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Valliyodan, B and Brown, A V and Wang, J and Patil, G and Liu, Y and Otyama, P I and Nelson, R T and Vuong, T and Song, Q and Musket, T A and Wagner, R and Marri, P and Reddy, S and Sessions, A and Wu, X and Grant, D and Bayer, P E and Roorkiwal, M and Varshney, R K and Liu, X and Edwards, D and Xu, D and Joshi, T and Cannon, S B and Nguyen, H T (2021) Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing. Scientific Data (TSI), 8 (1). pp. 1-9. ISSN 2052-4463
Valliyodan, B and Cannon, S B and Bayer, P E and Shu, S and Brown, A V and Ren, L and Jenkins, J and Chung, C Y L and Chan, T F and Daum, C G and Plott, C and Hastie, A and Baruch, K and Barry, K W and Huang, W and Patil, G and Varshney, R K and Hu, H and Batley, J and Yuan, Y and Song, Q and Stupar, R M and Goodstein, D M and Stacey, G and Lam, H M and Jackson, S A and Schmutz, J and Grimwood, J and Edwards, D and Nguyen, H T (2019) Construction and comparison of three reference‐quality genome assemblies for soybean. The Plant Journal (TSI), 100 (5). pp. 1066-1082. ISSN 0960-7412
Bertioli, D J and Jenkins, J and Clevenger, J and Dudchenko, O and Gao, D and Seijo, G and Leal-Bertioli, S C M and Ren, L and Farmer, A D and Pandey, M K and Samoluk, S S and Abernathy, B and Agarwal, G and Ballén-Taborda, C and Cameron, C and Campbell, J and Chavarro, C and Chitikineni, A and Chu, Y and Dash, S and El Baidouri, M and Guo, B and Huang, W and Kim, K D and Korani, W and Lanciano, S and Lui, C G and Mirouze, M and Moretzsohn, M C and Pham, M and Shin, J H and Shirasawa, K and Sinharoy, S and Sreedasyam, A and Weeks, N and Zhang, X and Zheng, Z and Sun, Z and Froenicke, L and Aiden, E L and Michelmore, R and Varshney, R K and Holbrook, C C and Cannon, E K S and Scheffler, B E and Grimwood, J and Ozias-Akins, P and Cannon, S B and Jackson, S A and Schmutz, J (2019) The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature Genetics (TSI), 51 (5). pp. 877-884. ISSN 1061-4036
Bertioli, D J and Cannon, S B and Froenicke, L and Huang, G and Farmer, A D and Cannon, E K S and Liu, X and Gao, D and Clevenger, J and Dash, S and Ren, L and Moretzsohn, M C and Shirasawa, K and Huang, W and Vidigal, B and Abernathy, B and Chu, Y and Niederhuth, C E and Umale, P and Araújo, A C G and Kozik, A and Kim, K D and Burow, M D and Varshney, R K and Wang, X and Zhang, X and Barkley, N and Guimarães, P M and Isobe, S and Guo, B and Liao, B and Stalker, H T and Schmitz, R J and Scheffler, B E and Leal-Bertioli, S C M and Xun, X and Jackson, S A and Michelmore, R and Ozias-Akins, P (2016) The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nature Genetics, 48 (-). pp. 438-446. ISSN 1546-1718
Kudapa, H and Azam, S and Sharpe, A G and Taran, B and Li, R and Deonovic, B and Cameron, C and Farmer, A D and Cannon, S B and Varshney, R K (2014) Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications. PLoS ONE, 9 (1). pp. 1-12. ISSN 1932-6203
Kudapa, H and Bharti, A K and Cannon, S B and Farmer, A D and Mulaosmanovic, B and Kramer, R and Bohra, A and Weeks, N T and Crow, J A and Tuteja, R and Shah, T and Dutta, S and Gupta, D K and Singh, Archana and Gaikwad, K and Sharma, T R and May, G D and Singh, N K and Varshney, R K (2012) A Comprehensive Transcriptome Assembly of Pigeonpea (Cajanus cajan L.) using Sanger and Second-Generation Sequencing Platforms. Molecular Plant, 5 (5). pp. 1020-1028. ISSN 1752-9867
Dubey, A and Farmer, A and Schlueter, J and Cannon, S B and Abernathy, B and Tuteja, R and Woodward, J and Shah, T and Mulasmanovic, B and Kudapa, H and Raju, N L and Gothalwal, R and Pande, S and Xiao, Y and Town, C D and Singh, N K and May, G D and Jackson, S and Varshney, R K (2011) Defining the transcriptome assembly and its use for genome dynamics and transcriptome profiling studies in pigeonpea (Cajanus cajan L.). DNA Research, 18 (3). pp. 153-164. ISSN 1340-2838, 1756-1663
Hiremath, P J and Farmer, A and Cannon, S B and Woodward, J and Kudapa, H and Tuteja, R and Kumar, A and Bhanuprakash, A and Mulaosmanovic, B and Gujaria, N and Krishnamurthy, L and Gaur, P M and Kavi Kishor, P B and Shah, T and Srinivasan, R and Lohse, M and Xiao, Y and Town, C D and Cook, D R and May, G D and Varshney, R K (2011) Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnology Journal, 9. pp. 922-931.