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Chen, X and Zhu, W and Azam, S and Li, H and Zhu, F and Li, H and Hong, Y and Liu, H and Zhang, E and Wu, H and Yu, S and Zhou, G and Li, S and Zhong, N and Wen, S and Li, X and Knapp, S J and Ozias-Akins, P and Varshney, R K and Liang, X (2013) Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion. Plant Biotechnology Journal, 11 (1). pp. 115-127.
Kudapa, H and Ramalingam, A and Nayakoti, S and Chen, X and Zhuang, W and Liang, X and Kahl, G and Edwards, D. and Varshney, R K (2013) Functional genomics to study stress responses in crop legumes: progress and prospects. Functional Plant Biology, 14 (12). pp. 1221-1233. ISSN 1445-4408
Liu, Z and Feng, S and Pandey, M K and Chen, X and Culbreath, A K and Varshney, R K and Guo, B (2013) Identification of expressed resistance gene analogs from peanut (Arachis hypogaea L.) expressed sequence tags. Journal of Integrative Plant Biology, 55 (5). pp. 453-461. ISSN 1744-7909 (In Press)
Zhu, W and Chen, X and Li, H and Zhu, F and Hong, Y and Varshney, R K and Liang, X (2014) Comparative transcriptome analysis of aerial and subterranean pods development provides insights into seed abortion in peanut. Plant Molecular Biology, 85 (4-5). pp. 395-409. ISSN 1573-5028
Zhu, F and Han, J and Liu, S and Chen, X and Varshney, R K and Liang, X (2014) Cloning, Expression Pattern Analysis and Subcellular Localization of Resveratrol Synthase Gene in Peanut (Arachis hypogaea L.). American Journal of Plant Sciences, 5 (24). pp. 3619-3631. ISSN 2158-2750
Hong, Y and Pandey, M K and Liu, Y and Chen, X and Liu, H and Varshney, R K and Liang, X and Huang, S (2015) Identification and Evaluation of Single-Nucleotide Polymorphisms in Allotetraploid Peanut (Arachis hypogaea L.) Based on Amplicon Sequencing Combined with High Resolution Melting (HRM) Analysis. Frontiers in Plant Science, 06 (1068). 01-10. ISSN 1664-462X
Chen, X and Yang, Y and Li, H and Li, H and Hong, Y and Pan, L and Chen, N and Zhu, F and Chi, X and Zhu, W and Chen, M and Liu, H and Yang, Z and Zhang, E and Wang, T and Zhong, N and Wang, M and Liu, H and Wen, S and Li, X and Zhou, G and Li, S and Wu, H and Varshney, R K and Liang, X and Yu, S (2016) Transcriptome-wide sequencing provides insights into geocarpy in peanut (Arachis hypogaea L.). Plant Biotechnology Journal, 14 (05). pp. 1215-1224. ISSN 1467-7652
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut. Scientific Reports, 7. pp. 1-10. ISSN 2045-2322
Pandey, M K and Agarwal, G and Kale, S M and Clevenger, J and Nayak, S N and Sriswathi, M and Chitikineni, A and Chavarro, C and Chen, X and Upadhyaya, H D and Vishwakarma, M K and Leal-Bertioli, S and Liang, X and Bertioli, D J and Guo, B and Jackson, S A and Ozias-Akins, P and Varshney, R K (2017) The first high density genotyping ‘Axiom_Arachis’ 58K SNPs array for genetic studies and molecular breeding in groundnut. In: InterDrought-V, February 21-25, 2017, Hyderabad, India.
Lu, Q and Li, H and Hong, Y and Zhang, G and Wen, S and Li, X and Zhou, G and Li, S and Liu, H and Liu, H and Liu, Z and Varshney, R K and Chen, X and Liang, X (2018) Genome Sequencing and Analysis of the Peanut B-Genome Progenitor (Arachis ipaensis). Frontiers in Plant Science (TSI), 9 (604). pp. 1-15. ISSN 1664-462X
Pandey, M K and Kumar, R and Pandey, A K and Soni, P and Gangurde, S S and Sudini, H K and Fountain, J G and Liao, B and Desmae, H and Okori, P and Chen, X and Jiang, H and Mendu, V and Falalou, H and Njoroge, S and Mwololo, J K and Guo, B and Zhuang, W and Wang, X and Liang, X and Varshney, R K (2019) Mitigating Aflatoxin Contamination in Groundnut through A Combination of Genetic Resistance and Post-Harvest Management Practices. Toxins (TSI), 11(6) (315). pp. 1-21. ISSN 2072-6651
Chen, X and Lu, Q and Liu, H and Zhang, J and Hong, Y and Lan, H and Li, H and Wang, J and Liu, H and Li, S and Pandey, M K and Zhang, Z and Zhou, G and Yu, J and Zhang, G and Yuan, J and Li, X and Wen, S and Meng, F and Yu, S and Wang, X and Siddique, K H M and Liu, Z J and Paterson, A H and Varshney, R K and Liang, X (2019) Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement. Molecular Plant (TSI), 12 (7). pp. 920-934. ISSN 16742052
Song, B and Song, Y and Fu, Y and Kizito, E B and Kamenya, S N and Kabod, P N and Liu, H and Muthemba, S and Kariba, R and Njuguna, J and Maina, S and Stomeo, F and Djikeng, A and Hendre, P S and Chen, X and Chen, W and Li, X and Sun, W and Wang, W and Cheng, S and Muchugi, A and Jamnadass, R and Shapiro, H Y and Van Deynze, A and Yang, H and Wang, J and Xu, X and Odeny, D A and Liu, X (2019) Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome. GigaScience (TSI), 8 (10). pp. 1-16. ISSN 2047-217X
Lu, Q and Hong, Y and Li, S and Liu, H and Li, H and Zhang, J and Lan, H and Liu, H and Li, X and Wen, S and Zhou, G and Varshney, R K and Jiang, H and Chen, X and Liang, X (2019) Genome-wide identification of microsatellite markers from cultivated peanut (Arachis hypogaea L.). BMC Genomics (TSI), 20 (1). pp. 1-9. ISSN 1471-2164
Pandey, M K and Pandey, A K and Kumar, R and Nwosu, C V and Guo, B and Wright, G C and Bhat, R S and Chen, X and Bera, S K and Yuan, M and Jiang, H and Faye, I and Radhakrishnan, T and Wang, X and Liang, X and Liao, B and Zhang, X and Varshney, R K and Zhuang, W (2020) Translational genomics for achieving higher genetic gains in groundnut. Theoretical and Applied Genetics (TSI), 133 (5). pp. 1679-1702. ISSN 0040-5752
Liu, H and Liang, X and Lu, Q and Li, H and Liu, H and Li, S and Varshney, R K and Hong, Y and Chen, X (2020) Global transcriptome analysis of subterranean pod and seed in peanut (Arachis hypogaea L.) unravels the complexity of fruit development under dark condition. Scientific Reports (TSI), 10 (1). pp. 1-12. ISSN 2045-2322
Thudi, M and Palakurthi, R and Schnable, J C and Chitikineni, A and Dreisigacker, S and Mace, E and Srivastava, R K and Satyavathi, C T and Odeny, D and Tiwari, V K and Lam, H M and Hong, Y B and Singh, V K and Li, G and Xu, Y and Chen, X and Kaila, S and Nguyen, H and Sivasankar, S and Jackson, Scott A. and Close, T J and Shubo, W and Varshney, R K (2021) Genomic resources in plant breeding for sustainable agriculture. Journal of Plant Physiology (TSI), 257. pp. 1-18. ISSN 0176-1617
Gangurde, S S and Nayak, S N and Joshi, P and Purohit, S and Sudini, H K and Chitikineni, A and Hong, Y and Guo, B and Chen, X and Pandey, M K and Varshney, R K (2021) Comparative Transcriptome Analysis Identified Candidate Genes for Late Leaf Spot Resistance and Cause of Defoliation in Groundnut. International Journal of Molecular Sciences (TSI), 22 (4491). pp. 1-23. ISSN 1422-0067
Hong, Y and Pandey, M K and Lu, Q and Liu, H and Gangurde, S S and Li, S and Liu, H and Li, H and Liang, X and Varshney, R K and Chen, X (2021) Genetic diversity and distinctness based on morphological and SSR markers in peanut. Agronomy Journal (TSI), 113 (6). pp. 4648-4660. ISSN 0002-1962
Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224
Xiao, Y and Liu, H and Lu, Q and Li, H and Liu, Q and Li, S and Liu, H and Varshney, R K and Liang, X and Hong, Y and Chen, X (2022) Lipid profile variations in high olecic acid peanuts by following different cooking processes. Food Research International, 155. ISSN 0963-9969
Lu, Q and Liu, H and Hong, Y and Liang, X and Li, S and Liu, H and Li, H and Wang, R and Deng, Q and Jiang, H and Varshney, R K and Pandey, M K and Chen, X (2022) Genome-Wide Identification and Expression of FAR1 Gene Family Provide Insight Into Pod Development in Peanut (Arachis hypogaea). Frontiers in Plant Science (TSI), 13. 01-11. ISSN 1664-462X
Xiao, Y and Liu, H and Du, P and Liang, X and Li, H and Lu, Q and Li, S and Liu, H and Hong, Y and Varshney, R K and Chen, X (2022) Impact of different cooking methods on the chemical profile of high-oleic acid peanut seeds. Food Chemistry, 379. ISSN 0308-8146
Lokya, V and Parmar, S and Pandey, A K and Sudini, H K and Huai, D and Ozias-Akins, P and Foyer, C H and Nwosu, C V and Karpinska, B and Baker, A and Xu, P and Liao, B and Mir, R R and Chen, X and Guo, B and Nguyen, H T and Kumar, R and Bera, S K and Singam, P and Kumar, A and Varshney, R K and Pandey, M K (2023) Prospects for developing allergen-depleted food crops. The Plant Genome (TSI), 16 (4). pp. 1-32. ISSN 1940-3372
He, Z and Zhang, Z and Valè, G and Segundo, B S and Chen, X and Pasupuleti, J (2023) Editorial: Disease and pest resistance in rice. Frontiers in Plant Science (TSI), 14. 01-03. ISSN 1664-462X
Garg, V and Barmukh, R and Chitikineni, A and Roorkiwal, M and Ojiewo, C and Bohra, A and Thudi, M and Singh, V K and Kudapa, H and Saxena, R K and Fountain, J and Mir, R R and Bharadwaj, C and Chen, X and Xin, L and Pandey, M K (2024) Celebrating Professor Rajeev K. Varshney's transformative research odyssey from genomics to the field on his induction as Fellow of the Royal Society. Plant Biotechnology Journal. pp. 1-12. ISSN 1467-7652
Lu, Q and Huang, L and Liu, H and Garg, V and Gangurde, S S and Li, H and Chitikineni, A and Guo, D and Pandey, M K and Li, S and Liu, H and Wang, R and Deng, Q and Du, P and Varshney, R K and Liang, X and Hong, Y and Chen, X (2024) A genomic variation map provides insights into peanut diversity in China and associations with 28 agronomic traits. Nature Genetics. pp. 1-16. ISSN 1546-1718
Deng, Q and Du, P and Gangurde, S S and Hong, Y and Xiao, Y and Hu, D and Li, H and Lu, Q and Li, S and Liu, H and Wang, R and Huang, L and Wang, W and Garg, V and Liang, X and Varshney, R K and Chen, X and Liu, H (2024) ScRNA-seq reveals dark- and light-induced differentially expressed gene atlases of seedling leaves in Arachis hypogaea L. Plant Biotechnology Journal (TSI), 22 (7). pp. 1848-1866. ISSN 1467-7644