"11615","9","archive","3170",,,"disk0/00/01/16/15","2020-09-08 06:13:53","2022-04-04 04:31:32","2020-09-08 06:13:53","article",,,"show",,,,"","","","","","","","","","",,,,"Liu","H","","","","","","","Varshney","R K","","","","",,,,,"","",,,,,"","","1Guangdong Provincial Key Laboratory of Crop Genetic Improvement, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GDAAS), Guangzhou","China","Global transcriptome analysis of subterranean pod and seed in peanut (Arachis hypogaea L.) unravels the complexity of fruit development under dark condition","pub","s1.3","CRPS3","","public",,,"Groundnut, Genetics, Genomics",,"This study was subsidized by the Key-Area Research and Development Program of Guangdong Province
(2020B020219003), National Natural Science Foundation of China (31771841, 31801401), Guangdong Basic
and Applied Basic Research Foundation (2020A1515010021), National Key Research and Development Program
(2018YFD0201009), Science and Technology Program of Guangzhou (201904010190), Open Fund of
Guangdong Key Laboratory of Crop Genetic Improvement (2017B030314090), Natural Science Foundation
of Guangdong Province (2017A030311007), Modern Agroindustry Technology Research System (CARS-13),
Teamwork Projects Fund of Guangdong Natural Science Foundation (2017A030312004), Technology Special
Fund of Guangdong Province Agriculture and Rural Affairs Department (2019KJ136-02), Special Fund for
Scientific Innovation Strategy-Construction of High Level Academy of Agriculture Science (R2016PY-JX001,
R2017YJ-YB2001, R2018PY-JX001, R2018QD-049, R2018QD-050, R2019PY-QF006).","Peanut pods develop underground, which is the most salient characteristic in peanut. However, its
developmental transcriptome remains largely unknown. In the present study, we sequenced over
one billion transcripts to explore the developmental transcriptome of peanut pod using Illumina
sequencing. Moreover, we identified and quantified the abundances of 165,689 transcripts in seed
and shell tissues along with a pod developmental gradient. The dynamic changes of differentially
expressed transcripts (DETs) were described in seed and shell. Additionally, we found that
photosynthetic genes were not only pronouncedly enriched in aerial pod, but also played roles in
developing pod under dark condition. Genes functioning in photomorphogenesis showed distinct
expression profiles along subterranean pod development. Clustering analysis unraveled a dynamic
transcriptome, in which transcripts for DNA synthesis and cell division during pod expansion were
transitioning to transcripts for cell expansion and storage activity during seed filling. Collectively, our
study formed a transcriptional baseline for peanut fruit development under dark condition.","2020-08","published",,"Scientific Reports (TSI)","10","1","NATURE PUBLISHING GROUP",,"1-12",,,,,,"doi:10.1038/s41598-020-69943-7",,,,,"TRUE",,"2045-2322",,,,,,"","https://doi.org/10.1038/s41598-020-69943-7","","",,"","",,,,,,"",,,,,,,"",,,,,"",,,,,"","",,,,,"","",,,,,
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"11615",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Liu","H","","",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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"11615",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Varshney","R K","","",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
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"11615",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Chen","X","","",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,