 | Up a level |
Huai, D and Xue, X and Wu, J and Pandey, M K and Liu, N and Huang, L and Yan, L and Chen, Y and Wang, X and Wang, Q and Kang, Y and Wang, Z and Jiang, H and Varshney, R K and Liao, B and Lei, Y (2024) Enhancing peanut nutritional quality by editing AhKCS genes lacking natural variation. Plant Biotechnology Journal. pp. 1-3. ISSN 1467-7644
Li, G and Guo, X and Sun, Y and Gangurde, S S and Zhang, K and Weng, F and Wang, G and Zhang, H and Li, A and Wang, X and Zhao, C (2024) Physiological and biochemical mechanisms underlying the role of anthocyanin in acquired tolerance to salt stress in peanut (Arachis hypogaea L.). Frontiers in Plant Science, 15. 01-13. ISSN 1664-462X
Pan, J and Li, X and Fu, C and Bian, J and Wang, Z and Yu, C and Liu, X and Wang, G and Tian, R and Song, X and Li, C and Xia, H and Zhao, S and Hou, L and Gao, M and Zi, H and Bertioli, D and Leal-Bertioli, S and Pandey, M K and Wang, X and Zhao, C (2024) High-density bin-based genetic map reveals a 530-kb chromosome segment derived from wild peanut contributing to late leaf spot resistance. Theoretical and Applied Genetics, 137. ISSN 0040-5752
Yu, B and Liu, N and Huang, L and Luo, H and Zhou, X and Lei, Y and Yan, L and Wang, X and Chen, W and Kang, Y and Ding, Y and Jin, G and Pandey, M K and Janila, P and Sudini, H K and Varshney, R K and Jiang, H and Liu, S and Liao, B (2023) Identification and application of a candidate gene AhAftr1 for aflatoxin production resistance in peanut seed (Arachis hypogaea L.). Journal of Advanced Research. pp. 1-12. ISSN 2090-1232
Song, B and Ning, W and Wei, D and Jiang, M and Zhu, K and Wang, X and Edwards, D and Odeny, D A and Cheng, S (2023) Plant genome resequencing and population genomics: Current status and future prospects. Molecular Plant (TSI), 16. pp. 1252-1268. ISSN 1674-2052
Sun, M and Yan, H and Zhang, A and Jin, Y and Lin, C and Luo, L and Wu, B and Fan, Y and Tian, S and Cao, X and Wang, Z and Luo, J and Yang, Y and Jia, J and Zhou, P and Tang, Q and Jones, C S and Varshney, R K and Srivastava, R K and He, M and Xie, Z and Wang, X and Feng, G and Nie, G and Huang, D and Zhang, X and Zhu, F and Huang, L (2023) Milletdb: a multi-omics database to accelerate the research of functional genomics and molecular breeding of millets. Plant Biotechnology Journal, 21. pp. 2348-2357. ISSN 1467-7652
Yan, L and Song, W and Wang, Z and Yu, D and Sudini, H K and Kang, Y and Lei, Y and Huai, D and Chen, Y and Wang, X and Wang, Q and Liao, B (2023) Dissection of the Genetic Basis of Resistance to Stem Rot in Cultivated Peanuts (Arachis hypogaea L.) through Genome-Wide Association Study. Genes (TSI), 14. pp. 1-13. ISSN 2073-4425
Devos, K M and Qi, P and Bahri, B A and Gimode, D M and Jenike, K and Manthi, S J and Lule, D and Lux, T and Martinez-Bello, L and Pendergast IV, T H and Plott, C and Saha, D and Sidhu, G S and Sreedasyam, A and Wang, X and Wang, H and Wright, H and Zhao, J and Deshpande, S P and Villiers, S de and Dida, M M and Grimwood, J and Jenkins, J and Lovell, J and Mayer, K F X and Mneney, E E and Ojulong, H F and Schatz, M C and Schmutz, J and Song, B and Tesfaye, K and Odeny, D A (2023) Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet. Nature Communications (TSI), 14. pp. 1-15. ISSN 2041-1723
Yan, H and Sun, M and Zhang, Z and Jin, Y and Zhang, A and Lin, C and Wu, B and He, M and Xu, B and Wang, J and Qin, P and Mendieta, J P and Nie, G and Wang, J and Jones, C S and Feng, G and Srivastava, R K and Zhang, X and Bombarely, A and Luo, D and Jin, L and Peng, Y and Wang, X and Ji, Y and Tian, S and Huang, L (2023) Pangenomic analysis identifies structural variation associated with heat tolerance in pearl millet. Nature Genetics, 55. pp. 507-518. ISSN 1546-1718
Huai, D and Wu, J and Xue, X and Hu, M and Zhi, C and Pandey, M K and Liu, N and Huang, L and Bai, D and Yan, L and Chen, Y and Wang, X and Kang, Y and Wang, Z and Jiang, H and Lei, Y and Varshney, R K and Liao, B (2023) Red fluorescence protein (DsRed2) promotes the screening efficiency in peanut genetic transformation. Frontiers in Plant Science (TSI), 14. 01-11. ISSN 1664-462X
Gangurde, S S and Xavier, A and Naik, Y D and Jha, U C and Rangari, S K and Kumar, R and Reddy, M S S and Channale, S and Elango, D and Mir, R R and Zwart, R and Laxuman, C and Sudini, H K and Pandey, M K and Punnuri, S and Mendu, V and Reddy, U K and Guo, B and Gangarao, N V P R and Sharma, V K and Wang, X and Zhao, C and Thudi, M (2022) Two decades of association mapping: Insights on disease resistance in major crops. Frontiers in Plant Science (TSI), 13. 01-22. ISSN 1664-462X
Pan, J and Zhou, X and Ahmad, N and Zhang, K and Tang, R and Zhao, H and Jiang, J and Tian, M and Li, C and Li, A and Zhang, X and He, L and Ma, J and Li, X and Tian, R and Ma, C and Pandey, M K and Varshney, R K and Wang, X and Zhao, C (2022) BSA‑seq and genetic mapping identified candidate genes for branching habit in peanut. Theoretical and Applied Genetics, 135. pp. 4457-4468. ISSN 1432-2242
Yang, T and Liu, R and Luo, Y and Hu, S and Wang, D and Wang, C and Pandey, M K and Ge, S and Xu, Q and Li, N and Li, G and Huang, Y and Saxena, R K and Ji, Y and Li, M and Yan, X and He, Y and Liu, Y and Wang, X and Xiang, C and Varshney, R K and Ding, H and Gao, S and Zong, X (2022) Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics. Nature Genetics, 54. pp. 1553-1563. ISSN 1546-1718
Yan, L and Song, W and Yu, D and Sudini, H K and Kang, Y and Lei, Y and Huai, D and Wang, Z and Chen, Y and Wang, X and Liao, B (2022) Genetic, Phenotypic, and Pathogenic Variation Among Athelia rolfsii, the Causal Agent of Peanut Stem Rot in China. Plant Disease, 106 (10). ISSN 1943-7692
Ding, Y and Qiu, X and Luo, H and Huang, L and Guo, J and Yu, B and Sudini, H K and Pandey, M K and Kang, Y and Liu, N and Zhou, X and Chen, W and Chen, Y and Wang, X and Huai, D and Yan, L and Lei, Y and Jiang, H and Varshney, R K and Liu, K and Liao, B (2022) Comprehensive evaluation of Chinese peanut mini‑mini core collection and QTL mapping for aflatoxin resistance. BMC Plant Biology (TSI), 22. 01-15. ISSN 1471-2229
Garg, V and Dudchenko, O and Wang, J and Khan, A W and Gupta, S and Kaur, P and Han, K and Saxena, R K and Kale, S M and Pham, M and Yu, J and Chitikineni, A and Zhang, Z and Fan, G and Lui, C and Valluri, V K and Meng, F and Bhandari, A and Liu, X and Yang, T and Chen, H and Valliyodan, B and Roorkiwal, M and Shi, C and Yang, H B and Durand, N C and Pandey, M K and Li, G and Barmukh, R and Wang, X and Chen, X and Lam, H M and Jiang, H and Zong, X and Liang, X and Liu, X and Liao, B and Guo, B and Jackson, S and Nguyen, H T and Zhuang, W and Shubo, W and Wang, X and Aiden, E L and Bennetzen, J L and Varshney, R K (2021) Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research, 42. pp. 315-329. ISSN 2090-1224
Yan, L and Wang, Z and Song, W and Fan, P and Kang, Y and Lei, Y and Wan, L and Huai, D and Chen, Y and Wang, X and Sudini, H and Liao, B (2021) Genome sequencing and comparative genomic analysis of highly and weakly aggressive strains of Sclerotium rolfsii, the causal agent of peanut stem rot. BMC Genomics (TSI), 22 (1). pp. 1-15. ISSN 1471-2164
Wang, X and Chen, S and Ma, X and Yssel, A E J and Chaluvadi, S R and Johnson, M S and Gangashetty, P and Hamidou, F and Sanogo, M D and Zwaenepoel, A and Wallace, J and de Peer, Y and Bennetzen, J L and Van Deynze, A (2021) Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis). GigaScience (TSI), 10 (3). pp. 1-11. ISSN 2047-217X
Song, X and Sun, P and Yuan, J and Gong, K and Li, N and Meng, F and Zhang, Z and Li, X and Hu, J and Wang, J and Yang, Q and Jiao, B and Nie, F and Liu, T and Chen, W and Feng, S and Pei, Q and Yu, T and Kang, X and Zhao, W and Cui, C and Yu, Y and Wu, T and Shan, L and Liu, M and Qin, Z and Lin, H and Varshney, R K and Li, X Q and Paterson, A H and Wang, X (2020) The celery genome sequence reveals sequential paleo‐polyploidizations, karyotype evolution and resistance gene reduction in apiales. Plant Biotechnology Journal (TSI). pp. 1-14. ISSN 1467-7644
Wang, X and Xu, P and Ren, Y and Yin, L and Li, S and Wang, Y and Shi, Y and Li, H and Cao, X and Chi, X and Yu, T and Pandey, M K and Varshney, R K and Yuan, M (2020) Genome-wide identification of meiotic recombination hot spots detected by SLAF in peanut (Arachis hypogaea L.). Scientific Reports (TSI), 10 (1). ISSN 2045-2322
Pandey, M K and Pandey, A K and Kumar, R and Nwosu, C V and Guo, B and Wright, G C and Bhat, R S and Chen, X and Bera, S K and Yuan, M and Jiang, H and Faye, I and Radhakrishnan, T and Wang, X and Liang, X and Liao, B and Zhang, X and Varshney, R K and Zhuang, W (2020) Translational genomics for achieving higher genetic gains in groundnut. Theoretical and Applied Genetics (TSI), 133 (5). pp. 1679-1702. ISSN 0040-5752
Agarwal, G and Clevenger, J and Kale, S M and Wang, H and Pandey, M K and Choudhary, D and Yuan, M and Wang, X and Culbreath, A K and Holbrook, C C and Liu, X and Varshney, R K and Guo, B (2020) A recombination bin-map identified a major QTL for resistance to Tomato Spotted Wilt Virus in peanut (Arachis hypogaea). Scientific Reports (TSI), 9 (1). pp. 1-13. ISSN 2045-2322
Li, S and Zhu, Y and Varshney, R K and Zhan, J and Zheng, X and Shi, J and Wang, X and Liu, G and Wang, H (2020) A systematic dissection of the mechanisms underlying the natural variation of silique number in rapeseed ( Brassica napus L.) germplasm. Plant Biotechnology Journal (TSI), 18 (2). pp. 568-580. ISSN 1467-7644
Chen, X and Lu, Q and Liu, H and Zhang, J and Hong, Y and Lan, H and Li, H and Wang, J and Liu, H and Li, S and Pandey, M K and Zhang, Z and Zhou, G and Yu, J and Zhang, G and Yuan, J and Li, X and Wen, S and Meng, F and Yu, S and Wang, X and Siddique, K H M and Liu, Z J and Paterson, A H and Varshney, R K and Liang, X (2019) Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement. Molecular Plant (TSI), 12 (7). pp. 920-934. ISSN 16742052
Pandey, M K and Kumar, R and Pandey, A K and Soni, P and Gangurde, S S and Sudini, H K and Fountain, J G and Liao, B and Desmae, H and Okori, P and Chen, X and Jiang, H and Mendu, V and Falalou, H and Njoroge, S and Mwololo, J K and Guo, B and Zhuang, W and Wang, X and Liang, X and Varshney, R K (2019) Mitigating Aflatoxin Contamination in Groundnut through A Combination of Genetic Resistance and Post-Harvest Management Practices. Toxins (TSI), 11(6) (315). pp. 1-21. ISSN 2072-6651
Zhuang, W and Chen, H and Yang, M and Wang, J and Pandey, M K and Zhang, C and Chang, W C and Zhang, L and Zhang, X and Tang, R and Garg, V and Wang, X and Tang, H and Chow, G N and Wang, J and Deng, Y and Wang, D and Khan, A W and Yang, Q and Cai, T and Bajaj, P and Wu, K and Guo, B and Zhang, X and Li, J and Liang, F and Hu, J and Liao, B and Liu, S and Chitikineni, A and Yan, H and Zheng, Y and Shan, S and Liu, Q and Xie, D and Wang, Z and Khan, S A and Ali, N and Zhao, C and Li, X and Luo, Z and Zhang, S and Zhuang, R and Peng, Z and Wang, S and Mamadou, G and Zhuang, Y and Zhao, Z and Yu, W and Xiong, F and Quan, W and Yuan, M and Li, Y and Zou, H and Xia, H and Zha, Li and Fan, J and Yu, J and Xie, W and Yuan, J and Chen, K and Zhao, S and Chu, W and Chen, Y and Sun, P and Meng, F and Zhuo, T and Zhao, Y and Li, C and He, G and Zhao, Y and Wang, C and Kavi Kishor, P B and Pan, R L and Paterson, A H and Wang, X and Ming, R and Varshney, R K (2019) The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics (TSI), 51 (5). pp. 865-876. ISSN 1061-4036
Wang, X and Xu, P and Yin, L and Ren, Y and Li, S and Shi, Y and Alcock, T D and Xiong, Q and Qian, W and Chi, X and Pandey, M K and Varshney, R K and Yuan, M (2018) Genomic and Transcriptomic Analysis Identified Gene Clusters and Candidate Genes for Oil Content in Peanut (Arachis hypogaea L.). Plant Molecular Biology Reporter (TSI). pp. 1-12. ISSN 0735-9640
Agarwal, G and Clevenger, J and Pandey, M K and Wang, H and Shasidhar, Y and Chu, Y and Fountain, J C and Choudhary, D and Culbreath, A K and Liu, X and Huang, G and Wang, X and Deshmukh, R and Holbrook, C C and Bertioli, D J and Ozias-Akins, P and Jackson, S A and Varshney, R K and Guo, B (2018) High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut. Plant Biotechnology Journal (TSI), 16 (11). pp. 1954-1967. ISSN 14677644
Varshney, R K and Shi, C and Thudi, M and Mariac, C and Wallace, J and Qi, P and Zhang, H and Zhao, Y and Wang, X and Rathore, A and Srivastava, R K and Chitikineni, A and Fan, G and Bajaj, P and Punnuri, S and Gupta, S K and Wang, H and Jiang, Y and Couderc, M and Katta, M A V S K and Paudel, D R and Mungra, K D and Chen, W and Harris-Shultz, K R and Garg, V and Desai, N and Doddamani, D and Kane, N A and Conner, J A and Ghatak, A and Chaturvedi, P and Subramaniam, S and Yadav, O P and Berthouly-Salazar, C and Hamidou, F and Wang, J and Liang, X and Clotault, J and Upadhyaya, H D and Cubry, P and Rhoné, B and Gueye, M C and Sunkar, R and Dupuy, C and Sparvoli, F and Cheng, S and Mahala, R S and Singh, B and Yadav, R S and Lyons, E and Datta, S K and Hash, C T and Devos, K M and Buckler, E and Bennetzen, J L and Paterson, A H and Ozias-Akins, P and Grando, S and Wang, J and Mohapatra, T and Weckwerth, W and Reif, J C and Liu, X and Vigouroux, Y and Xu, X (2017) Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology. pp. 1-13. ISSN 1087-0156
Zhao, C and Qiu, J and Agarwal, G and Wang, J and Ren, X and Xia, H and Guo, B and Ma, C and Wan, S and Bertioli, D J and Varshney, R K and Pandey, M K and Wang, X (2017) Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea). Frontiers in Plant Science, 8 (1209). pp. 1-12. ISSN 1664-462X
Pandey, M K and Wang, H and Khera, P and Vishwakarma, M K and Kale, S M and Culbreath, A K and Holbrook, C C and Wang, X and Varshney, R K and Guo, B (2017) Genetic Dissection of Novel QTLs for Resistance to Leaf Spots and Tomato Spotted Wilt Virus in Peanut (Arachis hypogaea L.). Frontiers in Plant Science, 8 (25). pp. 1-12. ISSN 1664-462X
Chen, X and Li, H and Pandey, M K and Yang, Q and Wang, X and Garg, V and Li, H and Chi, X and Doddamani, D and Hong, Y and Upadhyaya, H D and Guo, H and Khan, A W and Zhu, F and Zhang, X and Pan, L and Pierce, G J and Zhou, G and Krishnamohan, K A V S and Chen, M and Zhong, N and Agarwal, G and Li, S and Chitikineni, A and Zhang, G Q and Sharma, S and Chen, N and Liu, H and Janila, P and Li, S and Wang, M and Wang, T and Sun, J and Li, X and Li, C and Wang, M and Yu, L and Wen, S and Singh, S and Yang, Z and Zhao, J and Zhang, C and Yu, Y and Bi, J and Zhang, X and Liu, Z J and Paterson, A H and Wang, S and Liang, X and Varshney, R K and Yu, S (2016) Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens. Proceedings of the National Academy of Sciences, 113 (24). pp. 6785-6790. ISSN 0027-8424
Bertioli, D J and Cannon, S B and Froenicke, L and Huang, G and Farmer, A D and Cannon, E K S and Liu, X and Gao, D and Clevenger, J and Dash, S and Ren, L and Moretzsohn, M C and Shirasawa, K and Huang, W and Vidigal, B and Abernathy, B and Chu, Y and Niederhuth, C E and Umale, P and Araújo, A C G and Kozik, A and Kim, K D and Burow, M D and Varshney, R K and Wang, X and Zhang, X and Barkley, N and Guimarães, P M and Isobe, S and Guo, B and Liao, B and Stalker, H T and Schmitz, R J and Scheffler, B E and Leal-Bertioli, S C M and Xun, X and Jackson, S A and Michelmore, R and Ozias-Akins, P (2016) The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nature Genetics, 48 (-). pp. 438-446. ISSN 1546-1718
Naik, Y D and Zhao, C and Channale, S and Nayak, S N and Bhutia, K L and Gautam, A and Kumar, R and Niranjan, V and Shah, T M and Mott, R and Punnuri, S and Pandey, M K and Wang, X and Varshney, R K and Thudi, M (2024) Bioinformatics for Plant Genetics and Breeding Research. In: Frontier Technologies for Crop Improvement. Sustainability Sciences in Asia and Africa . Springer, Singapore, pp. 35-64. ISBN 978-981-99-4673-0
Guo, B and Khera, P and Wang, H and Peng, Z and Sudini, H and Wang, X and Osiru, M and Chen, J and Vadez, V and Yuan, M and Wang, C T and Zhang, X and Waliyar, F and Wang, J and Varshney, R K (2016) Annotation of Trait Loci on Integrated Genetic Maps of Arachis Species. In: Peanuts: Genetics, Processing, and Utilization. Academic Press and AOCS Press, pp. 163-207. ISBN 978-1630670382