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Aggarwal, R K and Hendre, P S and Varshney, R K and Bhat, P R and Krishnakumar, V and Singh, L (2007) Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species. TAG Theoretical and Applied Genetics, 114 (2). pp. 359-372. ISSN 1432-2242
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Varshney, R K and Beier, U and Khlestkina, K E and Kota, R and Korzun, V and Graner, A and Borner, A (2007) Single nucleotide polymorphisms in rye (Secale cereale L.): discovery, frequency, and applications for genome mapping and diversity studies. TAG Theoretical and Applied Genetics, 114. pp. 1105-1116. ISSN 1432-2242
Varshney, R K and Chabane, K and Hendre, P S and Aggarwal, R K and Graner, A (2007) Comparative assessment of EST-SSR, EST-SNP and AFLP markers for evaluation of genetic diversity and conservation of genetic resources using wild, cultivated and elite barleys. Plant Science, 173 (6). pp. 638-649. ISSN 0168-9452
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Varshney, R K and Hoisington, D A and Nayak, S N and Graner, A (2009) Molecular Plant Breeding: Methodology and Achievements. In: Plant Genomics: Methods and Protocols. Methods in Molecular Biology (V 513). Humana Press, a part of Springer Science + Business Media, LLC, New York, pp. 283-304. ISBN 978-1-58829-997-0 (Print) ; 978-1-59745-427-8 (Online)
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Varshney, R K and Korzun, V and Borner, A (2005) Molecular Maps in Cereals: Methodology and Progress. In: Cereal Genomics. Springer Netherlands, pp. 35-82. ISBN 978-1-4020-2359-0
Varshney, R K and Kudapa, H and Roorkiwal, M and Thudi, M and Pandey, M K and Saxena, R K and Chamarthi, S K and Murali Mohan, S and Mallikarjuna, N and Upadhyaya, H D and Gaur, P M and Krishnamurthy, L and Saxena, K B and Nigam, S N and Pande, S (2012) Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies. Journal of Biosciences, 37 (5). pp. 811-820. ISSN 0973-7138
Varshney, R K and Langridge, P and Graner, A (2007) Application of Genomics to Molecular Breeding of Wheat and Barley. In: Advances in Genetics. Elsevier, Amsterdam, UK, pp. 121-155. ISBN 978-0-12-374621-4
Varshney, R K and Mahendar, T and Aggarwal, R K and Borner, A (2007) Genic molecular markers in plants: Development and applications. In: Genomics-Assisted Crop Improvement. Springer Netherlands, Dordrecht, The Netherlands, pp. 13-29. ISBN 978-1-4020-6294-0
Varshney, R K and Mahendar, T and Aruna, R and Nigam, S N and Neelima, K and Vadez, V and Hoisington, D A (2008) Extraordinary high allelic diversity in a groundnut (Arachis hypogaea L.) germplasm collection assayed by robust and informative SSR markers. In: Third International Conference of the Peanut Research Community On Advances in Arachis through Genomics and Biotechnology (AAGB – 2008), 4-8 November 2008, ICRISAT, Hyderabad, Andhra Pradesh, India.
Varshney, R K and Marcel, T C and Ramsay, L and Russell, J and Roder, M S and Stein, N and Waugh, R and Langridge, P and Niks, R E and Graner, A (2007) A high density barley microsatellite consensus map with 775 SSR loci. TAG Theoretical and Applied Genetics, 114 (6). pp. 1091-1103. ISSN 1432-2242
Varshney, R K and May, G D (2012) Next-generation sequencing technologies: opportunities and obligations in plant genomics. Briefings in Functional Genomics, 11 (1). pp. 1-2. ISSN 2041-2647
Varshney, R K and Paulo, M J and Grando, S and Eeuwijk, F A van and Keizer, L C P and Ceccarelli, S and Kilian, A and Baum, M and Graner, A (2012) Genome wide association analyses for drought tolerance related traits in barley (Hordeum vulgare L.). Field Crops Research, 126 (1). 171-180 . ISSN 0378-4290
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Varshney, R K and Thiel, T and Sretenovic-Rajicic, T and Baum, M and Valkoun, J and Guo, P and Grando, S and Ceccarelli, S and Graner, A (2008) Identification and validation of a core set of informative genic SSR and SNP markers for assaying functional diversity in barley. Molecular Breeding, 22 (1). pp. 1-13. ISSN 1380-3743
Varshney, R K and Thundi, M and May, G D and Jackson, S A (2010) Legume Genomics and Breeding. Plant Breeding Reviews, 33. pp. 257-304.
Varshney, R K and Tuberosa, R (2007) Genomics-assisted crop improvement: An overview. In: Genomics-Assisted Crop Improvement. Springer Verlag, Dordrecht, The Netherlands, pp. 1-12. ISBN 978-1-4020-6294-0
Varshney, R K and et al, . (2008) SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.) for QTL analysis and comparative mapping. In: Third International Conference of the Peanut Research Community On Advances in Arachis through Genomics and Biotechnology (AAGB – 2008), 4-8 November 2008, ICRISAT, Hyderabad, Andhra Pradesh, India.
Varshney, R K and et al, . (2011) Towards Integrating Genomics in Breeding in Groundnut (Arachis hypogaea L.). In: Plant & Animal Genome XIX Conference, 15-19 Jan 2011 , San Diego, USA.
Vazquez, M D and et al, . (2012) Genetic analysis of adult plant, quantitative resistance to stripe rust in wheat cultivar ‘Stephens’ in multi-environment trials. TAG Theoretical and Applied Genetics, 124 (1). pp. 1-11. ISSN 1432-2242
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Vetriventhan, M and Upadhyaya, H D and Anandakumar, C R and Senthilvel, S and Parzies, H K and Bharathi, A and Varshney, R K and Gowda, C L L (2012) Assessing genetic diversity, allelic richness and genetic relationship among races in ICRISAT foxtail millet core collection. Plant Genetic Resources (First View Article), 10 (3). pp. 214-223. ISSN 1479-2621
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