Kambara, K and Gupta, S K and Takano, T and Tsugama, D (2024) Data from collection and analysis of RNA sequencing data from pearl millet. Data in Brief, 55. pp. 1-5. ISSN 2352-3409
Full text not available from this repository. (Request a copy)Abstract
Pearl millet (Pennisetum glaucum, also known as Cenchrus americanus) is a cereal crop that has a C4 photosynthesis system and that can grow and develop seeds even under stressed conditions including drought-stressed, high temperature-stressed and nutrient-poor conditions. In previous studies, transcriptomes of pearl millet were studied by RNA sequencing (RNA-Seq) to understand mechanisms regulating its development and tolerance to such stressed conditions. Here, RNA-Seq reads from 565 pearl millet samples from 25 projects in the NCBI (National Center for Biotechnology Information) BioProject database were collected and mapped to the pearl millet reference genome to obtain read counts and transcripts per million (TPM) for each pearl millet gene. The count and TPM data for all the 565 samples as well as the attributes of those samples and projects were deposited in the figshare repository (https://doi.org/10.6084/m9.figshare.24902100).
| Item Type: | Article |
|---|---|
| Divisions: | Global Research Program - Accelerated Crop Improvement |
| CRP: | UNSPECIFIED |
| Uncontrolled Keywords: | Pearl millet, RNA sequencing, Transcriptome, Abiotic stress, gene |
| Subjects: | Others > Abiotic Stress Mandate crops > Millets > Pearl Millet Others > Genetics and Genomics |
| Depositing User: | Mr Nagaraju T |
| Date Deposited: | 16 Jan 2025 06:22 |
| Last Modified: | 16 Jan 2025 06:22 |
| URI: | http://oar.icrisat.org/id/eprint/12912 |
| Official URL: | https://www.sciencedirect.com/science/article/pii/... |
| Projects: | UNSPECIFIED |
| Funders: | UNSPECIFIED |
| Acknowledgement: | UNSPECIFIED |
| Links: |
Actions (login required)
 |
View Item |
Altmetric
Altmetric