Near real-time agriculture monitoring at national scale at parcel resolution: Performance assessment of the Sen2-Agri automated system in various cropping systems around the world

Defourny, P and Bontemps, S and Bellemans, N and Cara, C and Dedieu, G and Guzzonato, E and Hagolle, O and Inglada, J and Nicola, L and Rabaute, T and Savinaud, M and Udroiu, C and Valero, S and Bégué, A and Dejoux, J F and El Harti, A and Ezzahar, J and Kussul, N and Labbassi, K and Lebourgeois, V and Miao, Z and Newby, T and Nyamugama, A and Salh, N and Shelestov, A and Simonneaux, V and Traore, P S and Traore, S S and Koetz, B (2019) Near real-time agriculture monitoring at national scale at parcel resolution: Performance assessment of the Sen2-Agri automated system in various cropping systems around the world. Remote Sensing of Environment (TSI), 221. pp. 551-568. ISSN 00344257

PDF (It is an Open Access article) - Published Version
Download (4MB) | Preview


The convergence of new EO data flows, new methodological developments and cloud computing infrastructure calls for a paradigm shift in operational agriculture monitoring. The Copernicus Sentinel-2 mission providing a systematic 5-day revisit cycle and free data access opens a completely new avenue for near real-time crop specific monitoring at parcel level over large countries. This research investigated the feasibility to propose methods and to develop an open source system able to generate, at national scale, cloud-free composites, dynamic cropland masks, crop type maps and vegetation status indicators suitable for most cropping systems. The so-called Sen2-Agri system automatically ingests and processes Sentinel-2 and Landsat 8 time series in a seamless way to derive these four products, thanks to streamlined processes based on machine learning algorithms and quality controlled in situ data. It embeds a set of key principles proposed to address the new challenges arising from countrywide 10 m resolution agriculture monitoring. The full-scale demonstration of this system for three entire countries (Ukraine, Mali, South Africa) and five local sites distributed across the world was a major challenge met successfully despite the availability of only one Sentinel-2 satellite in orbit. In situ data were collected for calibration and validation in a timely manner allowing the production of the four Sen2-Agri products over all the demonstration sites. The independent validation of the monthly cropland masks provided for most sites overall accuracy values higher than 90%, and already higher than 80% as early as the mid-season. The crop type maps depicting the 5 main crops for the considered study sites were also successfully validated: overall accuracy values higher than 80% and F1 Scores of the different crop type classes were most often higher than 0.65. These respective results pave the way for countrywide crop specific monitoring system at parcel level bridging the gap between parcel visits and national scale assessment. These full-scale demonstration results clearly highlight the operational agriculture monitoring capacity of the Sen2-Agri system to exploit in near real-time the observation acquired by the Sentinel-2 mission over very large areas. Scaling this open source system on cloud computing infrastructure becomes instrumental to support market transparency while building national monitoring capacity as requested by the AMIS and GEOGLAM G-20 initiatives.

Item Type: Article
Divisions: Research Program : West & Central Africa
Uncontrolled Keywords: Agriculture monitoring, Cloud computing, Machine learning, Sentinel-2, Crop type mapping, Cropland, Crop mapping, Mali, Ukraine, South Africa, Crop monitoring
Subjects: Others > Cropping and Farming Systems
Others > Mali
Depositing User: Mr Ramesh K
Date Deposited: 14 Feb 2019 08:19
Last Modified: 17 Jan 2020 03:05
Official URL:
Funders: European Space Agency
Acknowledgement: This research was supported by the European Space Agency “Data User Element” program through the Sen2-Agri project (under contrat n°ESRIN 400109979/14/I-AM) carried out by a consortium led by UCL and including CESBIO, CS-France and CS-Romania. The authors are very thankful for the Sen2-Agri Champions Users and to all the members of the national and JECAM teams who collected and quality controlled in situ data and provided feedbacks to the Sen2-Agri products through the different national workshops locally organized.
View Statistics

Actions (login required)

View Item View Item