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Jiang, C and Edmeades, G O and Armstead, I and Lafitte, H R and Hayward, M D and Hoisington, D A (1990) Genetic analysis of adaptation differences between highland and lowland tropical maize using molecular markers. TAG Theoretical and Applied Genetics, 99 (7-8). pp. 1106-1119. ISSN 1432-2242
Xu, W W and Sleper, D A and Hoisington, D A (1991) A survey of restriction fragment length polymorphisms in tall fescue and its relatives. Genome, 34 (5). pp. 686-692. ISSN 1480-3321
Gardiner, J M and Coe, E H and Melia-Hancock, S and Hoisington, D A (1993) Development of a Core RFLP Map in Maize Using an Immortalized F2 Population. Genetics, 134. pp. 917-930. ISSN 1943-2631
Ragot, M and Hoisington, D A (1993) Molecular markers for plant breeding: comparisons of RFLP and RAPD genotyping costs. TAG Theoretical and Applied Genetics, 86 (8). pp. 975-984. ISSN 1432-2242
Ragot, M. and Sisco, P H and Hoisington, D A and Stuber, C W (1995) Molecular-Marker-Mediated Characterization of Favorable Exotic Alleles at Quantitative Trait Loci in Maize. Crop Science, 35. pp. 1306-1315. ISSN 1435-0653
Bohorova, N E and Ginkel, M van and Rajaram, V and Hoisington, D A (1995) Tissue culture response of CIMMYT elite bread wheat cultlvars and evaluation of regenerated plants. Cereal Research Communications, 23 (3). pp. 243-249. ISSN 1788-9170
Ribaut, J M and Jiang, C and Hoisington, D A and et al, . (1996) Identification of quantitative trait loci under drought conditions in tropical maize. 2. Yield components and marker-assisted selection strategies. TAG Theoretical and Applied Genetics, 94 (6-7). pp. 887-896. ISSN 1432-2242
Fennell, S and Bohorova, N and Hoisington, D A and et al, . (1996) Plant regeneration from immature embryos of 48 elite CIMMYT bread wheats. TAG Theoretical and Applied Genetics, 92 (2). pp. 163-169. ISSN 1432-2242
Bohn, M and Khairallah, M M and González-de-León, D and Hoisington, D A and et al, . (1996) QTL Mapping in Tropical Maize: I. Genomic Regions Affecting Leaf Feeding Resistance to Sugarcane Borer and Other Traits. Crop Science, 36. pp. 1352-1361. ISSN 1435-0653
Bohorova, N and Maciel, A M and Hoisington, D A (1996) Selection and characterization of Mexican strains of Bacillus thuringiensis active against four major lepidopteran maize pests. Entomophaga, 41 (2). pp. 153-165. ISSN 0013-8959
William, H M and Hoisington, D A and et al, . (1997) Detection of quantitative trait loci associated with leaf rust resistance in bread wheat. Genome, 40 (2). pp. 253-260. ISSN 1480-3321
Bergvinson, D and Willcox , M and Hoisington, D A (1997) Efficacy and Deployment of Transgenic Plants for Stemborer Management. International Journal of Tropical Insect Science formerly Insect Sci Appl, 17 (1). pp. 157-167. ISSN 1742-7584
Bohn, M M and Khairallah, M and Jiang, C and González-de-León, D and Hoisington, D A and et al, . (1997) QTL Mapping in Tropical Maize: II. Comparison of Genomic Regions for Resistance to Diatraea spp. Crop Science, 37 (6). pp. 1892-1902. ISSN 1435-0653
Bohorova, N and Cabrera, M and Abarca, C and Hoisington, D A and et al, . (1997) Susceptibility of Four Tropical Lepidopteran Maize Pests to Bacillus thuringiensis CryI-Type Insecticidal Toxins. Journal of Economic Entomology, 90 (2). pp. 412-415. ISSN 1938-291X
Ribaut, J M and Hu, X and Hoisington, D A (1997) Use of STSs and SSRs as rapid and reliable preselection tools in a marker-assisted selection-backcross scheme. Plant Molecular Biology Reporter, 15 (2). pp. 154-162. ISSN 1572-9818
Groh, S and Khairallah, M M and Hoisington, D A and et al, . (1998) Comparison of QTLs mapped in RILs and their test-cross progenies of tropical maize for insect resistance and agronomic traits. Plant Breeding, 117. pp. 193-202. ISSN 0179-9541
Ribaut, J M and Hoisington, D A (1998) Marker-assisted selection: new tools and strategies. Trends in Plant Science, 3 (6). pp. 236-239. ISSN 1360-1385
Groh, S and González-de-León, D and Khairallah, M M and Hoisington, D A and et al, . (1998) QTL Mapping in Tropical Maize: III. Genomic Regions for Resistance to Diatraea spp. and Associated Traits in Two RIL Populations. Crop Science, 38 (4). pp. 1062-1072. ISSN 1435-0653
Pernet, A and Hoisington, D A and et al, . (1999) Genetic mapping of maize streak virus resistance from the Mascarene source. I. Resistance in line D211 and stability against different virus clones. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 524-539. ISSN 1432-2242
Pernet, A and Hoisington, D A and et al, . (1999) Genetic mapping of maize streak virus resistance from the Mascarene source. II. Resistance in line CIRAD390 and stability across germplasm. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 540-553. ISSN 1432-2242
Crossa, J and Vargas, M and Eeuwijk, F A van and Jiang, C and Edmeades, G O and Hoisington, D A (1999) Interpreting genotype × environment interaction in tropical maize using linked molecular markers and environmental covariables. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 611-625. ISSN 1432-2242
Hoisington, D A and Khairallah, M and Reeves, T and Ribaut, J M and Skovmand, B and Taba, S and Warburton, M (1999) Plant genetic resources: What can they contribute toward increased crop productivity? Proceedings of the National Academy of Sciences, 96 (11). pp. 5937-5943. ISSN 1091-6490
Bohorova, N and Zhang, W and Julstrum, P and McLean, S and Luna, M and Brito, R M and Diaz, L and Ramos, M E and Estanol, P and Pacheco, M and Salgado, M and Hoisington, D A (1999) Production of transgenic tropical maize with cryIAb and cryIAc genes via microprojectile bombardment of immature embryos. TAG Theoretical and Applied Genetics, 99 (3-4). pp. 437-444. ISSN 1432-2242
Bohorova, N and Frutos, R and Royer, M and Estanol, P and Pacheco, M and Rascón, Q and McLean, S and Hoisington, D A (2001) Novel synthetic Bacillus thuringiensiscry1B gene and the cry1B-cry1Ab translational fusion confer resistance to southwestern corn borer, sugarcane borer and fall armyworm in transgenic tropical maize. TAG Theoretical and Applied Genetics, 103 (3-4). pp. 817-826. ISSN 1432-2242
Kanampiu, F and Ransom, J and Gressel, J and Jewell, D and Friesen, D and Grimanelli, D and Hoisington, D A (2002) Appropriateness of biotechnology to African agriculture: Striga and maize as paradigms. Plant Cell, Tissue and Organ Culture, 69 (2). pp. 105-110. ISSN 1573-5044
Ribaut , J M and Jiang, C and Hoisington, D A (2002) Simulation Experiments on Efficiencies of Gene Introgression by Backcrossing. Crop Science, 42 (2). pp. 557-565. ISSN 0011-183X
Hoisington, D A and Bohorova, N and Fennell, S and Khairallah, M and Pellegrineschi, A and Ribaut, J M (2002) The application of biotechnology to wheat improvement. In: Bread Wheat Improvement and Production. FAO Plant Production and Protection Series (30). Food and Agriculture Organization of the United Nations., pp. 175-198. ISBN 92-5-104809-6
Brito, R M and Velazquez, L and Noguera, L M and Pfeiffer, W and McLean, S and Hoisington, D A (2002) The effect of pretreatment with mild heat and drought stresses on the explant and biolistic transformation frequency of three durum wheat cultivars. Plant Cell Reports, 20 (10). pp. 955-960. ISSN 1432-203X
George, M L C and Prasanna, B M P and Rathore, R S and Setty, T A S and Kasim, F and Azrai, M and Vasal, S and Balla, O and Hautea, D and Canama, A and Regalado, E and Vargas, M and Khairallah, M and Jeffers, D and Hoisington, D A (2003) Identification of QTLs conferring resistance to downy mildews of maize in Asia. TAG Theoretical and Applied Genetics, 107 (3). pp. 544-551. ISSN 1432-2242
Prasanna, B M and Hoisington, D A (2003) Molecular Breeding for Maize Improvement: An Overview. Indian Journal of Biotechnology , 2 (1). pp. 85-98. ISSN 0972-5849
William, M and Singh, R P and Huerta-Espino, J and Islas, S O and Hoisington, D A (2003) Molecular Marker Mapping of Leaf Rust Resistance Gene Lr46 and Its Association with Stripe Rust Resistance Gene Yr29 in Wheat. Phytopathology , 93 (2). pp. 153-159. ISSN 0031-949X
George, M L C and Regalado, E and Li, W and Cao, M and Dahlan, M and Pabendon, M and Warburton, M L and Xianchun, X and Hoisington, D A (2003) Molecular characterization of Asian maize inbred lines by multiple laboratories. TAG Theoretical and Applied Genetics, 109 (1). pp. 80-91. ISSN 1432-2242
Reif, J C and Melchinger, A E and Xia, X C and Warburton, M L and Hoisington, D A and Vasal, S K and Beck, D and Bohn, M and Frisch, M (2003) Use of SSRs for establishing heterotic groups in subtropical maize. TAG Theoretical and Applied Genetics, 107 (5). pp. 947-957. ISSN 1432-2242
Sawkins, M C and Farmer, A D and Hoisington, D A and Sullivan, J and Tolopko, A and Jiang, Z and Ribaut, J M (2004) Comparative Map and Trait Viewer (CMTV): an integrated bioinformatic tool to construct consensus maps and compare QTL and functional genomics data across genomes and experiments. Plant Molecular Biology, 56 (3). pp. 465-480. ISSN 1573-5028
Pellegrineschi, A and Brito, R M and McLean, S and Hoisington, D A (2004) Effect of 2,4-Dichlorophenoxyacetic Acid and NaCl on the Establishment of Callus and Plant Regeneration in Durum and Bread Wheat. Plant Cell, Tissue and Organ Culture, 77 (3). pp. 245-250. ISSN 1573-5044
William, H M and Singh, R P and Trethowan, R and Ginkel, M van and Pellegrinshi, A and Huerta-Espino , J and Hoisington, D A (2005) Biotechnology Applications for Wheat Improvement at CIMMYT. Turkish Journal of Agriculture and Forestry , 29 (2). pp. 113-119. ISSN 1303-6173
Xia, X C and Reif, J C and Melchinger, A E and Frisch, M and Hoisington, D A and Beck, D and Pixley, K and Warburton, M L (2005) Genetic diversity among CIMMYT maize inbred lines investigated with SSR markers: II. subtropical, tropical midaltitude, and highland maize inbred lines and their relationships with elite U.S. and European maize. Crop Science, 45 (6). pp. 2573-2582.
Upadhyaya, H D and Pundir, R P S and Hash, C T and Hoisington, D A and Chandra, S and Gowda, C L L and Singh, Sube and Reddy, V G (2005) Genotyping Finger Millet Germplasm –Developing a Composite Collection. Documentation. International Crops Research Institute for Semi-Arid Tropics , Patancheru, Andhra Pradesh, India.
Reif, J C and Zhang, P and Dreisigacker, S and Warburton, M L and Ginkel, M van and Hoisington, D A and Bohn, M and Melchinger, A E (2005) Wheat genetic diversity trends during domestication and breeding. TAG Theoretical and Applied Genetics, 110 (5). pp. 859-864. ISSN 1432-2242
Suenaga, K. and Khairallah, M and William, H M and Hoisington, D A (2005) A new intervarietal linkage map and its application for quantitative trait locus analysis of "gigas" features in bread wheat. Genome, 48 (1). pp. 65-75. ISSN 1480-3321
Varshney, R K and Hoisington, D A and Tyagi, A K (2006) Advances in cereal genomics and applications in crop breeding. Trends in Biotechnology, 24 (11). pp. 490-499.
Jayashree, B and Ramu, P and Prasad, P and Bantte, K and Hash, C T and Chandra, S and Hoisington, D A and Varshney, R K (2006) A Database of Simple Sequence Repeats from Cereal and Legume Expressed Sequence Tags Mined in silico: Survey and Evaluation. In Silico Biology, 6 (6). pp. 607-620. ISSN 1434-3207
Upadhyaya, H D and Varshney, R K and Hash, C T and Hoisington, D A and Gowda, C L L and Reddy, V G and Chandra, S and Lalitha, N and Bharathi, A (2006) Development of composite collection and genotyping of foxtail millet [Setaria italic (L.) Beauv.] composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India.
Sharma, K K and Bhatnagar-Mathur, P and Sai-Vishnu-Priya, K and Anjaiah, V and Vadez, V and Waliyar, F and Kumar, P L and Nigam, S N and Hoisington, D A (2006) Genetic engineering of groundnut for crop improvement. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Vadez, V and Krishnamurthy, L and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K (2006) Genetic variability for salinity tolerance in chickpea. In: 3rd International Conference on Legume Genomics and Genetics, 9 - 13, April, 2006.
Hoisington, D A and Upadhyaya, H D and Dwivedi, S L and Baum, M and Udupa, S M and Furman, B J and Chandra, S and Eshwar, K and Gowda, C L L and Singh, S and Prasanth, V P (2006) Genotypic and Phenotypic Variation in the Global Collection of Chickpea (Cicer arietinum L.). Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Upadhyaya, H D and Varshney, R K and Hoisington, D A and et al, . (2006) Genotyping composite collection of finger millet [Eleusine coracana (L.) Gaertn]. In: Generation Challenge Program Annual Research Meeting, 12-16 September 2006, Sao Paulo, Brazil.
Reif, J C and Warburton, M L and Xia, X C and Hoisington, D A and Crossa, J and Taba, S and Muminovic, J and Bohn, M and Frisch, M and Melchinger, A E (2006) Grouping of accessions of Mexican races of maize revisited with SSR markers. TAG Theoretical and Applied Genetics, 113 (2). pp. 177-185. ISSN 1432-2242
Waliyar, F and Kumar, P L and Sharma, K K and Nigam, S N and Hoisington, D A (2006) Integrated multidisciplinary approach for containing Aflatoxin-linked malnutrition in humans and animals. In: Proceedings of Biotechnology approaches for alleviating malnutrition and human health, 9-11 Jan 2006, UAS Bangalore, Karnataka, India.
Jayashree, B and Reddy, P T and Leeladevi, Y and Crouch, J H and Mahalakshmi, V and Buhariwalla, H K and Eshwar, K E and Mace, E and Folksterma, R and Senthilvel, S and Varshney, R K and Seetha, K and Rajalakshmi, R and Prasanth, V P and Chandra, S and Swarupa, L and SriKalyani, P and Hoisington, D A (2006) Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping. BMC Bioinformatics, 7 (383). ISSN 1471-2105
Upadhyaya, H D and Baum, M and Buhariwala, H K and Udupa, S M and Furman, B J and Dwivedi, S L and Hoisington, D A and Gaur, P M and Chandra, S and Gowda, C L L and Valkoun, J (2006) Mining the chickpea composite collection for allelic variation. In: Molecular Markers for Allele Mining: Proceedings of a workshop, 22–26 August 2005, M S Swaminathan Research Foundation, Chennai, India.
Upadhyaya, H D and Bhattacharjee, R and Hoisington, D A and Chandra, S and Varshney, R K and Reddy, K N and Saxena, K B (2006) Molecular characterization of pigeonpea [Cajanus cajan (L.) Millspaugh] composite collection. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India.
Waliyar, F and Kumar, P L and Nigam, S N and Sharma, K K and Aruna, R and Hoisington, D A and Gowda, C L L (2006) Strategies for the management of aflatoxin contamination in groundnut. In: International conference on groundnut Aflatoxin management & Genomics, 5-9 Nov 2006, Guangdong, China..
Balaji, J and Crouch, J H and Petite, P V N S and Hoisington, D A (2006) A database of annotated tentative orthologs from crop abiotic stress transcripts. Bioinformation, 1 (6). pp. 225-227.
Hash, C T and Hoisington, D A and Varshney, R K and et al, . (2007) Applications of molecular markers in breeding. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh, India. (Unpublished)
Jayashree, B and Chandra, S and Hoisington, D A and Upadhyaya, H D and Hash, C T and Vadez, V and Varshney, R K and Senthilvel, S (2007) Bioinformatics platform for ICRISAT's global research needs. Documentation. International Crops Research Institute for Semi-Arid Tropics, Patancheru, Andhra Pradesh India. (Unpublished)
Gaur, P M and Srivastava, R K and Gowda, C L L and Pande, S and Sharma, H C and Sharma, K K and Vadez, V and Kashiwagi, J and Krishnamurthy, L and Varshney, R K and Hoisington, D A (2007) Breeding Chickpea for Improved Adaptation to the Semi-Arid Tropical Environments. In: Sustainable Agriculture for Food, Bio-Energy and Livelihood Security. Agrobios International.
Hoisington, D A (2007) The Center of Excellence in Genomics (CEG) for enhancing the utilization of molecular tools in breeding and research. Journal of SAT Agricultural Research, 3 (1). p. 1.
Varshney, R K and Nayak, S N and Jayashree, B and Eshwar, K and Upadhyaya, H D and Hoisington, D A (2007) Development of cost-effective SNP assays for chickpea genome analysis and breeding. Journal of SAT Agricultural Research, 3 (1). pp. 1-3. ISSN 0973-3094
Odeny, D A and Jayashree, B and Ferguson, M and Hoisington, D A and Crouch, J H and Gebhard, C (2007) Development, characterization and utilization of microsatellite markers in pigeonpea. Plant Breeding, 126 (2). pp. 130-136.
Hoisington, D A and Varshney, R K (2007) Diversity Arrays Technology (DArT) Low Cost, Generic Molecular Markers for Breeding and Research. Biotech News, 2 (1). pp. 6-8.
Vadez, V and Krishnamurthy, L and Kashiwagi, J and Kholova, J and Devi, J M and Sharma, K K and Bhatnagar-Mathur, P and Hoisington, D A and Hash, C T and Bidinger, F R and Keatinge, J D H (2007) Exploiting the functionality of root systems for dry, saline, and nutrient deficient environments in a changing climate. Journal of SAT Agricultural Research, 4 (1). pp. 1-61. ISSN 0973-3094
Varshney, R K and Horres, R and Molina, C and Nayak, S N and Jungmann, R and Swamy, P and Winter, P and Jayashree, B and Kahl, G and Hoisington, D A (2007) Extending the repertoire of microsatellite markers for genetic linkage mapping and germplasm screening in chickpea. Journal of SAT Agricultural Research, 5 (1). pp. 1-3. ISSN 0973-3094
Warburton, M L and Reif, J C and Frisch, M and Bohn, M and Bedoya, C and Xia, X C and Crossa, J and Franco, J and Hoisington, D A and Pixley, K and Taba, S and Melchinger, A E (2007) Genetic Diversity in CIMMYT Nontemperate Maize Germplasm: Landraces, Open Pollinated Varieties, and Inbred Lines. Crop Science, 48 (2). pp. 617-624. ISSN 0011-183X
Jayashree, B and Hanspal, M S and Srinivasan, R and Vigneshwaran, R and Varshney, R K and Spurthi, N and Eshwar, K and Ramesh, N and Chandra, S and Hoisington, D A (2007) An Integrated Pipeline of Open Source Software Adapted for Multi-CPU Architectures: Use in the Large-Scale Identification of Single Nucleotide Polymorphisms. Comparative and Functional Genomics (35604). pp. 1-7. ISSN 1531-6912
Vadez, V and Krishnamurthy, L and Nigam, S N and Upadhyaya, H D and Hoisington, D A and Aruna, R and Leal-Bertioli, S and Bertioli, D (2007) Large variation in gravimetric TE exists in wild and cultivated groundnut germplasm. In: Generation Challenge Programme: Annual Research Meeting, 12–16 Sep 2007, Benoni, South Africa.
Vadez, V and Krishnamurthy, L and Serraj, R and Gaur, P M and Upadhyaya, H D and Hoisington, D A and Varshney, R K and Turner, N C and Siddique, K H M (2007) Large variation in salinity tolerance in chickpea is explained by differences in sensitivity at the reproductive stage. Field Crops Research, 104 (1-3). pp. 123-129. ISSN 0378-4290
Varshney, R K and Hoisington, D A and Upadhyaya, H D and Gaur, P M and Nigam, S N and Saxena, K B and Vadez, V and Sethy, N K and Bhatia, S and Aruna, R and Gowda, M V C and Singh, N K (2007) Molecular Genetics and Breeding of Grain Legume Crops for the Semi-Arid Tropics. In: Genomics-Assisted Crop Improvement Vol 2: Genomics Applications in Crops. Springer Netherlands, Springer Netherlands, Netherlands, pp. 207-241. ISBN 978-1-4020-6296-4
Mallikarjuna, N and Jadhav, D R and Nagamani, V and Amudhavalli, C and Hoisington, D A (2007) Progress in interspecific hybridization between Cicer arietinum and wild species C. bijugum. Journal of SAT Agricultural Research, 5 (1). pp. 1-2. ISSN 0973-3094
Upadhyaya, H D and Dwivedi, S L and Baum, M and Varshney, R K and Udupa, S M and Gowda, C L L and Prasanth, V P and Furman, B J and Hoisington, D A and Chndra, S and Singh, Sube (2008) Allelic Richness and Diversity in Global Composite Collection and Reference Sets in Chickpea (Cicer Arietinum L.). In: 5th International Crop Science Congress & Exhibition, Jeju, Korea, 13-18 April 2008.
Jayashree, B and Jagadeesh, V T and Hoisington, D A (2008) CISprimerTOOL: software to implement a comparative genomics strategy for the development of conserved intron scanning (CIS) markers. Molecular Ecology Resources, 8 (3). pp. 575-577. ISSN 1755-0998
de Villiers, S and Emongor, Q and Njeri, R and Gwata, E and Hoisington, D A and Njagi, I and Silim, S and Sharma, K K (2008) Evaluation of the shoot regeneration response in tissue culture of pigeonpea (Cajanus cajan [L.] Millsp.) varieties adapted to eastern and southern Africa. African Journal of Biotechnology, 7 (5). pp. 587-590. ISSN 1684-5315
Varshney, R K and Thudi, M and Aruna, R and Nigam, S N and Neelima, K and Vadez, V and Hoisington, D A (2008) Extraordinary high allelic diversity in a groundnut (Arachis hypogaea L.) germplasm collection assayed by robust and informative SSR markers. In: Third International Conference of the Peanut Research Community On Advances in Arachis through Genomics and Biotechnology (AAGB – 2008), 4-8 November 2008, ICRISAT, Hyderabad, Andhra Pradesh, India.
Upadhyaya, H D and Dwivedi, S L and Baum, M and Varshney, R K and Udupa, S M and Gowda, C L L and Hoisington, D A and Singh, Sube (2008) Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.). BMC Plant Biology, 8 (106). pp. 1-12.
Varshney, R K and Coyne, C J and Swamy, P and Hoisington, D A (2008) Molecular identification of genetically distinct accessions in the USDA chickpea core collection. Pisum Genetics, 39. pp. 32-33. ISSN 1320-2510
Hoisington, D A and Ortiz, R (2008) Research and field monitoring on transgenic crops by the Centro Internacional de Mejoramiento de Maíz y Trigo (CIMMYT). Euphytica, 164 (3). pp. 893-902.
Upadhyaya, H D and Dwivedi, S L and Varshney, R K and Hoisington, D A and Gowda, C L L (2008) Using genetic and genomic resources to broaden the genetic base of cultivated groundnut. In: 3rd International Conference for Peanut Genomics and Biotechnology on Advances in Arachis through Genomics and Biotechnology, 4-8 November 2008, ICRISAT Patancheru, Andhra Padesh, India.
Jayashree, B and Rajagopal, S. and Hoisington, D A and Prasanth, V. P. and Chandra, S. (2008) WebStruct and VisualStruct: web interfaces and visualization for Structure software implemented in a cluster environment. Journal of Integrative Bioinformatics, 5. pp. 1-5. ISSN 1613-4516
Tatikonda, L and Wani, S P and Kannan, S and Beerelli, N and Sreedevi, T K and Hoisington, D A and Devi, P and Varshney, R K (2009) AFLP-based molecular characterization of an elite germplasm collection of Jatropha curcas L., a biofuel plant. Plant Science, 176 (4). pp. 505-513.
Varshney, R K and Pande, S and Kannan, S and Thudi, M and Sharma, M and Gaur, P M and Hoisington, D A (2009) Assessment and comparison of AFLP and SSR based molecular genetic diversity in Indian isolates of Ascochyta rabiei, a causal agent of Ascochyta blight in chickpea (Cicer arietinum L.). Mycological Progress. pp. 1-11.
Upadhyaya, H D and Dwivedi, S L and Varshney, R K and Gowda, C L L and Bhattacharjee, R and Hoisington, D A and Vadez, V (2009) Enhancing the value of legume genetic resources using core/mini core and applied genomic tools. In: International conference on Current trends in Biotechnology, 19-21 Feb. 2009, Meerut, India.
Sharma, M and Varshney, R K and Rao, J N and Kannan, S and Hoisington, D A and Pande, S (2009) Genetic diversity in Indian isolates of Fusarium oxysporum f. sp. ciceris, chickpea wilt pathogen. African Journal of Biotechnology, 8 (6). pp. 1016-1023.
Varshney, R K and Thudi, M and Aruna, R and Nigam, S N and Neelima, K and Vadez, V and Hoisington, D A (2009) High level of natural variation in a groundnut (Arachis hypogaea L.) germplasm collection assayed by selected informative SSR markers. Plant Breeding, 128 (5). pp. 486-494.
Nayak, S N and Balaji, J and Upadhyaya, H D and Hash, C T and Kishor, P B K and Chattopadhyay, D and Rodriquez, L M and Blair, M W and Baum, M and McNally, K and This, D and Hoisington, D A and Varshney, R K (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species. Plant Science, 177 (5). pp. 460-467.
Varshney, R K and Hoisington, D A and Nayak, S N and Graner, A (2009) Molecular Plant Breeding: Methodology and Achievements. In: Plant Genomics: Methods and Protocols. Methods in Molecular Biology (V 513). Humana Press, a part of Springer Science + Business Media, LLC, New York, pp. 283-304. ISBN 978-1-58829-997-0 (Print) ; 978-1-59745-427-8 (Online)
Gautami, B and Ravi, K and Narasu, M L and Hoisington, D A and Varshney, R K (2009) Novel set of groundnut SSR markers for germplasm analysis and interspecific transferability. International Journal of Integrative Biology, 7 (2). pp. 100-106.
Varshney, R K and Close, T J and Singh, N K and Hoisington, D A and Cook, D R (2009) Orphan legume crops enter the genomics era! Current Opinion in Plant Biology, 12 (2). pp. 202-210. ISSN 1369-5266
Mallikarjuna, N and Hoisington, D A (2009) Peanut improvement: production of fertile hybrids and backcross progeny between Arachis hypogaea and A. kretschmeri. Food Security, 1 (4). pp. 457-462.
Varshney, R K and Hiremath, P J and Pazhamala, L T and Kashiwagi, J and Jayashree, B and Deokar, A A and Vadez, V and Xiao, Y and Srinivasan, R and Gaur, P M and Siddique, K H M and Town, C D and Hoisington, D A (2009) A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics, 10 (523). 18p. ISSN 1471-2164
Varshney, R K and Bertioli, D J and Moretzsohn, M C and Vadez, V and Krishnamurthy, L and Aruna, R and Nigam, S N and Moss, B J and Kannan, S and Ravi, K and He, G and Knapp, S J and Hoisington, D A (2009) The first SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.). TAG Theoretical and Applied Genetics, 118 (4). pp. 729-739.
Thudi, M and Manthena, R and Wani, S P and Tatikonda, L and Hoisington, D A and Varshney, R K (2010) Analysis of Genetic Diversity in Pongamia [Pongamia pinnata (L)Pierrre] using AFLP Markers. Journal of Plant Biochemistry and Biotechnlogy, 19 (2). pp. 209-216.
Ravi, K and Upadhyaya, H D and Dwivedi, S L and Hoisington, D A and Varshney, R K (2010) Genetic relationships among seven sections of genus Arachis studied by using SSR markers. BMC Plant Biology, 10 (15). pp. 1-12.
Nayak, S N and Zhu, H and Varghese, N and Datta, S and Choi, H K and Horres, R and Jüngling, R and Singh, J and Kavi Kishor, P B and Sivaramakrishnan, S and Hoisington, D A and Khal, G and Winter, P and Cook, D R and Varshney, R K (2010) Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome. TAG Theoretical and Applied Genetics, 120 (7). pp. 1415-1441.
Nayak, S N and Zhu, H and Varghese, N and Datta, S and Choi, H K and Horres, R and Jüngling, R and Singh, J and Kavi Kishor, P B and Sivaramakrishnan, S and Hoisington, D A and Kahl, G and Winter, P and Cook, D R and Varshney, R K (2010) Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome. Theoretical and Applied Genetics, 120 (7). pp. 1415-1441. ISSN 0040-5752
Saxena, R K and Prathima, C and Saxena, K B and Hoisington, D A and Singh, N K and Varshney, R K (2010) Novel SSR Markers for Polymorphism Detection in Pigeonpea (Cajanus spp.). Plant Breeding, 129 (2). pp. 142-148.
Saxena, R K and Saxena, K B and Kumar, R V and Hoisington, D A and Varshney, R K (2010) Simple sequence repeat-based diversity in elite pigeonpea genotypes for developing mapping populations to map resistance to Fusarium wilt and sterility mosaic disease. Plant Breeding, 129. pp. 135-141. ISSN 0179-9541
Thudi, M and Senthilvel, S and Bottley, A and Hash, C T and Reddy, A R and Feltus, A F and Paterson, A H and Hoisington, D A and Varshney, R K (2010) A comparative assessment of the utility of PCR-based marker systems in pearl millet. Euphytica, 174 (2). pp. 253-260. ISSN 0014-2336
Mallikarjuna, N and Senthilvel, S and Hoisington, D A (2011) Development of new sources of tetraploid Arachis to broaden the genetic base of cultivated groundnut (Arachis hypogaea L.). Genetic Resources and Crop Evolution, 58 (6). pp. 889-907.
Varshney, R K and Pazhamala, L T and Kashiwagi, J and Gaur, P M and Krishnamurthy, L and Hoisington, D A (2011) Genomics and Physiological Approaches for Root Trait Breeding to Improve Drought Tolerance in Chickpea (Cicer arietinum L.). In: Root Genomics. Springer, Germany, pp. 233-250. ISBN 9783540855453
Mugo, S N and Mwimali, M and Taracha, C O and Songa, J M and Gichuki, S T and Tende, R and Karaya, H and Pellegrineschi, A and Hoisington, D A (2011) Testing public Bt maize events for control of stem borers in the first confined field trials in Kenya. African Journal of Biochemistry Research, 10 (23). pp. 4713-4718.
de Villiers, S M and Hoisington, D A (2011) The trends and future of biotechnology crops for insect pest control. African Journal of Biotechnology, 10 (23). pp. 4677-4681. ISSN 1684-5315
Gautami, B and Fonce´ka, D and Pandey, M K and Sujay, V and Bhanuprakash, A and Shah, T and Nigam, S N and Hoisington, D A and Varshney, R K and et al, . (2012) An International Reference Consensus Genetic Map with 897 Marker Loci Based on 11 Mapping Populations for Tetraploid Groundnut (Arachis hypogaea L.). Plos ONE-Biotechnology, 7 (7). pp. 1-11.
Gautami, B and Pandey, M K and Vadez, V and Nigam, S N and Ratnakumar, P and Krishnamurthy, L and Radhakrishnan, T and Gowda, M V C and Narasu, M L and Hoisington, D A and Knapp, S J and Varshney, R K (2012) Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.). Molecular Breeding, 30 (2). pp. 757-772. ISSN 1572-9788
van Ginkel, M and Sayer, J and Sinclair, F and Aw-Hassan, A and Bossio, D and Craufurd, P Q and El Mourid, M and Haddad, N and Hoisington, D A and Johnson, N and León Velarde, C and Mares, V and Mude, A and Nefzaoui, A and Noble, A and Rao, K P C and Serraj, R and Tarawali, S and Vodouhe, R and Ortiz, R (2013) An integrated agro-ecosystem and livelihood systems approach for the poor and vulnerable in dry areas. Food Security, 5. pp. 751-767. ISSN 1876-4525
Mohammed, A and Chala, A and Ojiewo, C O and Dejene, M and Fininsa, C and Ayalew, A and Hoisington, D A and Sobolev, V S and Arias, R S (2018) Integrated management of Aspergillus species and aflatoxin production in groundnut (Arachis hypogaea L.) through application of farm yard manure and seed treatments with fungicides and Trichoderma species. African Journal of Plant Science, 12 (9). pp. 196-207. ISSN 1996-0824
Achola, E and Wasswa, P and Fonceka, D and Clevenger, J P and Bajaj, P and Ozias‑Akins, P and Rami, J and Deom, C M and Hoisington, D A and Edema, R and Odeny, D A and Okello, D K (2023) Genome‑wide association studies reveal novel loci for resistance to groundnut rosette disease in the African core groundnut collection. Theoretical and Applied Genetics, 136. pp. 1-20. ISSN 1432-2242