eprintid: 11505
rev_number: 15
eprint_status: archive
userid: 3170
dir: disk0/00/01/15/05
datestamp: 2020-05-15 09:08:28
lastmod: 2020-05-15 09:08:28
status_changed: 2020-05-15 09:08:28
type: article
metadata_visibility: show
creators_name: Pandey, M K
creators_name: Pandey, A K
creators_name: Kumar, R
creators_name: Nwosu, C V
creators_name: Guo, B
creators_name: Wright, G C
creators_name: Bhat, R S
creators_name: Chen, X
creators_name: Bera, S K
creators_name: Yuan, M
creators_name: Jiang, H
creators_name: Faye, I
creators_name: Radhakrishnan, T
creators_name: Wang, X
creators_name: Liang, X
creators_name: Liao, B
creators_name: Zhang, X
creators_name: Varshney, R K
creators_name: Zhuang, W
icrisatcreators_name: Pandey, M K
icrisatcreators_name: Pandey, A K
icrisatcreators_name: Varshney, R K
affiliation: ICRISAT (Patancheru)
affiliation: University of Southern Queensland (USQ), Toowoomba, Australia
affiliation: Central University of Karnataka, Gulbarga, India
affiliation: Mars-Wrigley, Chicago, USA
affiliation: Crop Protection and Management Research Unit, United State Department of Agriculture – Agricultural Research Service (USDA-ARS), Tifton, USA
affiliation: Peanut Company of Australia (PCA), Kingaroy, Australia
affiliation: University of Agricultural Sciences (UAS), Dharwad, India
affiliation: Crops Research Institute (CRI), Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, China
affiliation: ICAR-Directorate of Groundnut Research (DGR), Junagadh
affiliation: Shandong Peanut Research Institute (SPRI), Qingdao, China
affiliation: Oil Crops Research Institute (OCRI), Chinese Academy of Agricultural Sciences (CAAS), Wuhan, China
affiliation: Institut Sénégalais de Recherches Agricoles (ISRA)-Centre National de Recherches Agronomiques (CNRA), Bambey, Senegal
affiliation: Biotechnology Research Center, Shandong Academy of Agricultural Sciences (SAAS), Jinan, China
affiliation: Henan Academy of Agricultural Sciences (HAAS), Zhenzhou, China
affiliation: Institute of Oil Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China
country: India
country: Australia
country: USA
country: China
country: Senegal
title: Translational genomics for achieving higher genetic gains in groundnut
ispublished: pub
subjects: s1.3
subjects: s2.12
subjects: s2.13
subjects: s2.17
divisions: CRPS3
crps: CG1
full_text_status: public
keywords: Groundnut, Genomics
note: The authors are thankful to Bill & Melinda Gates
Foundation (Tropical Legumes III); Department of Biotechnology
(DBT) of Government of India; National Agricultural Science Fund (NASF) of Indian Council of Agricultural Research, India; World
Bank-assisted Karnataka Watershed Development Project-II (KWDPII)
funded by Government of Karnataka (GoK), India; MARS-Wrigley
Inc., USA; and National Natural Science Foundation (NSF) of China
(U1705233 to W. Z.). The work reported in this article was undertaken
as a part of the CGIAR Research Program on Grain Legumes and Dryland
Cereals (GLDC). ICRISAT is a member of the CGIAR.
abstract: Cultivated groundnut or peanut (Arachis hypogaea), an allopolyploid oilseed crop with a large and complex genome,
is one of the most nutritious food. This crop is grown in more than 100 countries, and the low productivity has remained
the biggest challenge in the semiarid tropics. Recently, the groundnut research community has witnessed fast progress and
achieved several key milestones in genomics research including genome sequence assemblies of wild diploid progenitors,
wild tetraploid and both the subspecies of cultivated tetraploids, resequencing of diverse germplasm lines, genome-wide
transcriptome atlas and cost-effective high and low-density genotyping assays. These genomic resources have enabled
high-resolution trait mapping by using germplasm diversity panels and multi-parent genetic populations leading to precise
gene discovery and diagnostic marker development. Furthermore, development and deployment of diagnostic markers have
facilitated screening early generation populations as well as marker-assisted backcrossing breeding leading to development
and commercialization of some molecular breeding products in groundnut. Several new genomics applications/technologies
such as genomic selection, speed breeding, mid-density genotyping assay and genome editing are in pipeline. The integration
of these new technologies hold great promise for developing climate-smart, high yielding and more nutritious groundnut
varieties in the post-genome era.
date: 2020-04
date_type: published
publication: Theoretical and Applied Genetics (TSI)
volume: 133
number: 5
publisher: Springer Verlag
pagerange: 1679-1702
id_number: doi:10.1007/s00122-020-03592-2
refereed: TRUE
issn: 0040-5752
official_url: https://doi.org/10.1007/s00122-020-03592-2
related_url_url: https://scholar.google.com/scholar?hl=en&as_sdt=0%2C5&q=10.1007%2Fs00122-020-03592-2&btnG=
funders: Bill & Melinda Gates Foundation
projects: Tropical Legumes III
citation:   Pandey, M K and Pandey, A K and Kumar, R and Nwosu, C V and Guo, B and Wright, G C and Bhat, R S and Chen, X and Bera, S K and Yuan, M and Jiang, H and Faye, I and Radhakrishnan, T and Wang, X and Liang, X and Liao, B and Zhang, X and Varshney, R K and Zhuang, W  (2020) Translational genomics for achieving higher genetic gains in groundnut.  Theoretical and Applied Genetics (TSI), 133 (5).  pp. 1679-1702.  ISSN 0040-5752     
document_url: http://oar.icrisat.org/11505/1/s00122-020-03592-2.pdf