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Hamilton, R S and Sie, M and Valkoun, J and Upadhyaya, H D and Mahalakshmi, V (2005) The need for allele mining: perspectives of the System-wide Genetic Resources Programme (SGRP). In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Upadhyaya, H D and Baum, M and Buhariwala, H K and Udupa, S M and Furman, B J and Dwivedi, S L and Hoisington, D A and Gaur, P M and Chandra, S and Gowda, C L L and Valkoun, J (2006) Mining the chickpea composite collection for allelic variation. In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Chabane, K and Varshney, R K and Graner, A and Valkoun, J (2008) Generation and exploitation of EST-derived SSR markers for assaying molecular diversity in durum wheat populations. Genetic Resources and Crop Evolution, 55 (6). pp. 869-881. ISSN 1573-5109
Varshney, R K and Thiel, T and Sretenovic-Rajicic, T and Baum, M and Valkoun, J and Guo, P and Grando, S and Ceccarelli, S and Graner, A (2008) Identification and validation of a core set of informative genic SSR and SNP markers for assaying functional diversity in barley. Molecular Breeding, 22 (1). pp. 1-13. ISSN 1380-3743
Guo, P and Baum, M and Grando, S and Ceccarelli, S and Bai, G and Li, R and Korff, M V and Varshney, R K and Graner, A and Valkoun, J (2009) Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. Journal of Experimental Botany, 60 (12). pp. 3531-3544.