacificus from contaminated groundwater of West Bengal, India. Biocatalysis and Agricultural Biotechnology (TSI), 52. ISSN 1878-8181
Kudapa, H and Barmukh, R and Garg, V and Chitikineni, A and Samineni, S and Agarwal, G and Varshney, R K (2023) Comprehensive Transcriptome Profiling Uncovers Molecular Mechanisms and Potential Candidate Genes Associated with Heat Stress Response in Chickpea. International Journal of Molecular Sciences (TSI), 24 (2). pp. 1-20. ISSN 1422-0067
Kudapa, H and Barmukh, R and Vemuri, H and Gorthy, S and Pinnamaneni, R and Vetriventhan, M and Srivastava, R K and Joshi, P and Habyarimana, E and Gupta, S K and Govindaraj, M (2023) Genetic and genomic interventions in crop biofortification: Examples in millets. Frontiers in Plant Science (TSI), 14. pp. 1-15. ISSN 1664-462X
Kudapa, H and Ghatak, A and Barmukh, R and Chaturvedi, P and Khan, A and Kale, S and Fragner, L and Chitikineni, A and Weckwerth, W and Varshney, R K (2023) Integrated multi-omics analysis reveals drought stress response mechanism in chickpea (Cicer arietinum L.). The Plant Genome (TSI), SE. pp. 1-17. ISSN 1940-3372
Kumar, M and Prusty, M R and Pandey, M K and Singh, P K and Bohra, A and Guo, B and Varshney, R K (2023) Application of CRISPR/Cas9-mediated gene editing for abiotic stress management in crop plants. Frontiers in Plant Science (TSI), 14. 01-22. ISSN 1664-462X
Let, M and Majhi, K and Halder, U and De, A and Saha, D and Chitikineni, A and Roychowdhury, T and Varshney, R K and Bandopadhyay, R (2023) Exploration of urease-mediated biomineralization for defluoridation by Proteus columbae MLN9 with an emphasis on its genomic characterization. Journal of Environmental Chemical Engineering, 11 (3). ISSN 2213-3437
Lokya, V and Parmar, S and Pandey, A K and Sudini, H K and Huai, D and Ozias-Akins, P and Foyer, C H and Nwosu, C V and Karpinska, B and Baker, A and Xu, P and Liao, B and Mir, R R and Chen, X and Guo, B and Nguyen, H T and Kumar, R and Bera, S K and Singam, P and Kumar, A and Varshney, R K and Pandey, M K (2023) Prospects for developing allergen-depleted food crops. The Plant Genome (TSI), 16 (4). pp. 1-32. ISSN 1940-3372
Magar, N D and Shah, P and Barbadikar, K M and Bosamia, T C and Madhav, M S and Mangrauthia, S K and Pandey, M K and Sharma, Shailendra and Shanker, A K and Neeraja, C N and Sundaram, R M (2023) Long non-coding RNA-mediated epigenetic response for abiotic stress tolerance in plants. Plant Physiology and Biochemistry, 206. pp. 1-21. ISSN 0981-9428
Majhi, K and Let, M and Halder, U and Chitikineni, A and Varshney, R K and Bandopadhyay, R (2023) Copper removal capability and genomic insight into the lifestyle of copper mine inhabiting Micrococcus yunnanensis GKSM13. Environmental Research (TSI), 223. ISSN 0013-9351
Mallikarjuna, M G and Pandey, M K and Sharma, R and Clevenger, J and Bhattacharya, S (2023) Editorial: Application of network-theoretic approaches in biology. Frontiers in Genetics (TSI), 14. 01-03. ISSN 1664-8021
Mammadova, R and Amri, A and Akparov, Z and Alo, F Y and Sheikhzamanova, F and Abbasov, M and Amrahov, N and Hajiyev, E and Alizade, S (2023) Evaluation of genetic diversity using SSR markers and link with drought response of Azerbaijani durum wheat (Triticum durum Desf.) genotypes. Genetic Resources and Crop Evolution. ISSN 1573-5109
Pamala, P J and Jayalakshmi, R S and Vemana, K and Naidu, G M and Varshney, R K and Sudini, H K (2023) Prevalence of groundnut dry root rot (Macrophomina phaseolina (Tassi) Goid.) and its pathogenic variability in Southern India. Frontiers in Fungal Biology, 4. 01-16. ISSN 2673-6128
Pandey, M K and Mir, R R and Nese, S (2023) The Plant Genome special section: Grain quality and nutritional genomics for breeding next-generation crops. The Plant Genome (TSI), 16 (4). pp. 1-4. ISSN 1940-3372
Puppala, N and Nayak, S N and Sanz-Saez, A and Chen, C and Devi, M J and Nivedita, N and Bao, Y and He, G and Traore, S M and Wright, D A and Pandey, M K and Sharma, V (2023) Sustaining yield and nutritional quality of peanuts in harsh environments: Physiological and molecular basis of drought and heat stress tolerance. Frontiers in Genetics (TSI), 14. 01-24. ISSN 1664-8021
Ramu, P and Srivastava, R K and Sanyal, A and Fengler, K and Cao, J and Zhang, Y and Nimkar, M and Gerke, J and Shreedharan, S and Llaca, V and May, G and Peterson-Burch, B and Lin, H and King, M and Das, S and Bhupesh, V and Mandaokar, A and Maruthachalam, K and Krishnamurthy, P and Gandhi, H and Rathore, A and Gupta, R and Chitikineni, A and Bajaj, P and Gupta, S K and Satyavathi, C T and Pandravada, A and Varshney, R K and Babu, R (2023) Improved pearl millet genomes representing the global heterotic pool offer a framework for molecular breeding applications. Communications Biology, 6. 01-11. ISSN 2399-3642
Rasool, B and Summuna, B and Djalovic, I and Shah, T A and Sheikh, P A and Gupta, S and Tyagi, S and Bilal, S and Varshney, R K and Abidi, I and Kumar, J and Penmetsa, R V and Khandey, I and Kumar, U and Sofi, P A and Khan, M A and Bhat, M A and Wani, F J and Thudi, M and Mir, R R (2023) Delineating Marker-Trait Associations for Fusarium Wilt in Chickpea Using the Axiom® CicerSNP Array. Phytopathology, 113 (5). ISSN 1943-7684
Ruperao, P and Rangan, P and Shah, T and Thakur, V and Kalia, S and Mayes, S and Rathore, A (2023) The Progression in Developing Genomic Resources for Crop Improvement. Life, 13 (8). 01-28. ISSN 2075-1729
Saeed, F and Chaudhry, U K and Raza, A and Charagh, S and Bakhsh, A and Bohra, A and Ali, S and Chitikineni, A and Saeed, Y and Visser, R G F and Siddique, K H M and Varshney, R K (2023) Developing future heat‑resilient vegetable crops. Functional & Integrative Genomics, 23. pp. 1-23. ISSN 1438-7948
Sharma, N and Raman, H and Wheeler, D and Kalenahalli, Y and Sharma, R (2023) Data-driven approaches to improve water-use efficiency and drought resistance in crop plants. Plant Science (TSI), 336. ISSN 0168-9452
Sharma, V and Gangurde, S S and Nayak, S N and Gowda, A S and Sukanth, B S and Mahadevaiah, S S and Manohar, S S and Choudhary, R S and Anitha, T and Malavalli, S S and Srikanth, S N and Bajaj, P and Sharma, S and Varshney, R K and Latha, P and Janila, P and Bhat, R S and Pandey, M K (2023) Genetic mapping identified three hotspot genomic regions and candidate genes controlling heat tolerance-related traits in groundnut. Frontiers in Plant Science (TSI), 14. 01-21. ISSN 1664-462X
Sharma, V and Prakash, N R and Kumar, A (2023) Molecular Breeding Approaches for Biofortification of Cereal Crops. In: Biofortification in Cereals Progress and Prospects. Biofortification in Cereals . Springer Nature, Switzerland, pp. 59-91. ISBN 978-981-19-4307-2
Sun, M and Yan, H and Zhang, A and Jin, Y and Lin, C and Luo, L and Wu, B and Fan, Y and Tian, S and Cao, X and Wang, Z and Luo, J and Yang, Y and Jia, J and Zhou, P and Tang, Q and Jones, C S and Varshney, R K and Srivastava, R K and He, M and Xie, Z and Wang, X and Feng, G and Nie, G and Huang, D and Zhang, X and Zhu, F and Huang, L (2023) Milletdb: a multi-omics database to accelerate the research of functional genomics and molecular breeding of millets. Plant Biotechnology Journal, 21. pp. 2348-2357. ISSN 1467-7652
Susmitha, P and Kumar, P and Yadav, P and Sahoo, S and Kaur, G and Pandey, M K and Singh, V and Tseng, T M and Gangurde, S S (2023) Genome-wide association study as a powerful tool for dissecting competitive traits in legumes. Frontiers in Plant Science (TSI), 14. 01-20. ISSN 1664-462X
Thudi, M and Samineni, S and Li, W and Boer, M P and Roorkiwal, M and Yang, Z and Ladejobi, F and Zheng, C and Chitikineni, A and Nayak, S and He, Z and Valluri, V K and Bajaj, P and Khan, A W and Gaur, P M and Eeuwijk, F v and Mott, R and Xin, L and Varshney, R K (2023) Whole genome resequencing and phenotyping of MAGIC population for high resolution mapping of drought tolerance in chickpea. The Plant Genome (TSI). pp. 1-16. ISSN 1940-3372
Yu, B and Liu, N and Huang, L and Luo, H and Zhou, X and Lei, Y and Yan, L and Wang, X and Chen, W and Kang, Y and Ding, Y and Jin, G and Pandey, M K and Janila, P and Sudini, H K and Varshney, R K and Jiang, H and Liu, S and Liao, B (2023) Identification and application of a candidate gene AhAftr1 for aflatoxin production resistance in peanut seed (Arachis hypogaea L.). Journal of Advanced Research. pp. 1-12. ISSN 2090-1232
Zhang, C and Xie, W and Fu, H and Chen, Y and Chen, H and Cai, T and Yang, Q and Zhuang, Y and Zhong, X and Chen, K and Gao, M and Liu, F and Wan, Y and Pandey, M K and Varshney, R K and Zhuang, W (2023) Whole genome resequencing identifies candidate genes and allelic diagnostic markers for resistance to Ralstonia solanacearum infection in cultivated peanut (Arachis hypogaea L.). Frontiers in Plant Science (TSI), 13. 01-28. ISSN 1664-462X